RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 OR2T35Q8NGX2 323 aa12.05□□□□□ -0.48
RER1-202ENST00000378512 TMEM263Q8WUH6 116 aaKnown RBP12.05□□□□□ -0.48
RER1-202ENST00000378512 C16orf74Q96GX8 76 aa12.05□□□□□ -0.48
RER1-202ENST00000378512 FAM210BQ96KR6 192 aa12.05□□□□□ -0.48
RER1-202ENST00000378512 TRBV7-9A0A0J9YWB2 115 aa12.04□□□□□ -0.48
RER1-202ENST00000378512 SLC25A5P05141 298 aaKnown RBP12.04□□□□□ -0.48
RER1-202ENST00000378512 ATP6V0CP27449 155 aa12.04□□□□□ -0.48
RER1-202ENST00000378512 RAB2AP61019 212 aa12.04□□□□□ -0.48
RER1-202ENST00000378512 UBE2L3P68036 154 aaKnown RBP12.04□□□□□ -0.48
RER1-202ENST00000378512 SERF2P84101 59 aa12.04□□□□□ -0.48
RER1-202ENST00000378512 FAM122CQ6P4D5 195 aa12.04□□□□□ -0.48
RER1-202ENST00000378512 PQLC2Q6ZP29 291 aa12.04□□□□□ -0.48
RER1-202ENST00000378512 DNAH2Q9P225 4427 aa12.04□□□□□ -0.48
RER1-202ENST00000378512 RBAKDNA6NC62 111 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 ZNF324O75467 553 aaPredicted RBP12.03□□□□□ -0.48
RER1-202ENST00000378512 HSD17B11Q8NBQ5 300 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 INO80EQ8NBZ0 244 aaPredicted RBP12.03□□□□□ -0.48
RER1-202ENST00000378512 OR10G4Q8NGN3 311 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 OR10G9Q8NGN4 311 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 OR10G7Q8NGN6 311 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 VGLL1Q99990 258 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 LINC00467Q9BRT7 94 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 Q9H3A6 140 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 ZNF492Q9P255 531 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 IGKV2-40A0A087WW87 121 aaPredicted RBP12.03□□□□□ -0.48
RER1-202ENST00000378512 IGKV2D-40P01614 121 aaPredicted RBP12.03□□□□□ -0.48
RER1-202ENST00000378512 DAD1P61803 113 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 RANP62826 216 aaKnown RBP12.03□□□□□ -0.48
RER1-202ENST00000378512 ZFAND2AQ8N6M9 145 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 ARL6IP6Q8N6S5 226 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 SUN5Q8TC36 379 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 PYGO2Q9BRQ0 406 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 KRTAP17-1Q9BYP8 105 aa12.03□□□□□ -0.48
RER1-202ENST00000378512 FAT2Q9NYQ8 4349 aa12.02□□□□□ -0.49
RER1-202ENST00000378512 TRAV12-3A0A0B4J271 114 aa12.02□□□□□ -0.49
RER1-202ENST00000378512 A0A1W2PPV4 95 aa12.02□□□□□ -0.49
RER1-202ENST00000378512 EIF3GO75821 320 aaKnown RBP eCLIP12.02□□□□□ -0.49
RER1-202ENST00000378512 STAG3L2P0CL84 134 aa12.02□□□□□ -0.49
RER1-202ENST00000378512 STAG3L3P0CL85 134 aa12.02□□□□□ -0.49
RER1-202ENST00000378512 LINC00612Q8N6U2 182 aa12.02□□□□□ -0.49
RER1-202ENST00000378512 NDUFAF3Q9BU61 184 aa12.02□□□□□ -0.49
RER1-202ENST00000378512 TIMM8BQ9Y5J9 83 aaPredicted RBP12.02□□□□□ -0.49
RER1-202ENST00000378512 FXYD6-FXYD2A0A087WZ82 144 aa12.01□□□□□ -0.49
RER1-202ENST00000378512 C7orf71A4D174 169 aa12.01□□□□□ -0.49
RER1-202ENST00000378512 CD300CQ08708 224 aa12.01□□□□□ -0.49
RER1-202ENST00000378512 TMEM78Q5T7P6 136 aa12.01□□□□□ -0.49
RER1-202ENST00000378512 RPL7L1Q6DKI1 246 aaKnown RBP12.01□□□□□ -0.49
RER1-202ENST00000378512 SH3BGRL3Q9H299 93 aa12.01□□□□□ -0.49
RER1-202ENST00000378512 DIRC3C9JPN6 131 aa12□□□□□ -0.49
RER1-202ENST00000378512 MBP02144 154 aa12□□□□□ -0.49
RER1-202ENST00000378512 CDC34P49427 236 aaPredicted RBP12□□□□□ -0.49
RER1-202ENST00000378512 ZNF138P52744 262 aa12□□□□□ -0.49
RER1-202ENST00000378512 PRR9Q5T870 116 aa12□□□□□ -0.49
RER1-202ENST00000378512 OTORQ9NRC9 128 aa12□□□□□ -0.49
RER1-202ENST00000378512 LENEPQ9Y5L5 61 aa12□□□□□ -0.49
RER1-202ENST00000378512 DNAH17Q9UFH2 4485 aa11.99□□□□□ -0.49
RER1-202ENST00000378512 J3KRW8 73 aa11.99□□□□□ -0.49
RER1-202ENST00000378512 HTN1P15515 57 aa11.99□□□□□ -0.49
RER1-202ENST00000378512 CSN1S1P47710 185 aa11.99□□□□□ -0.49
RER1-202ENST00000378512 BTN1A1Q13410 526 aa11.99□□□□□ -0.49
RER1-202ENST00000378512 RXFP4Q8TDU9 374 aa11.99□□□□□ -0.49
RER1-202ENST00000378512 TMED6Q8WW62 240 aa11.99□□□□□ -0.49
RER1-202ENST00000378512 RAB24Q969Q5 203 aa11.99□□□□□ -0.49
RER1-202ENST00000378512 GNPNAT1Q96EK6 184 aaPredicted RBP11.99□□□□□ -0.49
RER1-202ENST00000378512 CBY3A6NI87 242 aa11.98□□□□□ -0.49
RER1-202ENST00000378512 ARL14EPLP0DKL9 152 aa11.98□□□□□ -0.49
RER1-202ENST00000378512 ANXA2RQ3ZCQ2 193 aa11.98□□□□□ -0.49
RER1-202ENST00000378512 CCDC28AQ8IWP9 274 aa11.98□□□□□ -0.49
RER1-202ENST00000378512 C11orf72Q8NBR9 251 aa11.98□□□□□ -0.49
RER1-202ENST00000378512 BORCS7-ASMTA0A0B4J1R7 106 aa11.97□□□□□ -0.49
RER1-202ENST00000378512 PGPA6NDG6 321 aa11.97□□□□□ -0.49
RER1-202ENST00000378512 TAAR5O14804 337 aa11.97□□□□□ -0.49
RER1-202ENST00000378512 HMGB3O15347 200 aaKnown RBP11.97□□□□□ -0.49
RER1-202ENST00000378512 GPX1P07203 203 aa11.97□□□□□ -0.49
RER1-202ENST00000378512 DAZ2Q13117 558 aaKnown RBP11.97□□□□□ -0.49
RER1-202ENST00000378512 NOP10Q9NPE3 64 aaKnown RBP11.97□□□□□ -0.49
RER1-202ENST00000378512 CYTL1Q9NRR1 136 aa11.97□□□□□ -0.49
RER1-202ENST00000378512 KIAA1109Q2LD37 5005 aa11.97□□□□□ -0.49
RER1-202ENST00000378512 DEFB130BP0DP73 79 aa11.96□□□□□ -0.49
RER1-202ENST00000378512 DEFB130AP0DP74 79 aa11.96□□□□□ -0.49
RER1-202ENST00000378512 RNASE4P34096 147 aaKnown RBP11.96□□□□□ -0.49
RER1-202ENST00000378512 SSX7Q7RTT5 188 aa11.96□□□□□ -0.49
RER1-202ENST00000378512 Q8TAT8 98 aa11.96□□□□□ -0.49
RER1-202ENST00000378512 ARPC5O15511 151 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 ATP5G1P05496 136 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 P0DMU3 169 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 FAM231AP0DMU4 169 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 FAM231CP0DMU5 169 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 GCHFRP30047 84 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 ATP5G3P48201 142 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 ZNF345Q14585 488 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 FAM74A1Q5RGS3 127 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 TMEM88Q6PEY1 159 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 Q6ZQT7 251 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 EIF4E3Q8N5X7 224 aaKnown RBP11.95□□□□□ -0.5
RER1-202ENST00000378512 ZNF680Q8NEM1 530 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 ST6GAL2Q96JF0 529 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 NACAE9PAV3 2078 aa11.95□□□□□ -0.5
RER1-202ENST00000378512 HMSDA8MTL9 139 aa11.94□□□□□ -0.5
RER1-202ENST00000378512 HTN3P15516 51 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms