RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 S100A6P06703 90 aa13.14□□□□□ -0.31
THUMPD2-201ENST00000378727 RPL11P62913 178 aaKnown RBP13.14□□□□□ -0.31
THUMPD2-201ENST00000378727 CT83Q5H943 113 aa13.14□□□□□ -0.31
THUMPD2-201ENST00000378727 C4orf3Q8WVX3 66 aa13.14□□□□□ -0.31
THUMPD2-201ENST00000378727 NEU1Q99519 415 aa13.14□□□□□ -0.31
THUMPD2-201ENST00000378727 IZUMO1RA6ND01 250 aa13.14□□□□□ -0.31
THUMPD2-201ENST00000378727 FABP9Q0Z7S8 132 aa13.14□□□□□ -0.31
THUMPD2-201ENST00000378727 SAPCD1Q5SSQ6 148 aa13.14□□□□□ -0.31
THUMPD2-201ENST00000378727 NUP35Q8NFH5 326 aa13.14□□□□□ -0.31
THUMPD2-201ENST00000378727 CLEC5AQ9NY25 188 aa13.14□□□□□ -0.31
THUMPD2-201ENST00000378727 IGKV3-7A0A075B6H7 116 aa13.13□□□□□ -0.31
THUMPD2-201ENST00000378727 KLF5Q13887 457 aaPredicted RBP13.13□□□□□ -0.31
THUMPD2-201ENST00000378727 TCF24Q7RTU0 167 aa13.13□□□□□ -0.31
THUMPD2-201ENST00000378727 GTSF1Q8WW33 167 aa13.13□□□□□ -0.31
THUMPD2-201ENST00000378727 NAT8BQ9UHF3 227 aa13.13□□□□□ -0.31
THUMPD2-201ENST00000378727 TRAPPC1Q9Y5R8 145 aa13.13□□□□□ -0.31
THUMPD2-201ENST00000378727 HIGD1CA8MV81 97 aa13.12□□□□□ -0.31
THUMPD2-201ENST00000378727 CBLN1P23435 193 aa13.12□□□□□ -0.31
THUMPD2-201ENST00000378727 SLURP1P55000 103 aa13.12□□□□□ -0.31
THUMPD2-201ENST00000378727 KHDC1LQ5JSQ8 128 aa13.12□□□□□ -0.31
THUMPD2-201ENST00000378727 AGPAT4-IT1Q9H0P7 198 aa13.12□□□□□ -0.31
THUMPD2-201ENST00000378727 C16orf95Q9H693 158 aa13.12□□□□□ -0.31
THUMPD2-201ENST00000378727 A8MWL6 223 aa13.12□□□□□ -0.31
THUMPD2-201ENST00000378727 MRPL54Q6P161 138 aaKnown RBP13.12□□□□□ -0.31
THUMPD2-201ENST00000378727 OR4B1Q8NGF8 309 aa13.12□□□□□ -0.31
THUMPD2-201ENST00000378727 OR2D3Q8NGH3 330 aa13.12□□□□□ -0.31
THUMPD2-201ENST00000378727 LINC01006Q8NI28 216 aa13.12□□□□□ -0.31
THUMPD2-201ENST00000378727 CT45A10P0DMU9 189 aa13.11□□□□□ -0.31
THUMPD2-201ENST00000378727 ZNF80P51504 273 aaPredicted RBP13.11□□□□□ -0.31
THUMPD2-201ENST00000378727 NDUFA6P56556 154 aa13.11□□□□□ -0.31
THUMPD2-201ENST00000378727 RPL19P84098 196 aaKnown RBP13.11□□□□□ -0.31
THUMPD2-201ENST00000378727 OR11H1Q8NG94 326 aa13.11□□□□□ -0.31
THUMPD2-201ENST00000378727 DUX3Q96PT4 197 aa13.11□□□□□ -0.31
THUMPD2-201ENST00000378727 LINC01619G3V211 115 aa13.11□□□□□ -0.31
THUMPD2-201ENST00000378727 GZMBP10144 247 aa13.11□□□□□ -0.31
THUMPD2-201ENST00000378727 C9orf47Q6ZRZ4 202 aa13.11□□□□□ -0.31
THUMPD2-201ENST00000378727 ZNF738Q8NE65 137 aa13.11□□□□□ -0.31
THUMPD2-201ENST00000378727 KLHL30-AS1Q8NEE0 82 aa13.11□□□□□ -0.31
THUMPD2-201ENST00000378727 C2orf70A6NJV1 201 aa13.1□□□□□ -0.31
THUMPD2-201ENST00000378727 SH2D1AO60880 128 aa13.1□□□□□ -0.31
THUMPD2-201ENST00000378727 ZNF705DP0CH99 300 aaPredicted RBP13.1□□□□□ -0.31
THUMPD2-201ENST00000378727 ZNF705BP0CI00 300 aaPredicted RBP13.1□□□□□ -0.31
THUMPD2-201ENST00000378727 DCANP1Q8TF63 244 aa13.1□□□□□ -0.31
THUMPD2-201ENST00000378727 GFRA4Q9GZZ7 299 aa13.1□□□□□ -0.31
THUMPD2-201ENST00000378727 UBE2CO00762 179 aa13.09□□□□□ -0.31
THUMPD2-201ENST00000378727 BMI1P35226 326 aa13.09□□□□□ -0.31
THUMPD2-201ENST00000378727 DEFB1P60022 68 aa13.09□□□□□ -0.31
THUMPD2-201ENST00000378727 FAM162BQ5T6X4 162 aa13.09□□□□□ -0.31
THUMPD2-201ENST00000378727 ADAMTSL5Q6ZMM2 481 aa13.09□□□□□ -0.31
THUMPD2-201ENST00000378727 OR1N2Q8NGR9 330 aa13.09□□□□□ -0.31
THUMPD2-201ENST00000378727 GNB1LQ9BYB4 327 aa13.09□□□□□ -0.31
THUMPD2-201ENST00000378727 SNURFLB1AK76 121 aa13.09□□□□□ -0.31
THUMPD2-201ENST00000378727 CD28P10747 220 aa13.09□□□□□ -0.31
THUMPD2-201ENST00000378727 TMEM136Q6ZRR5 245 aa13.09□□□□□ -0.31
THUMPD2-201ENST00000378727 C11orf44Q8N8P7 122 aa13.09□□□□□ -0.31
THUMPD2-201ENST00000378727 NDFIP1Q9BT67 221 aa13.09□□□□□ -0.31
THUMPD2-201ENST00000378727 FAM231BA6NCW3 169 aa13.08□□□□□ -0.32
THUMPD2-201ENST00000378727 INAFM1C9JVW0 142 aa13.08□□□□□ -0.32
THUMPD2-201ENST00000378727 ZNF138P52744 262 aa13.08□□□□□ -0.32
THUMPD2-201ENST00000378727 SMUG1Q53HV7 270 aa13.08□□□□□ -0.32
THUMPD2-201ENST00000378727 TMEM78Q5T7P6 136 aa13.08□□□□□ -0.32
THUMPD2-201ENST00000378727 MRPL18Q9H0U6 180 aaKnown RBP13.08□□□□□ -0.32
THUMPD2-201ENST00000378727 WFDC12Q8WWY7 111 aa13.08□□□□□ -0.32
THUMPD2-201ENST00000378727 PGLYRP4Q96LB8 373 aa13.08□□□□□ -0.32
THUMPD2-201ENST00000378727 MS4A6AQ9H2W1 248 aa13.08□□□□□ -0.32
THUMPD2-201ENST00000378727 PPP1R14DQ9NXH3 145 aa13.08□□□□□ -0.32
THUMPD2-201ENST00000378727 HIVEP1P15822 2718 aa13.07□□□□□ -0.32
THUMPD2-201ENST00000378727 DPF1Q92782 380 aa13.07□□□□□ -0.32
THUMPD2-201ENST00000378727 A0A1B0GXF2 115 aa13.06□□□□□ -0.32
THUMPD2-201ENST00000378727 OVOL1O14753 267 aa13.06□□□□□ -0.32
THUMPD2-201ENST00000378727 HOXA5P20719 270 aa13.06□□□□□ -0.32
THUMPD2-201ENST00000378727 FOXA3P55318 350 aaPredicted RBP13.06□□□□□ -0.32
THUMPD2-201ENST00000378727 GDF5OSQ5U4N7 250 aa13.06□□□□□ -0.32
THUMPD2-201ENST00000378727 WDR73Q6P4I2 378 aa13.06□□□□□ -0.32
THUMPD2-201ENST00000378727 RBPMS2Q6ZRY4 209 aaKnown RBP13.06□□□□□ -0.32
THUMPD2-201ENST00000378727 WFDC3Q8IUB2 231 aa13.06□□□□□ -0.32
THUMPD2-201ENST00000378727 F6UB75 175 aa13.06□□□□□ -0.32
THUMPD2-201ENST00000378727 COX19Q49B96 90 aa13.06□□□□□ -0.32
THUMPD2-201ENST00000378727 RASL11AQ6T310 242 aa13.06□□□□□ -0.32
THUMPD2-201ENST00000378727 DLX4Q92988 240 aaPredicted RBP13.06□□□□□ -0.32
THUMPD2-201ENST00000378727 NDUFA7O95182 113 aa13.05□□□□□ -0.32
THUMPD2-201ENST00000378727 FOSL1P15407 271 aa13.05□□□□□ -0.32
THUMPD2-201ENST00000378727 GFI1BQ5VTD9 330 aa13.05□□□□□ -0.32
THUMPD2-201ENST00000378727 ATP5L2Q7Z4Y8 100 aa13.05□□□□□ -0.32
THUMPD2-201ENST00000378727 ZNF575Q86XF7 245 aa13.05□□□□□ -0.32
THUMPD2-201ENST00000378727 RAX2Q96IS3 184 aa13.05□□□□□ -0.32
THUMPD2-201ENST00000378727 JMJD8Q96S16 334 aa13.05□□□□□ -0.32
THUMPD2-201ENST00000378727 NSD1Q96L73 2696 aaPredicted RBP13.05□□□□□ -0.32
THUMPD2-201ENST00000378727 TMEM189A5PLL7 270 aa13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 HAX1O00165 279 aa13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 MT-ND6P03923 174 aa13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 TFPI2P48307 235 aa13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 RAB4BP61018 213 aa13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 SAMD13Q5VXD3 122 aa13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 OR9G4Q8NGQ1 327 aa13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 CITED2Q99967 270 aaPredicted RBP13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 SETD2Q9BYW2 2564 aaPredicted RBP13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 TMSB15BA0A087X1C1 80 aa13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 A0A1W2PRX2 142 aa13.04□□□□□ -0.32
THUMPD2-201ENST00000378727 ID1P41134 155 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms