RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 CBY3A6NI87 242 aa13.94□□□□□ -0.18
PHF1-201ENST00000374512 ANKRD39Q53RE8 183 aa13.94□□□□□ -0.18
PHF1-201ENST00000374512 VGLL1Q99990 258 aa13.94□□□□□ -0.18
PHF1-201ENST00000374512 ATRXP46100 2492 aa13.94□□□□□ -0.18
PHF1-201ENST00000374512 C7orf71A4D174 169 aa13.94□□□□□ -0.18
PHF1-201ENST00000374512 NPYP01303 97 aa13.94□□□□□ -0.18
PHF1-201ENST00000374512 ZNF80P51504 273 aaPredicted RBP13.94□□□□□ -0.18
PHF1-201ENST00000374512 CACNG7P62955 275 aa13.94□□□□□ -0.18
PHF1-201ENST00000374512 MAP1LC3AQ9H492 121 aa13.94□□□□□ -0.18
PHF1-201ENST00000374512 SMAD7O15105 426 aaKnown RBP13.93□□□□□ -0.18
PHF1-201ENST00000374512 TMEM11P17152 192 aa13.93□□□□□ -0.18
PHF1-201ENST00000374512 OR4X2Q8NGF9 303 aa13.93□□□□□ -0.18
PHF1-201ENST00000374512 SPTBN4Q9H254 2564 aa13.93□□□□□ -0.18
PHF1-201ENST00000374512 HSD52Q0P140 79 aa13.92□□□□□ -0.18
PHF1-201ENST00000374512 DTX2Q86UW9 622 aa13.92□□□□□ -0.18
PHF1-201ENST00000374512 NXT2Q9NPJ8 142 aaKnown RBP13.92□□□□□ -0.18
PHF1-201ENST00000374512 IGHV7-81A0A0B4J1V7 117 aa13.92□□□□□ -0.18
PHF1-201ENST00000374512 FAM110DQ8TAY7 271 aaPredicted RBP13.92□□□□□ -0.18
PHF1-201ENST00000374512 COL6A6A6NMZ7 2263 aa13.92□□□□□ -0.18
PHF1-201ENST00000374512 A1L4Q6 167 aa13.91□□□□□ -0.18
PHF1-201ENST00000374512 H3BRM9 83 aa13.91□□□□□ -0.18
PHF1-201ENST00000374512 NDUFS7O75251 213 aa13.91□□□□□ -0.18
PHF1-201ENST00000374512 ORM1P02763 201 aa13.91□□□□□ -0.18
PHF1-201ENST00000374512 PRB4P10163 310 aaPredicted RBP13.91□□□□□ -0.18
PHF1-201ENST00000374512 ZNF575Q86XF7 245 aa13.91□□□□□ -0.18
PHF1-201ENST00000374512 DYNAPQ8N1N2 210 aa13.91□□□□□ -0.18
PHF1-201ENST00000374512 Q8TAT8 98 aa13.91□□□□□ -0.18
PHF1-201ENST00000374512 SLC50A1Q9BRV3 221 aa13.91□□□□□ -0.18
PHF1-201ENST00000374512 RNF185Q96GF1 192 aa13.91□□□□□ -0.18
PHF1-201ENST00000374512 PSMG3-AS1Q96PY0 264 aa13.91□□□□□ -0.18
PHF1-201ENST00000374512 CST9LQ9H4G1 147 aa13.91□□□□□ -0.18
PHF1-201ENST00000374512 IGHV3-23P01764 117 aa13.9□□□□□ -0.18
PHF1-201ENST00000374512 LY6DQ14210 128 aa13.9□□□□□ -0.18
PHF1-201ENST00000374512 ZNF502Q8TBZ5 544 aa13.9□□□□□ -0.18
PHF1-201ENST00000374512 Q8N9W7 124 aa13.9□□□□□ -0.18
PHF1-201ENST00000374512 LRBAP50851 2863 aa13.89□□□□□ -0.19
PHF1-201ENST00000374512 TRAV8-6A0A0B4J262 113 aa13.89□□□□□ -0.19
PHF1-201ENST00000374512 BUB3O43684 328 aa13.89□□□□□ -0.19
PHF1-201ENST00000374512 GOSR1O95249 250 aa13.89□□□□□ -0.19
PHF1-201ENST00000374512 FCER1GP30273 86 aa13.89□□□□□ -0.19
PHF1-201ENST00000374512 PRORYQ9H606 182 aa13.89□□□□□ -0.19
PHF1-201ENST00000374512 SMKR1H3BMG3 65 aa13.88□□□□□ -0.19
PHF1-201ENST00000374512 SNAI2O43623 268 aa13.88□□□□□ -0.19
PHF1-201ENST00000374512 OCIAD2Q56VL3 154 aa13.88□□□□□ -0.19
PHF1-201ENST00000374512 ERASQ7Z444 233 aa13.88□□□□□ -0.19
PHF1-201ENST00000374512 AP1S3Q96PC3 154 aa13.88□□□□□ -0.19
PHF1-201ENST00000374512 ZFAND3Q9H8U3 227 aa13.88□□□□□ -0.19
PHF1-201ENST00000374512 C9orf118A6NHY6 69 aa13.88□□□□□ -0.19
PHF1-201ENST00000374512 ZFP36P26651 326 aaKnown RBP13.88□□□□□ -0.19
PHF1-201ENST00000374512 PRSS57Q6UWY2 283 aa13.88□□□□□ -0.19
PHF1-201ENST00000374512 GTF2H5Q6ZYL4 71 aa13.88□□□□□ -0.19
PHF1-201ENST00000374512 MRPL53Q96EL3 112 aaKnown RBP13.88□□□□□ -0.19
PHF1-201ENST00000374512 C15orf32Q32M92 178 aa13.87□□□□□ -0.19
PHF1-201ENST00000374512 ADAMTSL5Q6ZMM2 481 aa13.87□□□□□ -0.19
PHF1-201ENST00000374512 ZMAT4Q9H898 229 aa13.87□□□□□ -0.19
PHF1-201ENST00000374512 HIF1ANQ9NWT6 349 aa13.87□□□□□ -0.19
PHF1-201ENST00000374512 SMPXQ9UHP9 88 aa13.87□□□□□ -0.19
PHF1-201ENST00000374512 DCHS2Q6V1P9 2916 aa13.87□□□□□ -0.19
PHF1-201ENST00000374512 GAGE12BA1L429 117 aa13.87□□□□□ -0.19
PHF1-201ENST00000374512 TNFRSF6BO95407 300 aa13.87□□□□□ -0.19
PHF1-201ENST00000374512 HLA-DMBP28068 263 aa13.87□□□□□ -0.19
PHF1-201ENST00000374512 SIRPDQ9H106 197 aa13.87□□□□□ -0.19
PHF1-201ENST00000374512 TACC2O95359 2948 aa13.87□□□□□ -0.19
PHF1-201ENST00000374512 RELNP78509 3460 aa13.86□□□□□ -0.19
PHF1-201ENST00000374512 GAGE10A6NGK3 116 aa13.86□□□□□ -0.19
PHF1-201ENST00000374512 FOXE3Q13461 319 aa13.86□□□□□ -0.19
PHF1-201ENST00000374512 HIVEP3Q5T1R4 2406 aa13.86□□□□□ -0.19
PHF1-201ENST00000374512 IGFL4Q6B9Z1 124 aa13.86□□□□□ -0.19
PHF1-201ENST00000374512 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.86□□□□□ -0.19
PHF1-201ENST00000374512 MSRB1Q9NZV6 116 aa13.86□□□□□ -0.19
PHF1-201ENST00000374512 LEPP41159 167 aa13.85□□□□□ -0.19
PHF1-201ENST00000374512 UBE2E1P51965 193 aa13.85□□□□□ -0.19
PHF1-201ENST00000374512 A0A1W2PPR1 153 aa13.84□□□□□ -0.19
PHF1-201ENST00000374512 PRSS47A8MTI9 375 aa13.84□□□□□ -0.19
PHF1-201ENST00000374512 K7ERU9 68 aa13.84□□□□□ -0.19
PHF1-201ENST00000374512 CLEC3BP05452 202 aa13.84□□□□□ -0.19
PHF1-201ENST00000374512 FXYD7P58549 80 aa13.84□□□□□ -0.19
PHF1-201ENST00000374512 Q8N8P6 123 aa13.84□□□□□ -0.19
PHF1-201ENST00000374512 HIGD1BQ9P298 99 aa13.84□□□□□ -0.19
PHF1-201ENST00000374512 WNK2Q9Y3S1 2297 aa13.84□□□□□ -0.19
PHF1-201ENST00000374512 SPTBN1Q01082 2364 aaKnown RBP13.84□□□□□ -0.19
PHF1-201ENST00000374512 ATP5LO75964 103 aa13.84□□□□□ -0.19
PHF1-201ENST00000374512 ERCC8Q13216 396 aa13.84□□□□□ -0.19
PHF1-201ENST00000374512 UFSP1Q6NVU6 142 aa13.84□□□□□ -0.19
PHF1-201ENST00000374512 ATP6V0BQ99437 205 aa13.84□□□□□ -0.19
PHF1-201ENST00000374512 ODF1Q14990 250 aa13.83□□□□□ -0.2
PHF1-201ENST00000374512 SMIM15Q7Z3B0 74 aa13.83□□□□□ -0.2
PHF1-201ENST00000374512 DKK2Q9UBU2 259 aa13.83□□□□□ -0.2
PHF1-201ENST00000374512 TRBV7-1A0A0A6YYK4 115 aa13.83□□□□□ -0.2
PHF1-201ENST00000374512 PRAC2D3DTV9 90 aa13.83□□□□□ -0.2
PHF1-201ENST00000374512 NMUP48645 174 aa13.83□□□□□ -0.2
PHF1-201ENST00000374512 KIR3DS1Q14943 382 aa13.83□□□□□ -0.2
PHF1-201ENST00000374512 HRNRQ86YZ3 2850 aaPredicted RBP13.83□□□□□ -0.2
PHF1-201ENST00000374512 HLA-DRB4P13762 266 aa13.82□□□□□ -0.2
PHF1-201ENST00000374512 UQCRFS1P47985 274 aa13.82□□□□□ -0.2
PHF1-201ENST00000374512 C21orf62-AS1Q17RA5 79 aa13.82□□□□□ -0.2
PHF1-201ENST00000374512 TMEM78Q5T7P6 136 aa13.82□□□□□ -0.2
PHF1-201ENST00000374512 IL17RELQ6ZVW7 336 aa13.82□□□□□ -0.2
PHF1-201ENST00000374512 EEF1AKMT3Q96AZ1 226 aa13.82□□□□□ -0.2
PHF1-201ENST00000374512 HLA-DRB4X5D2U9 266 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms