RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 MRPL35Q9NZE8 188 aaKnown RBP15.81■□□□□ 0.12
SHANK1-203ENST00000391813 PRO1854Q9UHT4 67 aa15.81■□□□□ 0.12
SHANK1-203ENST00000391813 PRB4P10163 310 aaPredicted RBP15.8■□□□□ 0.12
SHANK1-203ENST00000391813 C12orf74Q32Q52 190 aa15.8■□□□□ 0.12
SHANK1-203ENST00000391813 SRRM4A7MD48 611 aaKnown RBP15.8■□□□□ 0.12
SHANK1-203ENST00000391813 WISP1O95388 367 aa15.8■□□□□ 0.12
SHANK1-203ENST00000391813 KIAA1671Q9BY89 1806 aa15.8■□□□□ 0.12
SHANK1-203ENST00000391813 HIST1H4AP62805 103 aaKnown RBP15.8■□□□□ 0.12
SHANK1-203ENST00000391813 MINOS1Q5TGZ0 78 aa15.8■□□□□ 0.12
SHANK1-203ENST00000391813 ZNF474Q6S9Z5 364 aaPredicted RBP15.8■□□□□ 0.12
SHANK1-203ENST00000391813 MINOS1-NBL1R4GNA1 71 aa15.8■□□□□ 0.12
SHANK1-203ENST00000391813 HLA-DRB4P13762 266 aa15.79■□□□□ 0.12
SHANK1-203ENST00000391813 FXYD5Q96DB9 178 aa15.79■□□□□ 0.12
SHANK1-203ENST00000391813 HLA-DRB4X5D2U9 266 aa15.79■□□□□ 0.12
SHANK1-203ENST00000391813 TEX48A0A1B0GUV7 120 aa15.79■□□□□ 0.12
SHANK1-203ENST00000391813 PRB3Q04118 309 aaPredicted RBP15.79■□□□□ 0.12
SHANK1-203ENST00000391813 B4DSR2 109 aa15.79■□□□□ 0.12
SHANK1-203ENST00000391813 NDUFS7O75251 213 aa15.79■□□□□ 0.12
SHANK1-203ENST00000391813 BUB1B-PAK6H3BSN5 160 aa15.79■□□□□ 0.12
SHANK1-203ENST00000391813 NDUFB8O95169 186 aa15.79■□□□□ 0.12
SHANK1-203ENST00000391813 PMVKQ15126 192 aa15.79■□□□□ 0.12
SHANK1-203ENST00000391813 PRADC1Q9BSG0 188 aa15.79■□□□□ 0.12
SHANK1-203ENST00000391813 TRBV7-1A0A0A6YYK4 115 aa15.78■□□□□ 0.12
SHANK1-203ENST00000391813 SP5Q6BEB4 398 aaPredicted RBP15.78■□□□□ 0.12
SHANK1-203ENST00000391813 DNAJC30Q96LL9 226 aa15.78■□□□□ 0.12
SHANK1-203ENST00000391813 PRR25Q96S07 402 aa15.78■□□□□ 0.12
SHANK1-203ENST00000391813 ITLN2Q8WWU7 325 aaPredicted RBP15.78■□□□□ 0.12
SHANK1-203ENST00000391813 NPYP01303 97 aa15.77■□□□□ 0.12
SHANK1-203ENST00000391813 LINC01545Q5VT33 79 aa15.77■□□□□ 0.12
SHANK1-203ENST00000391813 AMTNQ6UX39 209 aa15.77■□□□□ 0.12
SHANK1-203ENST00000391813 THAP8Q8NA92 274 aa15.77■□□□□ 0.12
SHANK1-203ENST00000391813 LTAP01374 205 aa15.77■□□□□ 0.11
SHANK1-203ENST00000391813 HLA-DMBP28068 263 aa15.77■□□□□ 0.11
SHANK1-203ENST00000391813 LINC00158P58513 81 aa15.77■□□□□ 0.11
SHANK1-203ENST00000391813 C3orf36Q3SXR2 165 aa15.77■□□□□ 0.11
SHANK1-203ENST00000391813 PRSS22Q9GZN4 317 aa15.77■□□□□ 0.11
SHANK1-203ENST00000391813 SHISA9B4DS77 424 aa15.76■□□□□ 0.11
SHANK1-203ENST00000391813 PKDREJQ9NTG1 2253 aa15.76■□□□□ 0.11
SHANK1-203ENST00000391813 IGLC1P0CG04 106 aa15.76■□□□□ 0.11
SHANK1-203ENST00000391813 PRR30Q53SZ7 412 aaPredicted RBP15.76■□□□□ 0.11
SHANK1-203ENST00000391813 K7EM74 188 aa15.76■□□□□ 0.11
SHANK1-203ENST00000391813 K7ERJ3 54 aa15.76■□□□□ 0.11
SHANK1-203ENST00000391813 CITED1Q99966 193 aa15.76■□□□□ 0.11
SHANK1-203ENST00000391813 TRGV2A0A075B6R0 118 aa15.76■□□□□ 0.11
SHANK1-203ENST00000391813 TRAV41A0A0B4J266 112 aa15.76■□□□□ 0.11
SHANK1-203ENST00000391813 FGF6P10767 208 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 NPC2P61916 151 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 Q6ZSR3 168 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 LTBP2Q14767 1821 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 C15orf65H3BRN8 121 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 ADARB2-AS1A8MUL3 147 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 LYNX1G3V0Z9 82 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 TAX1BP3O14907 124 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 LEPROTO15243 131 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 SAP30O75446 220 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 LYNX1P0DP58 116 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 UTF1Q5T230 341 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 TP53TG1Q9Y2A0 90 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 ZNF833PQ6ZTB9 187 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 PEMTQ9UBM1 199 aa15.75■□□□□ 0.11
SHANK1-203ENST00000391813 PCNX1Q96RV3 2341 aa15.74■□□□□ 0.11
SHANK1-203ENST00000391813 GAGE2AQ6NT46 116 aa15.74■□□□□ 0.11
SHANK1-203ENST00000391813 GATD1Q8NB37 220 aa15.74■□□□□ 0.11
SHANK1-203ENST00000391813 C8orf49Q96NF6 230 aa15.74■□□□□ 0.11
SHANK1-203ENST00000391813 SCRT2Q9NQ03 307 aa15.74■□□□□ 0.11
SHANK1-203ENST00000391813 CUL9Q8IWT3 2517 aa15.74■□□□□ 0.11
SHANK1-203ENST00000391813 SMIM2Q9BVW6 85 aa15.74■□□□□ 0.11
SHANK1-203ENST00000391813 DKK2Q9UBU2 259 aa15.74■□□□□ 0.11
SHANK1-203ENST00000391813 ZC2HC1AQ96GY0 325 aa15.74■□□□□ 0.11
SHANK1-203ENST00000391813 CHD3Q12873 2000 aaKnown RBP15.73■□□□□ 0.11
SHANK1-203ENST00000391813 SPXQ9BT56 116 aa15.73■□□□□ 0.11
SHANK1-203ENST00000391813 A0A087WX48 190 aa15.73■□□□□ 0.11
SHANK1-203ENST00000391813 WT1-ASQ06250 92 aa15.73■□□□□ 0.11
SHANK1-203ENST00000391813 IGFL4Q6B9Z1 124 aa15.73■□□□□ 0.11
SHANK1-203ENST00000391813 WDR86Q86TI4 376 aa15.73■□□□□ 0.11
SHANK1-203ENST00000391813 DOCK7Q96N67 2140 aa15.73■□□□□ 0.11
SHANK1-203ENST00000391813 ZNF407Q9C0G0 2248 aa15.73■□□□□ 0.11
SHANK1-203ENST00000391813 DOCK10Q96BY6 2186 aa15.72■□□□□ 0.11
SHANK1-203ENST00000391813 FAM208BQ5VWN6 2430 aa15.72■□□□□ 0.11
SHANK1-203ENST00000391813 GATA4P43694 442 aa15.72■□□□□ 0.11
SHANK1-203ENST00000391813 TRPT1Q86TN4 253 aaKnown RBP15.72■□□□□ 0.11
SHANK1-203ENST00000391813 M0R1W7 72 aa15.72■□□□□ 0.11
SHANK1-203ENST00000391813 PAX4O43316 350 aa15.72■□□□□ 0.11
SHANK1-203ENST00000391813 VMO1Q7Z5L0 202 aa15.72■□□□□ 0.11
SHANK1-203ENST00000391813 PCP2Q8IVA1 136 aa15.71■□□□□ 0.11
SHANK1-203ENST00000391813 ACACBO00763 2458 aa15.71■□□□□ 0.11
SHANK1-203ENST00000391813 SRD5A1P18405 259 aa15.71■□□□□ 0.11
SHANK1-203ENST00000391813 ERCC8Q13216 396 aa15.71■□□□□ 0.11
SHANK1-203ENST00000391813 FOXI2Q6ZQN5 318 aa15.71■□□□□ 0.11
SHANK1-203ENST00000391813 H3BRN7 92 aa15.71■□□□□ 0.11
SHANK1-203ENST00000391813 FCN3O75636 299 aa15.71■□□□□ 0.11
SHANK1-203ENST00000391813 PRIMA1Q86XR5 153 aa15.71■□□□□ 0.1
SHANK1-203ENST00000391813 LINC00311Q8N616 119 aa15.71■□□□□ 0.1
SHANK1-203ENST00000391813 TRBV25-1A0A075B6N4 114 aa15.7■□□□□ 0.1
SHANK1-203ENST00000391813 B5MCH6 92 aa15.7■□□□□ 0.1
SHANK1-203ENST00000391813 K7EMI3 77 aa15.7■□□□□ 0.1
SHANK1-203ENST00000391813 DTX2Q86UW9 622 aa15.7■□□□□ 0.1
SHANK1-203ENST00000391813 C20orf78Q9BR46 151 aa15.7■□□□□ 0.1
SHANK1-203ENST00000391813 IGLL5B9A064 214 aa15.7■□□□□ 0.1
SHANK1-203ENST00000391813 RPL36AP83881 106 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms