RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 C2orf66Q6UXQ4 117 aa12.4□□□□□ -0.42
GNE-202ENST00000396594 ASCC3Q8N3C0 2202 aaKnown RBP12.4□□□□□ -0.42
GNE-202ENST00000396594 CITED1Q99966 193 aa12.39□□□□□ -0.43
GNE-202ENST00000396594 ZNF491Q8N8L2 437 aa12.39□□□□□ -0.43
GNE-202ENST00000396594 IGLC7A0M8Q6 106 aa12.39□□□□□ -0.43
GNE-202ENST00000396594 INSL3P51460 131 aa12.39□□□□□ -0.43
GNE-202ENST00000396594 MYLKQ15746 1914 aa12.39□□□□□ -0.43
GNE-202ENST00000396594 ZNF503-AS2A6NEH8 195 aa12.39□□□□□ -0.43
GNE-202ENST00000396594 MYCNOSP40205 109 aa12.39□□□□□ -0.43
GNE-202ENST00000396594 ST6GALNAC6Q969X2 333 aa12.38□□□□□ -0.43
GNE-202ENST00000396594 SMIM2Q9BVW6 85 aa12.38□□□□□ -0.43
GNE-202ENST00000396594 ZC2HC1BQ5TFG8 222 aa12.38□□□□□ -0.43
GNE-202ENST00000396594 C16orf74Q96GX8 76 aa12.38□□□□□ -0.43
GNE-202ENST00000396594 SPANXCQ9NY87 97 aa12.38□□□□□ -0.43
GNE-202ENST00000396594 V9GYV3 84 aa12.38□□□□□ -0.43
GNE-202ENST00000396594 C11orf44Q8N8P7 122 aa12.38□□□□□ -0.43
GNE-202ENST00000396594 LYPD6BQ8NI32 183 aa12.38□□□□□ -0.43
GNE-202ENST00000396594 UBE2E2Q96LR5 201 aa12.38□□□□□ -0.43
GNE-202ENST00000396594 MDC1Q14676 2089 aaKnown RBP12.37□□□□□ -0.43
GNE-202ENST00000396594 IGHV4-39P01824 125 aa12.37□□□□□ -0.43
GNE-202ENST00000396594 HERV-K104P63124 156 aa12.37□□□□□ -0.43
GNE-202ENST00000396594 C18orf32Q8TCD1 76 aa12.37□□□□□ -0.43
GNE-202ENST00000396594 TRAV13-2A0A0B4J235 113 aa12.37□□□□□ -0.43
GNE-202ENST00000396594 HLA-DRB4P13762 266 aa12.37□□□□□ -0.43
GNE-202ENST00000396594 EDA2RQ9HAV5 297 aa12.37□□□□□ -0.43
GNE-202ENST00000396594 TP53TG1Q9Y2A0 90 aa12.37□□□□□ -0.43
GNE-202ENST00000396594 HLA-DRB4X5D2U9 266 aa12.37□□□□□ -0.43
GNE-202ENST00000396594 C16orf54Q6UWD8 224 aa12.36□□□□□ -0.43
GNE-202ENST00000396594 ZNF581Q9P0T4 197 aa12.36□□□□□ -0.43
GNE-202ENST00000396594 SDHAF1A6NFY7 115 aa12.36□□□□□ -0.43
GNE-202ENST00000396594 KLF5Q13887 457 aaPredicted RBP12.36□□□□□ -0.43
GNE-202ENST00000396594 CRYGCP07315 174 aa12.35□□□□□ -0.43
GNE-202ENST00000396594 UTF1Q5T230 341 aa12.35□□□□□ -0.43
GNE-202ENST00000396594 SIGMAR1Q99720 223 aa12.35□□□□□ -0.43
GNE-202ENST00000396594 G3V318 75 aa12.35□□□□□ -0.43
GNE-202ENST00000396594 ANXA2RQ3ZCQ2 193 aa12.35□□□□□ -0.43
GNE-202ENST00000396594 TRAV8-1A0A0A6YYK1 113 aa12.35□□□□□ -0.43
GNE-202ENST00000396594 GFI1BQ5VTD9 330 aa12.35□□□□□ -0.43
GNE-202ENST00000396594 VWC2LB2RUY7 222 aa12.35□□□□□ -0.43
GNE-202ENST00000396594 IL17DQ8TAD2 202 aa12.35□□□□□ -0.43
GNE-202ENST00000396594 IGLV11-55A0A075B6I3 123 aa12.34□□□□□ -0.43
GNE-202ENST00000396594 F5H768 121 aa12.34□□□□□ -0.43
GNE-202ENST00000396594 IGKV3D-20A0A0C4DH25 116 aa12.34□□□□□ -0.43
GNE-202ENST00000396594 SPINK13Q1W4C9 94 aa12.34□□□□□ -0.43
GNE-202ENST00000396594 SNAI2O43623 268 aa12.34□□□□□ -0.43
GNE-202ENST00000396594 SSBP2P81877 361 aaPredicted RBP12.34□□□□□ -0.43
GNE-202ENST00000396594 MRPL51Q4U2R6 128 aaKnown RBP12.34□□□□□ -0.43
GNE-202ENST00000396594 C2orf82Q6UX34 121 aa12.34□□□□□ -0.43
GNE-202ENST00000396594 GATD1Q8NB37 220 aa12.34□□□□□ -0.43
GNE-202ENST00000396594 CTSZQ9UBR2 303 aa12.34□□□□□ -0.43
GNE-202ENST00000396594 CCL24O00175 119 aa12.33□□□□□ -0.44
GNE-202ENST00000396594 LY6HO94772 140 aa12.33□□□□□ -0.44
GNE-202ENST00000396594 PRSS47A8MTI9 375 aa12.33□□□□□ -0.44
GNE-202ENST00000396594 F8VRH5 84 aa12.33□□□□□ -0.44
GNE-202ENST00000396594 DEFB112Q30KQ8 113 aa12.33□□□□□ -0.44
GNE-202ENST00000396594 Q6ZVH6 145 aa12.33□□□□□ -0.44
GNE-202ENST00000396594 NKAPP1Q8N9T2 125 aa12.33□□□□□ -0.44
GNE-202ENST00000396594 XCL2Q9UBD3 114 aa12.33□□□□□ -0.44
GNE-202ENST00000396594 LAMTOR3Q9UHA4 124 aa12.33□□□□□ -0.44
GNE-202ENST00000396594 GPHB5Q86YW7 130 aa12.33□□□□□ -0.44
GNE-202ENST00000396594 A0A087WWL8 130 aa12.32□□□□□ -0.44
GNE-202ENST00000396594 DEFB130BP0DP73 79 aa12.32□□□□□ -0.44
GNE-202ENST00000396594 DEFB130AP0DP74 79 aa12.32□□□□□ -0.44
GNE-202ENST00000396594 SVILO95425 2214 aa12.32□□□□□ -0.44
GNE-202ENST00000396594 A0A087X0K7 114 aa12.32□□□□□ -0.44
GNE-202ENST00000396594 LOXL1Q08397 574 aaPredicted RBP12.32□□□□□ -0.44
GNE-202ENST00000396594 PRSS57Q6UWY2 283 aa12.32□□□□□ -0.44
GNE-202ENST00000396594 LINC00574Q9H8X3 128 aa12.32□□□□□ -0.44
GNE-202ENST00000396594 ZDBF2Q9HCK1 2354 aa12.32□□□□□ -0.44
GNE-202ENST00000396594 RPL32P62910 135 aaKnown RBP12.31□□□□□ -0.44
GNE-202ENST00000396594 TRAV13-1A0A0B4J241 112 aa12.31□□□□□ -0.44
GNE-202ENST00000396594 IGHV3-53P01767 116 aa12.31□□□□□ -0.44
GNE-202ENST00000396594 MLANAQ16655 118 aa12.31□□□□□ -0.44
GNE-202ENST00000396594 BRWD1Q9NSI6 2320 aa12.31□□□□□ -0.44
GNE-202ENST00000396594 SPTA1P02549 2419 aa12.31□□□□□ -0.44
GNE-202ENST00000396594 I3L2K1 104 aa12.31□□□□□ -0.44
GNE-202ENST00000396594 C8orf49Q96NF6 230 aa12.31□□□□□ -0.44
GNE-202ENST00000396594 HOXD3P31249 432 aaPredicted RBP12.31□□□□□ -0.44
GNE-202ENST00000396594 ZNF726P1Q15940 193 aa12.31□□□□□ -0.44
GNE-202ENST00000396594 GAGE12JA6NER3 117 aa12.31□□□□□ -0.44
GNE-202ENST00000396594 GAGE1Q13065 139 aa12.31□□□□□ -0.44
GNE-202ENST00000396594 GAGE4Q13068 117 aa12.31□□□□□ -0.44
GNE-202ENST00000396594 GAGE5Q13069 117 aa12.31□□□□□ -0.44
GNE-202ENST00000396594 DAZ2Q13117 558 aaKnown RBP12.31□□□□□ -0.44
GNE-202ENST00000396594 DAZ4Q86SG3 579 aaKnown RBP12.31□□□□□ -0.44
GNE-202ENST00000396594 DAZ3Q9NR90 486 aaKnown RBP12.31□□□□□ -0.44
GNE-202ENST00000396594 IGHV3-73A0A0B4J1V6 119 aa12.3□□□□□ -0.44
GNE-202ENST00000396594 FXYD7P58549 80 aa12.3□□□□□ -0.44
GNE-202ENST00000396594 FNDC4Q9H6D8 234 aaPredicted RBP12.3□□□□□ -0.44
GNE-202ENST00000396594 IFITM1P13164 125 aa12.3□□□□□ -0.44
GNE-202ENST00000396594 GAGE2EQ4V326 116 aa12.3□□□□□ -0.44
GNE-202ENST00000396594 STPG4Q8N801 248 aa12.3□□□□□ -0.44
GNE-202ENST00000396594 GAGE2DQ9UEU5 116 aa12.3□□□□□ -0.44
GNE-202ENST00000396594 ADORA2A-AS1P86434 159 aa12.3□□□□□ -0.44
GNE-202ENST00000396594 LYPD6Q86Y78 171 aa12.3□□□□□ -0.44
GNE-202ENST00000396594 CACNA1IQ9P0X4 2223 aa12.29□□□□□ -0.44
GNE-202ENST00000396594 RP1P56715 2156 aa12.29□□□□□ -0.44
GNE-202ENST00000396594 SOCS3O14543 225 aa12.29□□□□□ -0.44
GNE-202ENST00000396594 C4orf3Q8WVX3 66 aa12.29□□□□□ -0.44
GNE-202ENST00000396594 ODF3Q96PU9 254 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms