RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 BAGE3Q86Y29 109 aa11.48□□□□□ -0.57
SNX2-201ENST00000379516 SSBP4Q9BWG4 385 aaPredicted RBP11.48□□□□□ -0.57
SNX2-201ENST00000379516 TP53TG3Q9ULZ0 132 aa11.48□□□□□ -0.57
SNX2-201ENST00000379516 HELZ2Q9BYK8 2649 aaKnown RBP11.48□□□□□ -0.57
SNX2-201ENST00000379516 IGHV7-4-1A0A0J9YVY3 117 aa11.48□□□□□ -0.57
SNX2-201ENST00000379516 SRIP30626 198 aa11.48□□□□□ -0.57
SNX2-201ENST00000379516 FOXA3P55318 350 aaPredicted RBP11.48□□□□□ -0.57
SNX2-201ENST00000379516 RPL11P62913 178 aaKnown RBP11.48□□□□□ -0.57
SNX2-201ENST00000379516 TMEM18Q96B42 140 aa11.48□□□□□ -0.57
SNX2-201ENST00000379516 MRPL53Q96EL3 112 aaKnown RBP11.48□□□□□ -0.57
SNX2-201ENST00000379516 RHPN1-AS1Q9BWJ2 59 aa11.48□□□□□ -0.57
SNX2-201ENST00000379516 DAZ1Q9NQZ3 744 aaKnown RBP11.48□□□□□ -0.57
SNX2-201ENST00000379516 ITPR3Q14573 2671 aa11.47□□□□□ -0.57
SNX2-201ENST00000379516 TMEM189A5PLL7 270 aa11.47□□□□□ -0.57
SNX2-201ENST00000379516 Q0VG73 95 aa11.47□□□□□ -0.57
SNX2-201ENST00000379516 FOXE3Q13461 319 aa11.47□□□□□ -0.57
SNX2-201ENST00000379516 TEX29Q8N6K0 151 aa11.47□□□□□ -0.57
SNX2-201ENST00000379516 TMSB15BA0A087X1C1 80 aa11.47□□□□□ -0.57
SNX2-201ENST00000379516 F2Z2F3 143 aa11.47□□□□□ -0.57
SNX2-201ENST00000379516 ELANEP08246 267 aa11.47□□□□□ -0.57
SNX2-201ENST00000379516 ZNF80P51504 273 aaPredicted RBP11.47□□□□□ -0.57
SNX2-201ENST00000379516 PRR31Q5SQ13 230 aa11.47□□□□□ -0.57
SNX2-201ENST00000379516 GPHB5Q86YW7 130 aa11.47□□□□□ -0.57
SNX2-201ENST00000379516 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
SNX2-201ENST00000379516 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
SNX2-201ENST00000379516 A8MWP6 167 aa11.46□□□□□ -0.57
SNX2-201ENST00000379516 BMI1P35226 326 aa11.46□□□□□ -0.57
SNX2-201ENST00000379516 TPPP3Q9BW30 176 aa11.46□□□□□ -0.57
SNX2-201ENST00000379516 IGKV3-7A0A075B6H7 116 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 K7EMT4 169 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 SERF1AO75920 110 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 TMEM78Q5T7P6 136 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 C20orf173Q96LM9 149 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 SMPXQ9UHP9 88 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 SELENOKQ9Y6D0 94 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 HAX1O00165 279 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 EDN2P20800 178 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 LINC00310P59036 64 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 OR10J3Q5JRS4 329 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 ZNF738Q8NE65 137 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 FOXC2Q99958 501 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 NRN1Q9NPD7 142 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 PDZD2O15018 2839 aa11.45□□□□□ -0.58
SNX2-201ENST00000379516 CCDC168Q8NDH2 2452 aa11.44□□□□□ -0.58
SNX2-201ENST00000379516 A0A1B0GUT8 65 aa11.44□□□□□ -0.58
SNX2-201ENST00000379516 ARMS2P0C7Q2 107 aa11.44□□□□□ -0.58
SNX2-201ENST00000379516 ZNF138P52744 262 aa11.44□□□□□ -0.58
SNX2-201ENST00000379516 UFC1Q9Y3C8 167 aa11.44□□□□□ -0.58
SNX2-201ENST00000379516 SOCS3O14543 225 aa11.44□□□□□ -0.58
SNX2-201ENST00000379516 Q6AWC8 147 aa11.44□□□□□ -0.58
SNX2-201ENST00000379516 FABP5P3A8MUU1 101 aa11.43□□□□□ -0.58
SNX2-201ENST00000379516 LGALS1P09382 135 aaKnown RBP11.43□□□□□ -0.58
SNX2-201ENST00000379516 ZNF705DP0CH99 300 aaPredicted RBP11.43□□□□□ -0.58
SNX2-201ENST00000379516 ZNF705BP0CI00 300 aaPredicted RBP11.43□□□□□ -0.58
SNX2-201ENST00000379516 RIGQ13278 110 aa11.43□□□□□ -0.58
SNX2-201ENST00000379516 C9orf47Q6ZRZ4 202 aa11.43□□□□□ -0.58
SNX2-201ENST00000379516 Q8N2B8 174 aa11.43□□□□□ -0.58
SNX2-201ENST00000379516 MYOZ3Q8TDC0 251 aa11.43□□□□□ -0.58
SNX2-201ENST00000379516 UBE2E2Q96LR5 201 aa11.43□□□□□ -0.58
SNX2-201ENST00000379516 ORM1P02763 201 aa11.42□□□□□ -0.58
SNX2-201ENST00000379516 ESDP10768 282 aa11.42□□□□□ -0.58
SNX2-201ENST00000379516 CDPF1Q6NVV7 123 aa11.42□□□□□ -0.58
SNX2-201ENST00000379516 TMEM86BQ8N661 226 aa11.42□□□□□ -0.58
SNX2-201ENST00000379516 BORCS7Q96B45 105 aa11.42□□□□□ -0.58
SNX2-201ENST00000379516 FAM181BA6NEQ2 426 aa11.42□□□□□ -0.58
SNX2-201ENST00000379516 SRD5A1P18405 259 aa11.42□□□□□ -0.58
SNX2-201ENST00000379516 RNF152Q8N8N0 203 aa11.42□□□□□ -0.58
SNX2-201ENST00000379516 ALKBH7Q9BT30 221 aaPredicted RBP11.42□□□□□ -0.58
SNX2-201ENST00000379516 IGHV4OR15-8A0A075B7B6 117 aa11.41□□□□□ -0.58
SNX2-201ENST00000379516 A0A087WW49 117 aa11.41□□□□□ -0.58
SNX2-201ENST00000379516 RPS20P60866 119 aaKnown RBP11.41□□□□□ -0.58
SNX2-201ENST00000379516 SSTP61278 116 aa11.41□□□□□ -0.58
SNX2-201ENST00000379516 IQCJQ1A5X6 159 aa11.41□□□□□ -0.58
SNX2-201ENST00000379516 LYZL1Q6UWQ5 148 aa11.41□□□□□ -0.58
SNX2-201ENST00000379516 C18orf32Q8TCD1 76 aa11.41□□□□□ -0.58
SNX2-201ENST00000379516 RCHY1Q96PM5 261 aa11.41□□□□□ -0.58
SNX2-201ENST00000379516 YAE1D1Q9NRH1 226 aa11.41□□□□□ -0.58
SNX2-201ENST00000379516 TMEM213A2RRL7 107 aa11.41□□□□□ -0.58
SNX2-201ENST00000379516 PAFAH1B2P68402 229 aa11.41□□□□□ -0.58
SNX2-201ENST00000379516 KRTAP1-1Q07627 177 aa11.41□□□□□ -0.58
SNX2-201ENST00000379516 JOSD1Q15040 202 aaPredicted RBP11.41□□□□□ -0.58
SNX2-201ENST00000379516 KLHDC1Q8N7A1 406 aa11.41□□□□□ -0.58
SNX2-201ENST00000379516 SAMD10Q9BYL1 202 aa11.41□□□□□ -0.58
SNX2-201ENST00000379516 FLNAP21333 2647 aaKnown RBP11.4□□□□□ -0.58
SNX2-201ENST00000379516 OVOL1O14753 267 aa11.4□□□□□ -0.58
SNX2-201ENST00000379516 CD5LO43866 347 aa11.4□□□□□ -0.58
SNX2-201ENST00000379516 SYNJ2BPP57105 145 aa11.4□□□□□ -0.58
SNX2-201ENST00000379516 OR10J6PQ8NGY7 276 aa11.4□□□□□ -0.58
SNX2-201ENST00000379516 TLN2Q9Y4G6 2542 aa11.39□□□□□ -0.59
SNX2-201ENST00000379516 A0A1B0GW15 77 aa11.39□□□□□ -0.59
SNX2-201ENST00000379516 DNAJC9-AS1A6NH13 148 aa11.39□□□□□ -0.59
SNX2-201ENST00000379516 DEFB1P60022 68 aa11.39□□□□□ -0.59
SNX2-201ENST00000379516 SRSF2Q01130 221 aaKnown RBP11.39□□□□□ -0.59
SNX2-201ENST00000379516 KLF5Q13887 457 aaPredicted RBP11.39□□□□□ -0.59
SNX2-201ENST00000379516 PPP1R14DQ9NXH3 145 aa11.39□□□□□ -0.59
SNX2-201ENST00000379516 UNC79Q9P2D8 2635 aa11.39□□□□□ -0.59
SNX2-201ENST00000379516 HOXD3P31249 432 aaPredicted RBP11.39□□□□□ -0.59
SNX2-201ENST00000379516 ZNF575Q86XF7 245 aa11.39□□□□□ -0.59
SNX2-201ENST00000379516 WFDC3Q8IUB2 231 aa11.39□□□□□ -0.59
SNX2-201ENST00000379516 FER1L6-AS1Q8NA97 138 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms