RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
PDGFB-202ENST00000381551 PPP1R14DQ9NXH3 145 aa11.29□□□□□ -0.6
PDGFB-202ENST00000381551 ZNF492Q9P255 531 aa11.29□□□□□ -0.6
PDGFB-202ENST00000381551 GNG13Q9P2W3 67 aa11.29□□□□□ -0.6
PDGFB-202ENST00000381551 XCL2Q9UBD3 114 aa11.29□□□□□ -0.6
PDGFB-202ENST00000381551 RPH3ALQ9UNE2 315 aa11.29□□□□□ -0.6
PDGFB-202ENST00000381551 SERTM2A0A1B0GWG4 89 aa11.28□□□□□ -0.6
PDGFB-202ENST00000381551 ATP5G3P48201 142 aa11.28□□□□□ -0.6
PDGFB-202ENST00000381551 SPINK13Q1W4C9 94 aa11.28□□□□□ -0.6
PDGFB-202ENST00000381551 TMEM78Q5T7P6 136 aa11.28□□□□□ -0.6
PDGFB-202ENST00000381551 HIST1H2BAQ96A08 127 aa11.28□□□□□ -0.6
PDGFB-202ENST00000381551 RNF183Q96D59 192 aa11.28□□□□□ -0.6
PDGFB-202ENST00000381551 FAM19A4Q96LR4 140 aa11.28□□□□□ -0.6
PDGFB-202ENST00000381551 SPATA25Q9BR10 227 aa11.28□□□□□ -0.6
PDGFB-202ENST00000381551 MANBALQ9NQG1 85 aa11.28□□□□□ -0.6
PDGFB-202ENST00000381551 TGP01266 2768 aa11.28□□□□□ -0.6
PDGFB-202ENST00000381551 M0R2Z0 102 aa11.27□□□□□ -0.61
PDGFB-202ENST00000381551 CRXO43186 299 aaPredicted RBP11.27□□□□□ -0.61
PDGFB-202ENST00000381551 SPRY2O43597 315 aa11.27□□□□□ -0.61
PDGFB-202ENST00000381551 CDKN1BP46527 198 aa11.27□□□□□ -0.61
PDGFB-202ENST00000381551 ZNF138P52744 262 aa11.27□□□□□ -0.61
PDGFB-202ENST00000381551 DEFB135Q30KP9 77 aa11.27□□□□□ -0.61
PDGFB-202ENST00000381551 CYB561D1Q8N8Q1 229 aa11.27□□□□□ -0.61
PDGFB-202ENST00000381551 RCHY1Q96PM5 261 aa11.27□□□□□ -0.61
PDGFB-202ENST00000381551 OVOL2Q9BRP0 275 aa11.27□□□□□ -0.61
PDGFB-202ENST00000381551 TCEAL7Q9BRU2 100 aa11.27□□□□□ -0.61
PDGFB-202ENST00000381551 ATG101Q9BSB4 218 aa11.27□□□□□ -0.61
PDGFB-202ENST00000381551 TP53TG1Q9Y2A0 90 aa11.27□□□□□ -0.61
PDGFB-202ENST00000381551 TRAV8-1A0A0A6YYK1 113 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 C11orf94C9JXX5 98 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 K7EQM0 130 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 PEX7O00628 323 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 IGLV2-11P01706 119 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 AMBPP02760 352 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 TSPOP30536 169 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 PCNPQ8WW12 178 aaKnown RBP11.26□□□□□ -0.61
PDGFB-202ENST00000381551 SGK494Q96LW2 274 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 IGF2BP2-AS1Q96M15 143 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 LINC00479Q96M42 142 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 TXNDC17Q9BRA2 123 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 ZMAT4Q9H898 229 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 RETNQ9HD89 108 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 COL7A1Q02388 2944 aa11.26□□□□□ -0.61
PDGFB-202ENST00000381551 TRAV12-2A0A075B6T6 113 aa11.25□□□□□ -0.61
PDGFB-202ENST00000381551 TRBV7-9A0A0J9YWB2 115 aa11.25□□□□□ -0.61
PDGFB-202ENST00000381551 F6UZH7 168 aa11.25□□□□□ -0.61
PDGFB-202ENST00000381551 IFNA1P01562 189 aa11.25□□□□□ -0.61
PDGFB-202ENST00000381551 NMBP08949 121 aa11.25□□□□□ -0.61
PDGFB-202ENST00000381551 CRISP2P16562 243 aa11.25□□□□□ -0.61
PDGFB-202ENST00000381551 LEPP41159 167 aa11.25□□□□□ -0.61
PDGFB-202ENST00000381551 IFITM2Q01629 132 aa11.25□□□□□ -0.61
PDGFB-202ENST00000381551 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
PDGFB-202ENST00000381551 Q8TAT8 98 aa11.25□□□□□ -0.61
PDGFB-202ENST00000381551 FBLL1A6NHQ2 334 aaKnown RBP11.24□□□□□ -0.61
PDGFB-202ENST00000381551 KLLNB2CW77 178 aa11.24□□□□□ -0.61
PDGFB-202ENST00000381551 BCL2P10415 239 aa11.24□□□□□ -0.61
PDGFB-202ENST00000381551 C1orf158Q8N1D5 194 aa11.24□□□□□ -0.61
PDGFB-202ENST00000381551 TMEM75Q8N9X5 138 aa11.24□□□□□ -0.61
PDGFB-202ENST00000381551 RARRES2Q99969 163 aa11.24□□□□□ -0.61
PDGFB-202ENST00000381551 VAX2Q9UIW0 290 aa11.24□□□□□ -0.61
PDGFB-202ENST00000381551 PSG8Q9UQ74 426 aa11.24□□□□□ -0.61
PDGFB-202ENST00000381551 KLF12Q9Y4X4 402 aa11.24□□□□□ -0.61
PDGFB-202ENST00000381551 LENEPQ9Y5L5 61 aa11.24□□□□□ -0.61
PDGFB-202ENST00000381551 TRAV34A0A0B4J273 112 aa11.23□□□□□ -0.61
PDGFB-202ENST00000381551 LOC102723971A0A1B0GUV8 181 aa11.23□□□□□ -0.61
PDGFB-202ENST00000381551 TAGLN2P37802 199 aaKnown RBP11.23□□□□□ -0.61
PDGFB-202ENST00000381551 FLI1Q01543 452 aaPredicted RBP11.23□□□□□ -0.61
PDGFB-202ENST00000381551 MEF2BQ02080 365 aaPredicted RBP11.23□□□□□ -0.61
PDGFB-202ENST00000381551 ZNF705AQ6ZN79 300 aaPredicted RBP11.23□□□□□ -0.61
PDGFB-202ENST00000381551 ZNF767PQ75MW2 155 aa11.23□□□□□ -0.61
PDGFB-202ENST00000381551 ZFAND2AQ8N6M9 145 aa11.23□□□□□ -0.61
PDGFB-202ENST00000381551 TVP23CQ96ET8 276 aa11.23□□□□□ -0.61
PDGFB-202ENST00000381551 RBFOX3A6NFN3 312 aa11.22□□□□□ -0.61
PDGFB-202ENST00000381551 J3KRW8 73 aa11.22□□□□□ -0.61
PDGFB-202ENST00000381551 INSP01308 110 aa11.22□□□□□ -0.61
PDGFB-202ENST00000381551 GPX1P07203 203 aa11.22□□□□□ -0.61
PDGFB-202ENST00000381551 RBMY1A1P0DJD3 496 aaKnown RBP11.22□□□□□ -0.61
PDGFB-202ENST00000381551 RBMY1CP0DJD4 496 aa11.22□□□□□ -0.61
PDGFB-202ENST00000381551 RBMY1FQ15415 496 aaKnown RBP11.22□□□□□ -0.61
PDGFB-202ENST00000381551 GFI1BQ5VTD9 330 aa11.22□□□□□ -0.61
PDGFB-202ENST00000381551 PRNTQ86SH4 94 aa11.22□□□□□ -0.61
PDGFB-202ENST00000381551 OR11H2Q8NH07 326 aa11.22□□□□□ -0.61
PDGFB-202ENST00000381551 X6R8D5 127 aa11.22□□□□□ -0.61
PDGFB-202ENST00000381551 TENM3Q9P273 2699 aa11.21□□□□□ -0.61
PDGFB-202ENST00000381551 SCO2A0A1W2PP80 73 aa11.21□□□□□ -0.61
PDGFB-202ENST00000381551 RNASE4P34096 147 aaKnown RBP11.21□□□□□ -0.61
PDGFB-202ENST00000381551 TMEM183BQ1AE95 376 aa11.21□□□□□ -0.61
PDGFB-202ENST00000381551 PRR9Q5T870 116 aa11.21□□□□□ -0.61
PDGFB-202ENST00000381551 C2CD4CQ8TF44 421 aa11.21□□□□□ -0.61
PDGFB-202ENST00000381551 C20orf144Q9BQM9 153 aa11.21□□□□□ -0.61
PDGFB-202ENST00000381551 TREM1Q9NP99 234 aa11.21□□□□□ -0.61
PDGFB-202ENST00000381551 GOLT1BQ9Y3E0 138 aa11.21□□□□□ -0.61
PDGFB-202ENST00000381551 TRAV12-3A0A0B4J271 114 aa11.2□□□□□ -0.62
PDGFB-202ENST00000381551 TRBV6-1A0A0K0K1D8 114 aa11.2□□□□□ -0.62
PDGFB-202ENST00000381551 C7orf71A4D174 169 aa11.2□□□□□ -0.62
PDGFB-202ENST00000381551 PDE6DO43924 150 aa11.2□□□□□ -0.62
PDGFB-202ENST00000381551 ZNF324O75467 553 aaPredicted RBP11.2□□□□□ -0.62
PDGFB-202ENST00000381551 S100A9P06702 114 aaKnown RBP11.2□□□□□ -0.62
PDGFB-202ENST00000381551 RAB14P61106 215 aa11.2□□□□□ -0.62
PDGFB-202ENST00000381551 ZNF506Q5JVG8 444 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 236.4 ms