RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ZNF492Q9P255 531 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 PFN2P35080 140 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 TMEM141Q96I45 108 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 TMEM126AQ9H061 195 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 NCOR1P1Q9H4R4 102 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 TSSC4Q9Y5U2 329 aaPredicted RBP8.29□□□□□ -1.08
COL4A6-203ENST00000394872 PI4KAP42356 2102 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 LINC00311Q8N616 119 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 SNHG12Q9BXW3 62 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 AKAP6Q13023 2319 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 PTPRDP23468 1912 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 HOXB4P17483 251 aaPredicted RBP8.29□□□□□ -1.08
COL4A6-203ENST00000394872 CHAC1Q9BUX1 264 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 ELANEP08246 267 aa8.28□□□□□ -1.08
COL4A6-203ENST00000394872 OCIAD2Q56VL3 154 aa8.28□□□□□ -1.08
COL4A6-203ENST00000394872 GAGE2AQ6NT46 116 aa8.28□□□□□ -1.08
COL4A6-203ENST00000394872 DEFB112Q30KQ8 113 aa8.28□□□□□ -1.08
COL4A6-203ENST00000394872 IGHV7-4-1A0A0J9YVY3 117 aa8.28□□□□□ -1.08
COL4A6-203ENST00000394872 H3BRN7 92 aa8.28□□□□□ -1.08
COL4A6-203ENST00000394872 ETV2O00321 342 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-203ENST00000394872 EDA2RQ9HAV5 297 aa8.28□□□□□ -1.08
COL4A6-203ENST00000394872 PRB1P04280 392 aa8.28□□□□□ -1.08
COL4A6-203ENST00000394872 KIR3DS1Q14943 382 aa8.27□□□□□ -1.08
COL4A6-203ENST00000394872 IGHV2-5P01817 119 aa8.27□□□□□ -1.09
COL4A6-203ENST00000394872 UBE2V1Q13404 147 aa8.27□□□□□ -1.09
COL4A6-203ENST00000394872 DIAPH2-AS1Q14236 149 aa8.27□□□□□ -1.09
COL4A6-203ENST00000394872 DEFB113Q30KQ7 82 aa8.27□□□□□ -1.09
COL4A6-203ENST00000394872 KIAA2026Q5HYC2 2103 aa8.27□□□□□ -1.09
COL4A6-203ENST00000394872 VPREB3Q9UKI3 123 aa8.27□□□□□ -1.09
COL4A6-203ENST00000394872 TRAV26-2A0A0B4J265 109 aa8.27□□□□□ -1.09
COL4A6-203ENST00000394872 WISP1O95388 367 aa8.27□□□□□ -1.09
COL4A6-203ENST00000394872 IGHV4-59P01825 116 aa8.27□□□□□ -1.09
COL4A6-203ENST00000394872 Q8N8P6 123 aa8.27□□□□□ -1.09
COL4A6-203ENST00000394872 HOXD3P31249 432 aaPredicted RBP8.27□□□□□ -1.09
COL4A6-203ENST00000394872 RSPO3Q9BXY4 272 aaPredicted RBP8.27□□□□□ -1.09
COL4A6-203ENST00000394872 COL6A6A6NMZ7 2263 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 GRNP28799 593 aaKnown RBP8.26□□□□□ -1.09
COL4A6-203ENST00000394872 C2orf66Q6UXQ4 117 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 MMP23AO75900 390 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 MPV17L2Q567V2 206 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 NEGR1Q7Z3B1 354 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 FRMPD3Q5JV73 1810 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 SHISA9B4DS77 424 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 C15orf65H3BRN8 121 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 LHBP01229 141 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 HLA-DRB4P13762 266 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 HLA-DRB4X5D2U9 266 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 CCL24O00175 119 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 NDUFS7O75251 213 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 ANGP03950 147 aaKnown RBP8.26□□□□□ -1.09
COL4A6-203ENST00000394872 CLPSL2Q6UWE3 100 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 STPG4Q8N801 248 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 COX11Q9Y6N1 276 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 SPINK8P0C7L1 97 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 ZNF134P52741 427 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 FAM104BQ5XKR9 115 aa8.26□□□□□ -1.09
COL4A6-203ENST00000394872 SDHAF1A6NFY7 115 aa8.25□□□□□ -1.09
COL4A6-203ENST00000394872 CACNA1BQ00975 2339 aa8.25□□□□□ -1.09
COL4A6-203ENST00000394872 C9JAW5 83 aa8.25□□□□□ -1.09
COL4A6-203ENST00000394872 NXPH4O95158 308 aa8.25□□□□□ -1.09
COL4A6-203ENST00000394872 RBMY1FQ15415 496 aaKnown RBP8.25□□□□□ -1.09
COL4A6-203ENST00000394872 SUMO4Q6EEV6 95 aa8.25□□□□□ -1.09
COL4A6-203ENST00000394872 RLFQ13129 1914 aa8.25□□□□□ -1.09
COL4A6-203ENST00000394872 CNOT1A5YKK6 2376 aaKnown RBP8.25□□□□□ -1.09
COL4A6-203ENST00000394872 IGKV1-39P01597 117 aa8.25□□□□□ -1.09
COL4A6-203ENST00000394872 IGKV1D-39P04432 117 aa8.25□□□□□ -1.09
COL4A6-203ENST00000394872 WT1-ASQ06250 92 aa8.25□□□□□ -1.09
COL4A6-203ENST00000394872 PRR25Q96S07 402 aa8.25□□□□□ -1.09
COL4A6-203ENST00000394872 EP300Q09472 2414 aaPredicted RBP8.25□□□□□ -1.09
COL4A6-203ENST00000394872 H3BUA1 57 aa8.24□□□□□ -1.09
COL4A6-203ENST00000394872 KLF5Q13887 457 aaPredicted RBP8.24□□□□□ -1.09
COL4A6-203ENST00000394872 TMEM14CQ9P0S9 112 aa8.24□□□□□ -1.09
COL4A6-203ENST00000394872 CEP250Q9BV73 2442 aa8.24□□□□□ -1.09
COL4A6-203ENST00000394872 A0A0J9YY99 117 aa8.24□□□□□ -1.09
COL4A6-203ENST00000394872 FAM231BA6NCW3 169 aa8.24□□□□□ -1.09
COL4A6-203ENST00000394872 K7EM74 188 aa8.24□□□□□ -1.09
COL4A6-203ENST00000394872 MRPL51Q4U2R6 128 aaKnown RBP8.24□□□□□ -1.09
COL4A6-203ENST00000394872 POLEQ07864 2286 aa8.24□□□□□ -1.09
COL4A6-203ENST00000394872 PRSS29PA6NIE9 313 aa8.24□□□□□ -1.09
COL4A6-203ENST00000394872 CT83Q5H943 113 aa8.24□□□□□ -1.09
COL4A6-203ENST00000394872 CYYR1Q96J86 154 aa8.24□□□□□ -1.09
COL4A6-203ENST00000394872 NOP10Q9NPE3 64 aaKnown RBP8.24□□□□□ -1.09
COL4A6-203ENST00000394872 DOCK8Q8NF50 2099 aa8.24□□□□□ -1.09
COL4A6-203ENST00000394872 IGHV2-70P01814 119 aa8.24□□□□□ -1.09
COL4A6-203ENST00000394872 TCF15Q12870 199 aa8.24□□□□□ -1.09
COL4A6-203ENST00000394872 C22orf46C9J442 243 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 DEFB136Q30KP8 78 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 HELZP42694 1942 aaKnown RBP8.23□□□□□ -1.09
COL4A6-203ENST00000394872 CFPP27918 469 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 C9orf66Q5T8R8 295 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 KAAG1Q9UBP8 84 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 TANC1Q9C0D5 1861 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 PLXNA4Q9HCM2 1894 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 IGKV2D-24A0A075B6R9 120 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 SLX1AQ9BQ83 275 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 IGKV1OR2-108A0A075B7D4 117 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 TRAV25A0A0B4J276 109 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 MRPL52Q86TS9 123 aaKnown RBP8.23□□□□□ -1.09
COL4A6-203ENST00000394872 IGHV1-24A0A0C4DH33 117 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 SLAQ13239 276 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms