RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 FXYD5Q96DB9 178 aa11.25□□□□□ -0.61
CXCL12-206ENST00000395795 WDR61Q9GZS3 305 aaKnown RBP11.25□□□□□ -0.61
CXCL12-206ENST00000395795 MED28Q9H204 178 aa11.25□□□□□ -0.61
CXCL12-206ENST00000395795 CRISP2P16562 243 aa11.24□□□□□ -0.61
CXCL12-206ENST00000395795 DAZ2Q13117 558 aaKnown RBP11.24□□□□□ -0.61
CXCL12-206ENST00000395795 CLINT1Q14677 625 aa11.24□□□□□ -0.61
CXCL12-206ENST00000395795 LRRC37A5PQ49AS3 106 aa11.24□□□□□ -0.61
CXCL12-206ENST00000395795 C9orf47Q6ZRZ4 202 aa11.24□□□□□ -0.61
CXCL12-206ENST00000395795 VGLL1Q99990 258 aa11.24□□□□□ -0.61
CXCL12-206ENST00000395795 LINC00467Q9BRT7 94 aa11.24□□□□□ -0.61
CXCL12-206ENST00000395795 IGKV2-40A0A087WW87 121 aaPredicted RBP11.23□□□□□ -0.61
CXCL12-206ENST00000395795 NUDT3O95989 172 aa11.23□□□□□ -0.61
CXCL12-206ENST00000395795 IGKV2D-40P01614 121 aaPredicted RBP11.23□□□□□ -0.61
CXCL12-206ENST00000395795 SLC25A5P05141 298 aaKnown RBP11.23□□□□□ -0.61
CXCL12-206ENST00000395795 CYCSP99999 105 aaKnown RBP11.23□□□□□ -0.61
CXCL12-206ENST00000395795 BTN1A1Q13410 526 aa11.23□□□□□ -0.61
CXCL12-206ENST00000395795 Q6ZTI0 123 aa11.23□□□□□ -0.61
CXCL12-206ENST00000395795 BLNKQ8WV28 456 aa11.23□□□□□ -0.61
CXCL12-206ENST00000395795 PPP1R1CQ8WVI7 109 aa11.23□□□□□ -0.61
CXCL12-206ENST00000395795 PYGO2Q9BRQ0 406 aa11.23□□□□□ -0.61
CXCL12-206ENST00000395795 PRELID1Q9Y255 219 aa11.23□□□□□ -0.61
CXCL12-206ENST00000395795 TRAV26-1A0A087WT03 109 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 NBDYA0A0U1RRE5 68 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 GAGE12BA1L429 117 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 C7orf71A4D174 169 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 GAGE7O76087 117 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 GAGE12FP0CL80 117 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 GAGE12GP0CL81 117 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 GAGE12IP0CL82 117 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 ICAM4Q14773 271 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 C1orf134Q5TEV5 83 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 Q6ZNX1 250 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 LINC00477Q96M19 166 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 KRTAP1-5Q9BYS1 174 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 SLC25A31Q9H0C2 315 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 GSN-AS1Q9NRJ2 163 aa11.22□□□□□ -0.61
CXCL12-206ENST00000395795 NBEAP1P0C6P0 100 aa11.21□□□□□ -0.61
CXCL12-206ENST00000395795 RXFP4Q8TDU9 374 aa11.21□□□□□ -0.61
CXCL12-206ENST00000395795 PHYHIPLQ96FC7 376 aa11.21□□□□□ -0.61
CXCL12-206ENST00000395795 VSIG2Q96IQ7 327 aa11.21□□□□□ -0.61
CXCL12-206ENST00000395795 C18orf15Q96N68 181 aa11.21□□□□□ -0.61
CXCL12-206ENST00000395795 OR51M1Q9H341 326 aa11.21□□□□□ -0.61
CXCL12-206ENST00000395795 TMPRSS5Q9H3S3 457 aa11.21□□□□□ -0.61
CXCL12-206ENST00000395795 TIMM9Q9Y5J7 89 aa11.21□□□□□ -0.61
CXCL12-206ENST00000395795 MPC2O95563 127 aa11.2□□□□□ -0.62
CXCL12-206ENST00000395795 RLN2P04090 185 aa11.2□□□□□ -0.62
CXCL12-206ENST00000395795 OR10J4P0C629 311 aa11.2□□□□□ -0.62
CXCL12-206ENST00000395795 TNP2Q05952 138 aa11.2□□□□□ -0.62
CXCL12-206ENST00000395795 ANXA2RQ3ZCQ2 193 aa11.2□□□□□ -0.62
CXCL12-206ENST00000395795 SSX7Q7RTT5 188 aa11.2□□□□□ -0.62
CXCL12-206ENST00000395795 ZNF575Q86XF7 245 aa11.2□□□□□ -0.62
CXCL12-206ENST00000395795 CCDC28AQ8IWP9 274 aa11.2□□□□□ -0.62
CXCL12-206ENST00000395795 WFDC1Q9HC57 220 aa11.2□□□□□ -0.62
CXCL12-206ENST00000395795 ZNF492Q9P255 531 aa11.2□□□□□ -0.62
CXCL12-206ENST00000395795 TP53TG3Q9ULZ0 132 aa11.2□□□□□ -0.62
CXCL12-206ENST00000395795 FUT9Q9Y231 359 aa11.2□□□□□ -0.62
CXCL12-206ENST00000395795 HSPB11Q9Y547 144 aa11.2□□□□□ -0.62
CXCL12-206ENST00000395795 A0A0J9YY99 117 aa11.19□□□□□ -0.62
CXCL12-206ENST00000395795 NMBP08949 121 aa11.19□□□□□ -0.62
CXCL12-206ENST00000395795 MED14OSP0DP75 135 aa11.19□□□□□ -0.62
CXCL12-206ENST00000395795 M6PRP20645 277 aa11.19□□□□□ -0.62
CXCL12-206ENST00000395795 OR5I1Q13606 314 aa11.19□□□□□ -0.62
CXCL12-206ENST00000395795 ESRGQ1W209 222 aa11.19□□□□□ -0.62
CXCL12-206ENST00000395795 FAM122CQ6P4D5 195 aa11.19□□□□□ -0.62
CXCL12-206ENST00000395795 ATP5SQ99766 215 aa11.19□□□□□ -0.62
CXCL12-206ENST00000395795 ATG101Q9BSB4 218 aa11.19□□□□□ -0.62
CXCL12-206ENST00000395795 PAXXQ9BUH6 204 aa11.19□□□□□ -0.62
CXCL12-206ENST00000395795 MRPL32Q9BYC8 188 aaKnown RBP11.19□□□□□ -0.62
CXCL12-206ENST00000395795 KLF12Q9Y4X4 402 aa11.19□□□□□ -0.62
CXCL12-206ENST00000395795 MUC4Q99102 2169 aa11.18□□□□□ -0.62
CXCL12-206ENST00000395795 PCLOQ9Y6V0 5065 aa11.18□□□□□ -0.62
CXCL12-206ENST00000395795 RYR1P21817 5038 aa11.18□□□□□ -0.62
CXCL12-206ENST00000395795 LRP1BQ9NZR2 4599 aa11.18□□□□□ -0.62
CXCL12-206ENST00000395795 SNURFLB1AK76 121 aa11.18□□□□□ -0.62
CXCL12-206ENST00000395795 H3BNG1 76 aa11.18□□□□□ -0.62
CXCL12-206ENST00000395795 SPINK4O60575 86 aa11.18□□□□□ -0.62
CXCL12-206ENST00000395795 EIF3GO75821 320 aaKnown RBP eCLIP11.18□□□□□ -0.62
CXCL12-206ENST00000395795 RNASE4P34096 147 aaKnown RBP11.18□□□□□ -0.62
CXCL12-206ENST00000395795 CCL18P55774 89 aa11.18□□□□□ -0.62
CXCL12-206ENST00000395795 ASB13Q8WXK3 278 aa11.18□□□□□ -0.62
CXCL12-206ENST00000395795 GNPNAT1Q96EK6 184 aaPredicted RBP11.18□□□□□ -0.62
CXCL12-206ENST00000395795 HSPG2P98160 4391 aa11.17□□□□□ -0.62
CXCL12-206ENST00000395795 TCL1AP56279 114 aa11.17□□□□□ -0.62
CXCL12-206ENST00000395795 EIF4E3Q8N5X7 224 aaKnown RBP11.17□□□□□ -0.62
CXCL12-206ENST00000395795 Q8TAT8 98 aa11.17□□□□□ -0.62
CXCL12-206ENST00000395795 UPK3BQ9BT76 320 aa11.17□□□□□ -0.62
CXCL12-206ENST00000395795 AAMDCQ9H7C9 122 aa11.17□□□□□ -0.62
CXCL12-206ENST00000395795 MBD2Q9UBB5 411 aa11.17□□□□□ -0.62
CXCL12-206ENST00000395795 C6orf223Q8N319 242 aa11.16□□□□□ -0.62
CXCL12-206ENST00000395795 ZNF680Q8NEM1 530 aa11.16□□□□□ -0.62
CXCL12-206ENST00000395795 A0A096LPF7 62 aa11.15□□□□□ -0.62
CXCL12-206ENST00000395795 TRBV7-9A0A0J9YWB2 115 aa11.15□□□□□ -0.62
CXCL12-206ENST00000395795 GPX1P07203 203 aa11.15□□□□□ -0.62
CXCL12-206ENST00000395795 GIPP09681 153 aaPredicted RBP11.15□□□□□ -0.62
CXCL12-206ENST00000395795 RPL12P30050 165 aaKnown RBP11.15□□□□□ -0.62
CXCL12-206ENST00000395795 ZNF138P52744 262 aa11.15□□□□□ -0.62
CXCL12-206ENST00000395795 SOHLH1Q5JUK2 328 aa11.15□□□□□ -0.62
CXCL12-206ENST00000395795 FFAR4Q5NUL3 377 aa11.15□□□□□ -0.62
CXCL12-206ENST00000395795 IBA57Q5T440 356 aaKnown RBP11.15□□□□□ -0.62
CXCL12-206ENST00000395795 SMIM3Q9BZL3 60 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 1463.6 ms