RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CD5LO43866 347 aa11.28□□□□□ -0.6
MSH5-201ENST00000375703 FOXE3Q13461 319 aa11.28□□□□□ -0.6
MSH5-201ENST00000375703 C2orf91Q6ZV80 131 aa11.28□□□□□ -0.6
MSH5-201ENST00000375703 SRSF2Q01130 221 aaKnown RBP11.28□□□□□ -0.6
MSH5-201ENST00000375703 PAX8Q06710 450 aa11.28□□□□□ -0.6
MSH5-201ENST00000375703 KLRB1Q12918 225 aa11.28□□□□□ -0.6
MSH5-201ENST00000375703 ECSCRQ19T08 205 aa11.28□□□□□ -0.6
MSH5-201ENST00000375703 ZNF502Q8TBZ5 544 aa11.28□□□□□ -0.6
MSH5-201ENST00000375703 DPF1Q92782 380 aa11.28□□□□□ -0.6
MSH5-201ENST00000375703 SIRPDQ9H106 197 aa11.28□□□□□ -0.6
MSH5-201ENST00000375703 MSRB1Q9NZV6 116 aa11.28□□□□□ -0.6
MSH5-201ENST00000375703 CACNG7P62955 275 aa11.27□□□□□ -0.61
MSH5-201ENST00000375703 FAM110DQ8TAY7 271 aaPredicted RBP11.27□□□□□ -0.61
MSH5-201ENST00000375703 PTPRQQ9UMZ3 2332 aa11.27□□□□□ -0.61
MSH5-201ENST00000375703 PRAC2D3DTV9 90 aa11.27□□□□□ -0.61
MSH5-201ENST00000375703 K7EP13 123 aa11.27□□□□□ -0.61
MSH5-201ENST00000375703 OR1N2Q8NGR9 330 aa11.27□□□□□ -0.61
MSH5-201ENST00000375703 IFI27L1Q96BM0 104 aa11.27□□□□□ -0.61
MSH5-201ENST00000375703 BUB3O43684 328 aa11.26□□□□□ -0.61
MSH5-201ENST00000375703 NDUFS7O75251 213 aa11.26□□□□□ -0.61
MSH5-201ENST00000375703 GOSR1O95249 250 aa11.26□□□□□ -0.61
MSH5-201ENST00000375703 RAB9AP51151 201 aa11.26□□□□□ -0.61
MSH5-201ENST00000375703 PRSS57Q6UWY2 283 aa11.26□□□□□ -0.61
MSH5-201ENST00000375703 DTX2Q86UW9 622 aa11.26□□□□□ -0.61
MSH5-201ENST00000375703 RNF182Q8N6D2 247 aa11.26□□□□□ -0.61
MSH5-201ENST00000375703 IGHV3-66A0A0C4DH42 116 aa11.25□□□□□ -0.61
MSH5-201ENST00000375703 TMEM97Q5BJF2 176 aa11.25□□□□□ -0.61
MSH5-201ENST00000375703 AMMECR1LQ6DCA0 310 aa11.25□□□□□ -0.61
MSH5-201ENST00000375703 RNF185Q96GF1 192 aa11.25□□□□□ -0.61
MSH5-201ENST00000375703 ZFAND3Q9H8U3 227 aa11.25□□□□□ -0.61
MSH5-201ENST00000375703 CHTOPQ9Y3Y2 248 aaKnown RBP11.25□□□□□ -0.61
MSH5-201ENST00000375703 MUC6Q6W4X9 2439 aa11.25□□□□□ -0.61
MSH5-201ENST00000375703 ATP6V0E1O15342 81 aa11.25□□□□□ -0.61
MSH5-201ENST00000375703 FGF6P10767 208 aa11.25□□□□□ -0.61
MSH5-201ENST00000375703 UBE2E1P51965 193 aa11.25□□□□□ -0.61
MSH5-201ENST00000375703 VPS25Q9BRG1 176 aa11.25□□□□□ -0.61
MSH5-201ENST00000375703 MAP1LC3AQ9H492 121 aa11.25□□□□□ -0.61
MSH5-201ENST00000375703 PPBPP02775 128 aa11.24□□□□□ -0.61
MSH5-201ENST00000375703 TCTAP57738 103 aa11.24□□□□□ -0.61
MSH5-201ENST00000375703 CLEC19AQ6UXS0 136 aa11.24□□□□□ -0.61
MSH5-201ENST00000375703 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.24□□□□□ -0.61
MSH5-201ENST00000375703 PPIFP30405 207 aaKnown RBP11.24□□□□□ -0.61
MSH5-201ENST00000375703 WFDC3Q8IUB2 231 aa11.24□□□□□ -0.61
MSH5-201ENST00000375703 CNFNQ9BYD5 112 aa11.24□□□□□ -0.61
MSH5-201ENST00000375703 CEP295Q9C0D2 2601 aa11.24□□□□□ -0.61
MSH5-201ENST00000375703 IGHV3OR16-13A0A075B7E8 117 aa11.23□□□□□ -0.61
MSH5-201ENST00000375703 IGHV3-74A0A0B4J1X5 117 aa11.23□□□□□ -0.61
MSH5-201ENST00000375703 IL17RELQ6ZVW7 336 aa11.23□□□□□ -0.61
MSH5-201ENST00000375703 AJUBAQ96IF1 538 aa11.23□□□□□ -0.61
MSH5-201ENST00000375703 SLC50A1Q9BRV3 221 aa11.23□□□□□ -0.61
MSH5-201ENST00000375703 RAXQ9Y2V3 346 aa11.23□□□□□ -0.61
MSH5-201ENST00000375703 A0A1W2PPR1 153 aa11.23□□□□□ -0.61
MSH5-201ENST00000375703 RBAKDNA6NC62 111 aa11.23□□□□□ -0.61
MSH5-201ENST00000375703 G3V318 75 aa11.23□□□□□ -0.61
MSH5-201ENST00000375703 GAS8-AS1O95177 125 aa11.23□□□□□ -0.61
MSH5-201ENST00000375703 LINC01559Q495D7 138 aa11.23□□□□□ -0.61
MSH5-201ENST00000375703 BOD1L2Q8IYS8 172 aa11.23□□□□□ -0.61
MSH5-201ENST00000375703 PSMG3-AS1Q96PY0 264 aa11.23□□□□□ -0.61
MSH5-201ENST00000375703 CLPSL1A2RUU4 121 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 LINC01548A6NM66 108 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 CIDEAO60543 219 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 SAA4P35542 130 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 UCNP55089 124 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 SEC11AP67812 179 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 C7orf71A4D174 169 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 KLK9Q2XQG4 91 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 SMIM15Q7Z3B0 74 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 C18orf15Q96N68 181 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 AGPAT4-IT1Q9H0P7 198 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 KLK9Q9UKQ9 250 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 TMEM238LA0A1B0GVL6 79 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 TNFRSF6BO95407 300 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 LEPP41159 167 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 CCDC140Q96MF4 163 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 NPFFR1Q9GZQ6 430 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 DKK2Q9UBU2 259 aa11.22□□□□□ -0.61
MSH5-201ENST00000375703 PEF1Q9UBV8 284 aaKnown RBP11.22□□□□□ -0.61
MSH5-201ENST00000375703 SPTA1P02549 2419 aa11.21□□□□□ -0.61
MSH5-201ENST00000375703 IGHV3-49A0A0A0MS15 119 aa11.21□□□□□ -0.61
MSH5-201ENST00000375703 SMAD7O15105 426 aaKnown RBP11.21□□□□□ -0.61
MSH5-201ENST00000375703 EVI2AP22794 236 aa11.21□□□□□ -0.61
MSH5-201ENST00000375703 UQCRFS1P47985 274 aa11.21□□□□□ -0.61
MSH5-201ENST00000375703 TRAV8-6A0A0B4J262 113 aa11.21□□□□□ -0.62
MSH5-201ENST00000375703 IGKV3D-20A0A0C4DH25 116 aa11.21□□□□□ -0.62
MSH5-201ENST00000375703 A1L4Q6 167 aa11.21□□□□□ -0.62
MSH5-201ENST00000375703 ZNF207O43670 478 aaKnown RBP11.21□□□□□ -0.62
MSH5-201ENST00000375703 EEF1AKMT3Q96AZ1 226 aa11.21□□□□□ -0.62
MSH5-201ENST00000375703 NXT2Q9NPJ8 142 aaKnown RBP11.21□□□□□ -0.62
MSH5-201ENST00000375703 TMEM238C9JI98 176 aa11.2□□□□□ -0.62
MSH5-201ENST00000375703 FCER1GP30273 86 aa11.2□□□□□ -0.62
MSH5-201ENST00000375703 OR9G4Q8NGQ1 327 aa11.2□□□□□ -0.62
MSH5-201ENST00000375703 UBTD1Q9HAC8 227 aa11.2□□□□□ -0.62
MSH5-201ENST00000375703 LINC01546A6NGU7 62 aa11.2□□□□□ -0.62
MSH5-201ENST00000375703 GATA1P15976 413 aaPredicted RBP11.2□□□□□ -0.62
MSH5-201ENST00000375703 NMUP48645 174 aa11.2□□□□□ -0.62
MSH5-201ENST00000375703 TMEM78Q5T7P6 136 aa11.2□□□□□ -0.62
MSH5-201ENST00000375703 METTL26Q96S19 204 aa11.2□□□□□ -0.62
MSH5-201ENST00000375703 WNK2Q9Y3S1 2297 aa11.19□□□□□ -0.62
MSH5-201ENST00000375703 HRNRQ86YZ3 2850 aaPredicted RBP11.19□□□□□ -0.62
MSH5-201ENST00000375703 TRBV7-1A0A0A6YYK4 115 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms