RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 PAM16Q9Y3D7 125 aa14.31□□□□□ -0.12
SIL1-202ENST00000394817 IGHV3-66A0A0C4DH42 116 aa14.31□□□□□ -0.12
SIL1-202ENST00000394817 ZNF493Q6ZR52 646 aa14.31□□□□□ -0.12
SIL1-202ENST00000394817 HIF1ANQ9NWT6 349 aa14.31□□□□□ -0.12
SIL1-202ENST00000394817 GATA3P23771 443 aa14.3□□□□□ -0.12
SIL1-202ENST00000394817 PPIFP30405 207 aaKnown RBP14.3□□□□□ -0.12
SIL1-202ENST00000394817 ZNF80P51504 273 aaPredicted RBP14.3□□□□□ -0.12
SIL1-202ENST00000394817 RPS20P60866 119 aaKnown RBP14.3□□□□□ -0.12
SIL1-202ENST00000394817 SRSF2Q01130 221 aaKnown RBP14.3□□□□□ -0.12
SIL1-202ENST00000394817 RNF182Q8N6D2 247 aa14.3□□□□□ -0.12
SIL1-202ENST00000394817 MRPL53Q96EL3 112 aaKnown RBP14.3□□□□□ -0.12
SIL1-202ENST00000394817 TPPP3Q9BW30 176 aa14.3□□□□□ -0.12
SIL1-202ENST00000394817 PRAC2D3DTV9 90 aa14.29□□□□□ -0.12
SIL1-202ENST00000394817 M0QZ24 198 aa14.29□□□□□ -0.12
SIL1-202ENST00000394817 LYZL1Q6UWQ5 148 aa14.29□□□□□ -0.12
SIL1-202ENST00000394817 IGHV3OR16-13A0A075B7E8 117 aa14.29□□□□□ -0.12
SIL1-202ENST00000394817 TMSB15BA0A087X1C1 80 aa14.29□□□□□ -0.12
SIL1-202ENST00000394817 IGHV3-74A0A0B4J1X5 117 aa14.29□□□□□ -0.12
SIL1-202ENST00000394817 ZNF207O43670 478 aaKnown RBP14.29□□□□□ -0.12
SIL1-202ENST00000394817 ARL3P36405 182 aa14.29□□□□□ -0.12
SIL1-202ENST00000394817 CTRLP40313 264 aa14.29□□□□□ -0.12
SIL1-202ENST00000394817 A0A096LNT2 108 aa14.28□□□□□ -0.12
SIL1-202ENST00000394817 C2orf70A6NJV1 201 aa14.28□□□□□ -0.12
SIL1-202ENST00000394817 SLC25A16P16260 332 aa14.28□□□□□ -0.12
SIL1-202ENST00000394817 RAB4AP20338 218 aa14.28□□□□□ -0.12
SIL1-202ENST00000394817 CYB5R2Q6BCY4 276 aa14.28□□□□□ -0.12
SIL1-202ENST00000394817 HIST2H2BCQ6DN03 193 aa14.28□□□□□ -0.12
SIL1-202ENST00000394817 EBLN2Q6P2I7 272 aa14.28□□□□□ -0.12
SIL1-202ENST00000394817 C8orf86Q6ZUL3 223 aa14.28□□□□□ -0.12
SIL1-202ENST00000394817 C2orf88Q9BSF0 95 aa14.28□□□□□ -0.12
SIL1-202ENST00000394817 APCP25054 2843 aa14.28□□□□□ -0.12
SIL1-202ENST00000394817 IGHV3-49A0A0A0MS15 119 aa14.27□□□□□ -0.12
SIL1-202ENST00000394817 TRAV8-2A0A0B4J237 113 aa14.27□□□□□ -0.12
SIL1-202ENST00000394817 IGHV1-24A0A0C4DH33 117 aa14.27□□□□□ -0.12
SIL1-202ENST00000394817 AVPP01185 164 aa14.27□□□□□ -0.12
SIL1-202ENST00000394817 LINC00614P0C842 121 aa14.27□□□□□ -0.12
SIL1-202ENST00000394817 ERCC8Q13216 396 aa14.27□□□□□ -0.12
SIL1-202ENST00000394817 MAPK1IP1LQ8NDC0 245 aa14.27□□□□□ -0.12
SIL1-202ENST00000394817 USMG5Q96IX5 58 aa14.27□□□□□ -0.12
SIL1-202ENST00000394817 MIEN1Q9BRT3 115 aa14.27□□□□□ -0.12
SIL1-202ENST00000394817 IGLC6P0CF74 106 aa14.27□□□□□ -0.13
SIL1-202ENST00000394817 BTF3P20290 206 aaKnown RBP14.27□□□□□ -0.13
SIL1-202ENST00000394817 GLMPQ8WWB7 406 aa14.27□□□□□ -0.13
SIL1-202ENST00000394817 NAV2Q8IVL1 2488 aa14.27□□□□□ -0.13
SIL1-202ENST00000394817 NDUFA4O00483 81 aa14.26□□□□□ -0.13
SIL1-202ENST00000394817 PSMG3-AS1Q96PY0 264 aa14.26□□□□□ -0.13
SIL1-202ENST00000394817 FABP5P3A8MUU1 101 aa14.25□□□□□ -0.13
SIL1-202ENST00000394817 J3QKU1 62 aa14.25□□□□□ -0.13
SIL1-202ENST00000394817 PMCHL1Q16048 86 aa14.25□□□□□ -0.13
SIL1-202ENST00000394817 ZNF575Q86XF7 245 aa14.25□□□□□ -0.13
SIL1-202ENST00000394817 FER1L6-AS1Q8NA97 138 aa14.25□□□□□ -0.13
SIL1-202ENST00000394817 HELZ2Q9BYK8 2649 aaKnown RBP14.25□□□□□ -0.13
SIL1-202ENST00000394817 ZANQ9Y493 2812 aa14.25□□□□□ -0.13
SIL1-202ENST00000394817 TMEM213A2RRL7 107 aa14.25□□□□□ -0.13
SIL1-202ENST00000394817 TRBV12-3P01733 135 aa14.25□□□□□ -0.13
SIL1-202ENST00000394817 BLCAPP62952 87 aa14.25□□□□□ -0.13
SIL1-202ENST00000394817 CLEC5AQ9NY25 188 aa14.25□□□□□ -0.13
SIL1-202ENST00000394817 EREGO14944 169 aa14.24□□□□□ -0.13
SIL1-202ENST00000394817 DEFB113Q30KQ7 82 aa14.24□□□□□ -0.13
SIL1-202ENST00000394817 LINC01559Q495D7 138 aa14.24□□□□□ -0.13
SIL1-202ENST00000394817 SPATA45Q537H7 98 aa14.24□□□□□ -0.13
SIL1-202ENST00000394817 IL17RELQ6ZVW7 336 aa14.24□□□□□ -0.13
SIL1-202ENST00000394817 IGLV1-40P01703 118 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 FAM104BQ5XKR9 115 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 UNQ9165/PRO28630Q6UXU0 137 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 MRPL52Q86TS9 123 aaKnown RBP14.23□□□□□ -0.13
SIL1-202ENST00000394817 LINC01356Q8N9X3 169 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 AGPAT4-IT1Q9H0P7 198 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 ZNF580Q9UK33 172 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 U3KQK5 164 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 CR1P17927 2039 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 RNF223E7ERA6 249 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 CRXO43186 299 aaPredicted RBP14.23□□□□□ -0.13
SIL1-202ENST00000394817 OR5AL1P0C617 328 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 C9orf47Q6ZRZ4 202 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 Q6ZS46 218 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 C9orf139Q6ZV77 190 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 TMEM70Q9BUB7 260 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 SNHG12Q9BXW3 62 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 CNFNQ9BYD5 112 aa14.23□□□□□ -0.13
SIL1-202ENST00000394817 BEX4Q9NWD9 120 aaPredicted RBP14.23□□□□□ -0.13
SIL1-202ENST00000394817 LEPROTL1O95214 131 aa14.22□□□□□ -0.13
SIL1-202ENST00000394817 ORM1P02763 201 aa14.22□□□□□ -0.13
SIL1-202ENST00000394817 ZNF138P52744 262 aa14.22□□□□□ -0.13
SIL1-202ENST00000394817 CFHR3Q02985 330 aa14.22□□□□□ -0.13
SIL1-202ENST00000394817 TMEM78Q5T7P6 136 aa14.22□□□□□ -0.13
SIL1-202ENST00000394817 ZNF705AQ6ZN79 300 aaPredicted RBP14.22□□□□□ -0.13
SIL1-202ENST00000394817 KLK15Q9H2R5 256 aa14.22□□□□□ -0.13
SIL1-202ENST00000394817 PPP1R14DQ9NXH3 145 aa14.22□□□□□ -0.13
SIL1-202ENST00000394817 PF4V1P10720 104 aa14.21□□□□□ -0.13
SIL1-202ENST00000394817 Q5PR19 223 aa14.21□□□□□ -0.13
SIL1-202ENST00000394817 M0R143 59 aa14.21□□□□□ -0.14
SIL1-202ENST00000394817 SMAD7O15105 426 aaKnown RBP14.21□□□□□ -0.14
SIL1-202ENST00000394817 HIST1H1AQ02539 215 aaPredicted RBP14.21□□□□□ -0.14
SIL1-202ENST00000394817 AMN1Q8IY45 258 aa14.21□□□□□ -0.14
SIL1-202ENST00000394817 C16orf92Q96LL3 132 aa14.21□□□□□ -0.14
SIL1-202ENST00000394817 A0A1B0GV90 55 aa14.2□□□□□ -0.14
SIL1-202ENST00000394817 D6R8Y8 96 aa14.2□□□□□ -0.14
SIL1-202ENST00000394817 CSN3P07498 182 aa14.2□□□□□ -0.14
SIL1-202ENST00000394817 AP5S1Q9NUS5 200 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms