RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ZNF506Q5JVG8 444 aa17.37■□□□□ 0.37
TSPAN4-203ENST00000397397 TMEM78Q5T7P6 136 aa17.37■□□□□ 0.37
TSPAN4-203ENST00000397397 C9orf47Q6ZRZ4 202 aa17.37■□□□□ 0.37
TSPAN4-203ENST00000397397 LINC00477Q96M19 166 aa17.37■□□□□ 0.37
TSPAN4-203ENST00000397397 CLUHP3Q96NS8 147 aa17.37■□□□□ 0.37
TSPAN4-203ENST00000397397 EIF5A2Q9GZV4 153 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-203ENST00000397397 SCO2A0A1W2PP80 73 aa17.36■□□□□ 0.37
TSPAN4-203ENST00000397397 A8MTW9 85 aa17.36■□□□□ 0.37
TSPAN4-203ENST00000397397 FRMD6-AS1P0C7T7 363 aa17.36■□□□□ 0.37
TSPAN4-203ENST00000397397 CT45A10P0DMU9 189 aa17.35■□□□□ 0.37
TSPAN4-203ENST00000397397 TRAV8-1A0A0A6YYK1 113 aa17.34■□□□□ 0.37
TSPAN4-203ENST00000397397 AMTNQ6UX39 209 aa17.34■□□□□ 0.37
TSPAN4-203ENST00000397397 LINC00322Q6ZN03 302 aaPredicted RBP17.34■□□□□ 0.37
TSPAN4-203ENST00000397397 SGK494Q96LW2 274 aa17.34■□□□□ 0.37
TSPAN4-203ENST00000397397 SLC35B3Q9H1N7 401 aa17.34■□□□□ 0.37
TSPAN4-203ENST00000397397 PDE6DO43924 150 aa17.33■□□□□ 0.36
TSPAN4-203ENST00000397397 AKR1C3P42330 323 aa17.33■□□□□ 0.36
TSPAN4-203ENST00000397397 ZNF138P52744 262 aa17.33■□□□□ 0.36
TSPAN4-203ENST00000397397 FXYD7P58549 80 aa17.33■□□□□ 0.36
TSPAN4-203ENST00000397397 MORN3Q6PF18 240 aaPredicted RBP17.33■□□□□ 0.36
TSPAN4-203ENST00000397397 Q8TAT8 98 aa17.33■□□□□ 0.36
TSPAN4-203ENST00000397397 LINC00479Q96M42 142 aa17.33■□□□□ 0.36
TSPAN4-203ENST00000397397 TRAV34A0A0B4J273 112 aa17.32■□□□□ 0.36
TSPAN4-203ENST00000397397 APOC4P55056 127 aa17.32■□□□□ 0.36
TSPAN4-203ENST00000397397 NUTF2P61970 127 aaKnown RBP17.32■□□□□ 0.36
TSPAN4-203ENST00000397397 TMEM75Q8N9X5 138 aa17.32■□□□□ 0.36
TSPAN4-203ENST00000397397 CSTL1Q9H114 145 aa17.32■□□□□ 0.36
TSPAN4-203ENST00000397397 ZNF492Q9P255 531 aa17.32■□□□□ 0.36
TSPAN4-203ENST00000397397 KIR2DL5BA0A0G2JN68 375 aa17.31■□□□□ 0.36
TSPAN4-203ENST00000397397 KIR2DL5BA0A0G2JPC4 375 aa17.31■□□□□ 0.36
TSPAN4-203ENST00000397397 KIR2DL5AQ8N109 375 aa17.31■□□□□ 0.36
TSPAN4-203ENST00000397397 KIR2DL5BQ8NHK3 375 aa17.31■□□□□ 0.36
TSPAN4-203ENST00000397397 C11orf52Q96A22 123 aa17.31■□□□□ 0.36
TSPAN4-203ENST00000397397 ODF3Q96PU9 254 aa17.31■□□□□ 0.36
TSPAN4-203ENST00000397397 ASCL2Q99929 193 aa17.31■□□□□ 0.36
TSPAN4-203ENST00000397397 PSG8Q9UQ74 426 aa17.31■□□□□ 0.36
TSPAN4-203ENST00000397397 IGLV2-11P01706 119 aa17.3■□□□□ 0.36
TSPAN4-203ENST00000397397 FLI1Q01543 452 aaPredicted RBP17.3■□□□□ 0.36
TSPAN4-203ENST00000397397 SPINK13Q1W4C9 94 aa17.3■□□□□ 0.36
TSPAN4-203ENST00000397397 C2CD4CQ8TF44 421 aa17.3■□□□□ 0.36
TSPAN4-203ENST00000397397 MED9Q9NWA0 146 aa17.3■□□□□ 0.36
TSPAN4-203ENST00000397397 FBLL1A6NHQ2 334 aaKnown RBP17.3■□□□□ 0.36
TSPAN4-203ENST00000397397 M0R2Z0 102 aa17.3■□□□□ 0.36
TSPAN4-203ENST00000397397 CA1P00915 261 aaPredicted RBP17.3■□□□□ 0.36
TSPAN4-203ENST00000397397 TSPOP30536 169 aa17.3■□□□□ 0.36
TSPAN4-203ENST00000397397 LEPP41159 167 aa17.3■□□□□ 0.36
TSPAN4-203ENST00000397397 UBE2G1P62253 170 aa17.3■□□□□ 0.36
TSPAN4-203ENST00000397397 PRNTQ86SH4 94 aa17.3■□□□□ 0.36
TSPAN4-203ENST00000397397 FMC1Q96HJ9 113 aa17.3■□□□□ 0.36
TSPAN4-203ENST00000397397 PEA15Q15121 130 aa17.29■□□□□ 0.36
TSPAN4-203ENST00000397397 FAM19A4Q96LR4 140 aa17.29■□□□□ 0.36
TSPAN4-203ENST00000397397 XCL2Q9UBD3 114 aa17.29■□□□□ 0.36
TSPAN4-203ENST00000397397 KLF12Q9Y4X4 402 aa17.29■□□□□ 0.36
TSPAN4-203ENST00000397397 S100A9P06702 114 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-203ENST00000397397 TMEM183BQ1AE95 376 aa17.28■□□□□ 0.36
TSPAN4-203ENST00000397397 LENEPQ9Y5L5 61 aa17.28■□□□□ 0.36
TSPAN4-203ENST00000397397 J3KRW8 73 aa17.27■□□□□ 0.35
TSPAN4-203ENST00000397397 AMBPP02760 352 aa17.27■□□□□ 0.35
TSPAN4-203ENST00000397397 GIG44P09565 113 aaPredicted RBP17.27■□□□□ 0.35
TSPAN4-203ENST00000397397 CDKN1BP46527 198 aa17.27■□□□□ 0.35
TSPAN4-203ENST00000397397 SRSF3P84103 164 aaKnown RBP17.27■□□□□ 0.35
TSPAN4-203ENST00000397397 Q86TA4 180 aa17.27■□□□□ 0.35
TSPAN4-203ENST00000397397 NDFIP1Q9BT67 221 aa17.27■□□□□ 0.35
TSPAN4-203ENST00000397397 TRAV12-2A0A075B6T6 113 aa17.26■□□□□ 0.35
TSPAN4-203ENST00000397397 TMEM250H0YL14 139 aa17.26■□□□□ 0.35
TSPAN4-203ENST00000397397 UBE2CO00762 179 aa17.26■□□□□ 0.35
TSPAN4-203ENST00000397397 RPL35P42766 123 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-203ENST00000397397 TVP23CQ96ET8 276 aa17.26■□□□□ 0.35
TSPAN4-203ENST00000397397 DERL1Q9BUN8 251 aa17.26■□□□□ 0.35
TSPAN4-203ENST00000397397 C1QTNF4Q9BXJ3 329 aa17.26■□□□□ 0.35
TSPAN4-203ENST00000397397 TRBV7-9A0A0J9YWB2 115 aa17.25■□□□□ 0.35
TSPAN4-203ENST00000397397 TRBV6-1A0A0K0K1D8 114 aa17.25■□□□□ 0.35
TSPAN4-203ENST00000397397 RAB19A4D1S5 217 aa17.25■□□□□ 0.35
TSPAN4-203ENST00000397397 NDUFS6O75380 124 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-203ENST00000397397 SRP19P09132 144 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-203ENST00000397397 CRISP2P16562 243 aa17.25■□□□□ 0.35
TSPAN4-203ENST00000397397 CEBPGP53567 150 aa17.25■□□□□ 0.35
TSPAN4-203ENST00000397397 TREM1Q9NP99 234 aa17.25■□□□□ 0.35
TSPAN4-203ENST00000397397 GPX1P07203 203 aa17.24■□□□□ 0.35
TSPAN4-203ENST00000397397 KIR3DS1Q14943 382 aa17.24■□□□□ 0.35
TSPAN4-203ENST00000397397 SBSPONQ8IVN8 264 aa17.24■□□□□ 0.35
TSPAN4-203ENST00000397397 ZFAND2AQ8N6M9 145 aa17.24■□□□□ 0.35
TSPAN4-203ENST00000397397 CRXO43186 299 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-203ENST00000397397 TAS2R60P59551 318 aa17.23■□□□□ 0.35
TSPAN4-203ENST00000397397 SAPCD1Q5SSQ6 148 aa17.23■□□□□ 0.35
TSPAN4-203ENST00000397397 IGF2BP2-AS1Q96M15 143 aa17.23■□□□□ 0.35
TSPAN4-203ENST00000397397 C8orf49Q96NF6 230 aa17.23■□□□□ 0.35
TSPAN4-203ENST00000397397 SMDT1Q9H4I9 107 aa17.23■□□□□ 0.35
TSPAN4-203ENST00000397397 KLLNB2CW77 178 aa17.22■□□□□ 0.35
TSPAN4-203ENST00000397397 C9JQL5 133 aa17.22■□□□□ 0.35
TSPAN4-203ENST00000397397 INSP01308 110 aa17.22■□□□□ 0.35
TSPAN4-203ENST00000397397 RNASE4P34096 147 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-203ENST00000397397 GFI1BQ5VTD9 330 aa17.22■□□□□ 0.35
TSPAN4-203ENST00000397397 ZFP30Q9Y2G7 519 aa17.22■□□□□ 0.35
TSPAN4-203ENST00000397397 LINC00862A6NCI5 91 aa17.21■□□□□ 0.35
TSPAN4-203ENST00000397397 LTAP01374 205 aa17.21■□□□□ 0.35
TSPAN4-203ENST00000397397 ZNF674Q2M3X9 581 aa17.21■□□□□ 0.35
TSPAN4-203ENST00000397397 DEFB135Q30KP9 77 aa17.21■□□□□ 0.35
TSPAN4-203ENST00000397397 PRR9Q5T870 116 aa17.21■□□□□ 0.35
TSPAN4-203ENST00000397397 BTN1A1Q13410 526 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms