RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 IGF2BP2-AS1Q96M15 143 aa11.71□□□□□ -0.53
SNRPB-201ENST00000381342 AGPAT4-IT1Q9H0P7 198 aa11.71□□□□□ -0.53
SNRPB-201ENST00000381342 DIRC3C9JPN6 131 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 J3KRW8 73 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 DEFB4AO15263 64 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 SLC25A5P05141 298 aaKnown RBP11.7□□□□□ -0.54
SNRPB-201ENST00000381342 RBMY1A1P0DJD3 496 aaKnown RBP11.7□□□□□ -0.54
SNRPB-201ENST00000381342 RBMY1CP0DJD4 496 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 CDKN1BP46527 198 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 UBE2G2P60604 165 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 KIR3DS1Q14943 382 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 RBMY1FQ15415 496 aaKnown RBP11.7□□□□□ -0.54
SNRPB-201ENST00000381342 TMEM78Q5T7P6 136 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 DPPA3Q6W0C5 159 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 ZNF705AQ6ZN79 300 aaPredicted RBP11.7□□□□□ -0.54
SNRPB-201ENST00000381342 C9orf47Q6ZRZ4 202 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 ZNF767PQ75MW2 155 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 C1orf158Q8N1D5 194 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 Q8NAQ8 132 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 Q8TAT8 98 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 CMTM2Q8TAZ6 248 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 GOLT1BQ9Y3E0 138 aa11.7□□□□□ -0.54
SNRPB-201ENST00000381342 YTHDF2Q9Y5A9 579 aaKnown RBP11.7□□□□□ -0.54
SNRPB-201ENST00000381342 IGHV4-28A0A0C4DH34 117 aa11.69□□□□□ -0.54
SNRPB-201ENST00000381342 LEPP41159 167 aa11.69□□□□□ -0.54
SNRPB-201ENST00000381342 GOLT1AQ6ZVE7 132 aa11.69□□□□□ -0.54
SNRPB-201ENST00000381342 RXFP4Q8TDU9 374 aa11.69□□□□□ -0.54
SNRPB-201ENST00000381342 SFT2D1Q8WV19 159 aa11.69□□□□□ -0.54
SNRPB-201ENST00000381342 ODF3Q96PU9 254 aa11.69□□□□□ -0.54
SNRPB-201ENST00000381342 LCE6AA0A183 80 aa11.68□□□□□ -0.54
SNRPB-201ENST00000381342 CXorf65A6NEN9 183 aa11.68□□□□□ -0.54
SNRPB-201ENST00000381342 MIFP14174 115 aa11.68□□□□□ -0.54
SNRPB-201ENST00000381342 TSPOP30536 169 aa11.68□□□□□ -0.54
SNRPB-201ENST00000381342 SULT1A2P50226 295 aa11.68□□□□□ -0.54
SNRPB-201ENST00000381342 GFI1BQ5VTD9 330 aa11.68□□□□□ -0.54
SNRPB-201ENST00000381342 ALKAL2Q6UX46 152 aa11.68□□□□□ -0.54
SNRPB-201ENST00000381342 C5orf17Q8NAS9 161 aa11.68□□□□□ -0.54
SNRPB-201ENST00000381342 MBD3L1Q8WWY6 194 aa11.68□□□□□ -0.54
SNRPB-201ENST00000381342 LINC00477Q96M19 166 aa11.68□□□□□ -0.54
SNRPB-201ENST00000381342 TMEM208Q9BTX3 173 aa11.68□□□□□ -0.54
SNRPB-201ENST00000381342 C11orf68Q9H3H3 251 aaKnown RBP11.68□□□□□ -0.54
SNRPB-201ENST00000381342 A0A1W2PRE2 83 aa11.67□□□□□ -0.54
SNRPB-201ENST00000381342 RBAKDNA6NC62 111 aa11.67□□□□□ -0.54
SNRPB-201ENST00000381342 H2AFB1P0C5Y9 115 aa11.67□□□□□ -0.54
SNRPB-201ENST00000381342 SUMO1P63165 101 aaKnown RBP11.67□□□□□ -0.54
SNRPB-201ENST00000381342 FAM19A4Q96LR4 140 aa11.67□□□□□ -0.54
SNRPB-201ENST00000381342 FAM74A7A6NL05 159 aa11.66□□□□□ -0.54
SNRPB-201ENST00000381342 RAB5CP51148 216 aa11.66□□□□□ -0.54
SNRPB-201ENST00000381342 ZNF138P52744 262 aa11.66□□□□□ -0.54
SNRPB-201ENST00000381342 PMS2P11Q13670 270 aa11.66□□□□□ -0.54
SNRPB-201ENST00000381342 ZNF492Q9P255 531 aa11.66□□□□□ -0.54
SNRPB-201ENST00000381342 TRAV8-1A0A0A6YYK1 113 aa11.65□□□□□ -0.54
SNRPB-201ENST00000381342 TCRAP04437 139 aa11.65□□□□□ -0.54
SNRPB-201ENST00000381342 BTN1A1Q13410 526 aa11.65□□□□□ -0.54
SNRPB-201ENST00000381342 PRR9Q5T870 116 aa11.65□□□□□ -0.54
SNRPB-201ENST00000381342 ARL6IP6Q8N6S5 226 aa11.65□□□□□ -0.54
SNRPB-201ENST00000381342 NEU1Q99519 415 aa11.65□□□□□ -0.54
SNRPB-201ENST00000381342 TRAV12-3A0A0B4J271 114 aa11.64□□□□□ -0.55
SNRPB-201ENST00000381342 C7orf71A4D174 169 aa11.64□□□□□ -0.55
SNRPB-201ENST00000381342 NUPR2A6NF83 97 aa11.64□□□□□ -0.55
SNRPB-201ENST00000381342 ZNF705GA8MUZ8 300 aaPredicted RBP11.64□□□□□ -0.55
SNRPB-201ENST00000381342 KLLNB2CW77 178 aa11.64□□□□□ -0.55
SNRPB-201ENST00000381342 HBE1P02100 147 aa11.64□□□□□ -0.55
SNRPB-201ENST00000381342 PRM2P04554 102 aa11.64□□□□□ -0.55
SNRPB-201ENST00000381342 CRISP2P16562 243 aa11.64□□□□□ -0.55
SNRPB-201ENST00000381342 ZFAND2AQ8N6M9 145 aa11.64□□□□□ -0.55
SNRPB-201ENST00000381342 SGK494Q96LW2 274 aa11.64□□□□□ -0.55
SNRPB-201ENST00000381342 EPDR1Q9UM22 224 aa11.64□□□□□ -0.55
SNRPB-201ENST00000381342 SMIM9A6NGZ8 99 aa11.63□□□□□ -0.55
SNRPB-201ENST00000381342 PAGE4O60829 102 aa11.63□□□□□ -0.55
SNRPB-201ENST00000381342 RNASE4P34096 147 aaKnown RBP11.63□□□□□ -0.55
SNRPB-201ENST00000381342 ATP5G3P48201 142 aa11.63□□□□□ -0.55
SNRPB-201ENST00000381342 RRN3P1Q2M238 152 aa11.63□□□□□ -0.55
SNRPB-201ENST00000381342 CST9LP1Q5W188 147 aa11.63□□□□□ -0.55
SNRPB-201ENST00000381342 TMEM256Q8N2U0 113 aa11.63□□□□□ -0.55
SNRPB-201ENST00000381342 CYB561D1Q8N8Q1 229 aa11.63□□□□□ -0.55
SNRPB-201ENST00000381342 LINC01587Q99440 93 aa11.63□□□□□ -0.55
SNRPB-201ENST00000381342 ATG101Q9BSB4 218 aa11.63□□□□□ -0.55
SNRPB-201ENST00000381342 KLK5Q9Y337 293 aaPredicted RBP11.63□□□□□ -0.55
SNRPB-201ENST00000381342 KMT2CQ8NEZ4 4911 aaKnown RBP11.63□□□□□ -0.55
SNRPB-201ENST00000381342 LOC102723971A0A1B0GUV8 181 aa11.62□□□□□ -0.55
SNRPB-201ENST00000381342 SERTM2A0A1B0GWG4 89 aa11.62□□□□□ -0.55
SNRPB-201ENST00000381342 PEX7O00628 323 aa11.62□□□□□ -0.55
SNRPB-201ENST00000381342 GPX1P07203 203 aa11.62□□□□□ -0.55
SNRPB-201ENST00000381342 EMP1P54849 157 aa11.62□□□□□ -0.55
SNRPB-201ENST00000381342 CCL20P78556 96 aa11.62□□□□□ -0.55
SNRPB-201ENST00000381342 C20orf144Q9BQM9 153 aa11.62□□□□□ -0.55
SNRPB-201ENST00000381342 CELA1Q9UNI1 258 aa11.62□□□□□ -0.55
SNRPB-201ENST00000381342 ARL2-SNX15V9GYD0 113 aa11.62□□□□□ -0.55
SNRPB-201ENST00000381342 TRAV1-1A0A0B4J248 108 aa11.61□□□□□ -0.55
SNRPB-201ENST00000381342 TRBV7-9A0A0J9YWB2 115 aa11.61□□□□□ -0.55
SNRPB-201ENST00000381342 H7BYZ3 331 aa11.61□□□□□ -0.55
SNRPB-201ENST00000381342 K7EQM0 130 aa11.61□□□□□ -0.55
SNRPB-201ENST00000381342 HTN1P15515 57 aa11.61□□□□□ -0.55
SNRPB-201ENST00000381342 Q6ZQT7 251 aa11.61□□□□□ -0.55
SNRPB-201ENST00000381342 TVP23CQ96ET8 276 aa11.61□□□□□ -0.55
SNRPB-201ENST00000381342 NIPSNAP3BQ9BS92 247 aa11.61□□□□□ -0.55
SNRPB-201ENST00000381342 NKX6-2Q9C056 277 aaPredicted RBP11.61□□□□□ -0.55
SNRPB-201ENST00000381342 GNG13Q9P2W3 67 aa11.61□□□□□ -0.55
SNRPB-201ENST00000381342 LENEPQ9Y5L5 61 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms