RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 PDE6HQ13956 83 aa14.01□□□□□ -0.17
GNE-201ENST00000377902 IGF2-ASQ6U949 168 aa14□□□□□ -0.17
GNE-201ENST00000377902 NCBP2LA6PVI3 153 aaKnown RBP14□□□□□ -0.17
GNE-201ENST00000377902 K7EP34 96 aa14□□□□□ -0.17
GNE-201ENST00000377902 GTF2H5Q6ZYL4 71 aa14□□□□□ -0.17
GNE-201ENST00000377902 OR2K2Q8NGT1 345 aa14□□□□□ -0.17
GNE-201ENST00000377902 RNF5Q99942 180 aa14□□□□□ -0.17
GNE-201ENST00000377902 B9A039 149 aa13.99□□□□□ -0.17
GNE-201ENST00000377902 PRAC2D3DTV9 90 aa13.99□□□□□ -0.17
GNE-201ENST00000377902 GRNP28799 593 aaKnown RBP13.99□□□□□ -0.17
GNE-201ENST00000377902 LEPP41159 167 aa13.99□□□□□ -0.17
GNE-201ENST00000377902 SRSF8Q9BRL6 282 aaKnown RBP13.99□□□□□ -0.17
GNE-201ENST00000377902 C21orf62Q9NYP8 219 aa13.99□□□□□ -0.17
GNE-201ENST00000377902 DPM3Q9P2X0 92 aa13.99□□□□□ -0.17
GNE-201ENST00000377902 IGLC6P0CF74 106 aa13.99□□□□□ -0.17
GNE-201ENST00000377902 OR9G4Q8NGQ1 327 aa13.99□□□□□ -0.17
GNE-201ENST00000377902 RAB1BQ9H0U4 201 aa13.99□□□□□ -0.17
GNE-201ENST00000377902 C5orf64Q2M2E5 130 aa13.98□□□□□ -0.17
GNE-201ENST00000377902 ZNF672Q499Z4 452 aaPredicted RBP13.98□□□□□ -0.17
GNE-201ENST00000377902 DYNAPQ8N1N2 210 aa13.98□□□□□ -0.17
GNE-201ENST00000377902 RNF182Q8N6D2 247 aa13.98□□□□□ -0.17
GNE-201ENST00000377902 IGHV3-66A0A0C4DH42 116 aa13.98□□□□□ -0.17
GNE-201ENST00000377902 CD3EP07766 207 aa13.98□□□□□ -0.17
GNE-201ENST00000377902 K7ERJ3 54 aa13.97□□□□□ -0.17
GNE-201ENST00000377902 GCSHP23434 173 aa13.97□□□□□ -0.17
GNE-201ENST00000377902 FXYD2P54710 66 aa13.97□□□□□ -0.17
GNE-201ENST00000377902 HHLA3Q9XRX5 114 aa13.97□□□□□ -0.17
GNE-201ENST00000377902 HRNRQ86YZ3 2850 aaPredicted RBP13.97□□□□□ -0.17
GNE-201ENST00000377902 NDUFA3O95167 84 aa13.97□□□□□ -0.17
GNE-201ENST00000377902 CTSGP08311 255 aa13.97□□□□□ -0.17
GNE-201ENST00000377902 ARPC1AQ92747 370 aa13.97□□□□□ -0.17
GNE-201ENST00000377902 PSMG3-AS1Q96PY0 264 aa13.97□□□□□ -0.17
GNE-201ENST00000377902 SPCS1Q9Y6A9 102 aa13.97□□□□□ -0.17
GNE-201ENST00000377902 TLN1Q9Y490 2541 aaKnown RBP13.97□□□□□ -0.17
GNE-201ENST00000377902 A0A1W2PPM0 123 aa13.96□□□□□ -0.17
GNE-201ENST00000377902 NPBQ8NG41 125 aa13.96□□□□□ -0.17
GNE-201ENST00000377902 OR4X2Q8NGF9 303 aa13.96□□□□□ -0.17
GNE-201ENST00000377902 NBASA2RRP1 2371 aa13.96□□□□□ -0.17
GNE-201ENST00000377902 IGHV3OR16-13A0A075B7E8 117 aa13.96□□□□□ -0.17
GNE-201ENST00000377902 IGHV3-74A0A0B4J1X5 117 aa13.96□□□□□ -0.17
GNE-201ENST00000377902 PRSS1P07477 247 aa13.96□□□□□ -0.17
GNE-201ENST00000377902 RPL7P18124 248 aaKnown RBP13.96□□□□□ -0.17
GNE-201ENST00000377902 ODF1Q14990 250 aa13.96□□□□□ -0.17
GNE-201ENST00000377902 GTSCR1Q86UQ5 136 aa13.96□□□□□ -0.17
GNE-201ENST00000377902 MAP1LC3AQ9H492 121 aa13.96□□□□□ -0.17
GNE-201ENST00000377902 TNFRSF6BO95407 300 aa13.95□□□□□ -0.18
GNE-201ENST00000377902 ZNF562Q6V9R5 426 aa13.95□□□□□ -0.18
GNE-201ENST00000377902 Q6ZQT7 251 aa13.95□□□□□ -0.18
GNE-201ENST00000377902 ANKHD1Q8IWZ3 2542 aaKnown RBP13.95□□□□□ -0.18
GNE-201ENST00000377902 SIVA1O15304 175 aa13.95□□□□□ -0.18
GNE-201ENST00000377902 G3V4G9 280 aa13.94□□□□□ -0.18
GNE-201ENST00000377902 BMI1P35226 326 aa13.94□□□□□ -0.18
GNE-201ENST00000377902 IL17RELQ6ZVW7 336 aa13.94□□□□□ -0.18
GNE-201ENST00000377902 COX8CQ7Z4L0 72 aa13.94□□□□□ -0.18
GNE-201ENST00000377902 LY6G5BQ8NDX9 201 aa13.94□□□□□ -0.18
GNE-201ENST00000377902 OR11H6Q8NGC7 330 aa13.93□□□□□ -0.18
GNE-201ENST00000377902 TMEM158Q8WZ71 300 aa13.93□□□□□ -0.18
GNE-201ENST00000377902 FOXC2Q99958 501 aa13.93□□□□□ -0.18
GNE-201ENST00000377902 COL25A1Q9BXS0 654 aaPredicted RBP13.93□□□□□ -0.18
GNE-201ENST00000377902 TRAV26-2A0A0B4J265 109 aa13.93□□□□□ -0.18
GNE-201ENST00000377902 TRGV3P03979 118 aa13.93□□□□□ -0.18
GNE-201ENST00000377902 SAMD5Q5TGI4 173 aa13.92□□□□□ -0.18
GNE-201ENST00000377902 NEGR1Q7Z3B1 354 aa13.92□□□□□ -0.18
GNE-201ENST00000377902 DTX2Q86UW9 622 aa13.92□□□□□ -0.18
GNE-201ENST00000377902 TTC9CQ8N5M4 171 aa13.92□□□□□ -0.18
GNE-201ENST00000377902 IGHV3-49A0A0A0MS15 119 aa13.92□□□□□ -0.18
GNE-201ENST00000377902 FAM90A27PA6NNH2 459 aa13.92□□□□□ -0.18
GNE-201ENST00000377902 FABP5P3A8MUU1 101 aa13.92□□□□□ -0.18
GNE-201ENST00000377902 FCER1GP30273 86 aa13.92□□□□□ -0.18
GNE-201ENST00000377902 C11orf21Q9P2W6 132 aa13.92□□□□□ -0.18
GNE-201ENST00000377902 FBLL1A6NHQ2 334 aaKnown RBP13.91□□□□□ -0.18
GNE-201ENST00000377902 NPFFR1Q9GZQ6 430 aa13.91□□□□□ -0.18
GNE-201ENST00000377902 S100A7AQ86SG5 101 aa13.91□□□□□ -0.18
GNE-201ENST00000377902 CHAC1Q9BUX1 264 aa13.91□□□□□ -0.18
GNE-201ENST00000377902 ZMAT4Q9H898 229 aa13.91□□□□□ -0.18
GNE-201ENST00000377902 TMEM160Q9NX00 188 aa13.91□□□□□ -0.18
GNE-201ENST00000377902 CELSR1Q9NYQ6 3014 aa13.91□□□□□ -0.18
GNE-201ENST00000377902 IGKV3D-20A0A0C4DH25 116 aa13.9□□□□□ -0.18
GNE-201ENST00000377902 TMEM8BA6NDV4 472 aa13.9□□□□□ -0.18
GNE-201ENST00000377902 SMIM13P0DJ93 91 aa13.9□□□□□ -0.18
GNE-201ENST00000377902 ZC2HC1BQ5TFG8 222 aa13.9□□□□□ -0.18
GNE-201ENST00000377902 TMEM190Q8WZ59 177 aa13.9□□□□□ -0.18
GNE-201ENST00000377902 CEP295Q9C0D2 2601 aa13.9□□□□□ -0.18
GNE-201ENST00000377902 TRBV25-1A0A075B6N4 114 aa13.9□□□□□ -0.18
GNE-201ENST00000377902 TRAV40A0A0B4J280 105 aa13.9□□□□□ -0.18
GNE-201ENST00000377902 IGKCP01834 107 aa13.9□□□□□ -0.18
GNE-201ENST00000377902 ZNF48Q96MX3 618 aaPredicted RBP13.9□□□□□ -0.18
GNE-201ENST00000377902 FABP2P12104 132 aa13.89□□□□□ -0.19
GNE-201ENST00000377902 CEACAM3P40198 252 aa13.89□□□□□ -0.19
GNE-201ENST00000377902 ODF3BA8MYP8 253 aa13.89□□□□□ -0.19
GNE-201ENST00000377902 MAPKAPK5-AS1Q8N8E1 139 aa13.89□□□□□ -0.19
GNE-201ENST00000377902 CNFNQ9BYD5 112 aa13.89□□□□□ -0.19
GNE-201ENST00000377902 NHP2Q9NX24 153 aaKnown RBP13.89□□□□□ -0.19
GNE-201ENST00000377902 SPTA1P02549 2419 aa13.88□□□□□ -0.19
GNE-201ENST00000377902 IGHV7-81A0A0B4J1V7 117 aa13.88□□□□□ -0.19
GNE-201ENST00000377902 ZNF207O43670 478 aaKnown RBP13.88□□□□□ -0.19
GNE-201ENST00000377902 LINC01546A6NGU7 62 aa13.87□□□□□ -0.19
GNE-201ENST00000377902 SPRY2O43597 315 aa13.87□□□□□ -0.19
GNE-201ENST00000377902 CLEC3BP05452 202 aa13.87□□□□□ -0.19
GNE-201ENST00000377902 SMIM17P0DL12 118 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms