RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 MT-ATP8P03928 68 aa12.56□□□□□ -0.4
PBX3-204ENST00000373489 IGFL4Q6B9Z1 124 aa12.56□□□□□ -0.4
PBX3-204ENST00000373489 ZNF474Q6S9Z5 364 aaPredicted RBP12.56□□□□□ -0.4
PBX3-204ENST00000373489 MBD3L2Q8NHZ7 208 aaPredicted RBP12.56□□□□□ -0.4
PBX3-204ENST00000373489 GLMPQ8WWB7 406 aa12.56□□□□□ -0.4
PBX3-204ENST00000373489 PKDREJQ9NTG1 2253 aa12.56□□□□□ -0.4
PBX3-204ENST00000373489 MAP1BP46821 2468 aaKnown RBP12.56□□□□□ -0.4
PBX3-204ENST00000373489 TRBV6-1A0A0K0K1D8 114 aa12.56□□□□□ -0.4
PBX3-204ENST00000373489 K7EM74 188 aa12.56□□□□□ -0.4
PBX3-204ENST00000373489 IGKV1-17P01599 117 aa12.56□□□□□ -0.4
PBX3-204ENST00000373489 GLRXP35754 106 aa12.56□□□□□ -0.4
PBX3-204ENST00000373489 IGFL3Q6UXB1 125 aa12.56□□□□□ -0.4
PBX3-204ENST00000373489 TTC9CQ8N5M4 171 aa12.56□□□□□ -0.4
PBX3-204ENST00000373489 MRPL16Q9NX20 251 aaKnown RBP12.56□□□□□ -0.4
PBX3-204ENST00000373489 APC2O95996 2303 aa12.56□□□□□ -0.4
PBX3-204ENST00000373489 CEP295Q9C0D2 2601 aa12.55□□□□□ -0.4
PBX3-204ENST00000373489 NDUFA3O95167 84 aa12.55□□□□□ -0.4
PBX3-204ENST00000373489 RRN3P1Q2M238 152 aa12.55□□□□□ -0.4
PBX3-204ENST00000373489 C8orf86Q6ZUL3 223 aa12.55□□□□□ -0.4
PBX3-204ENST00000373489 PIFOQ8TCI5 191 aa12.55□□□□□ -0.4
PBX3-204ENST00000373489 ZNF48Q96MX3 618 aaPredicted RBP12.55□□□□□ -0.4
PBX3-204ENST00000373489 IL4P05112 153 aa12.55□□□□□ -0.4
PBX3-204ENST00000373489 ZNF80P51504 273 aaPredicted RBP12.55□□□□□ -0.4
PBX3-204ENST00000373489 ZNF502Q8TBZ5 544 aa12.55□□□□□ -0.4
PBX3-204ENST00000373489 SHANK2-AS3Q9BTD1 123 aa12.55□□□□□ -0.4
PBX3-204ENST00000373489 TNFRSF6BO95407 300 aa12.54□□□□□ -0.4
PBX3-204ENST00000373489 RNF185Q96GF1 192 aa12.54□□□□□ -0.4
PBX3-204ENST00000373489 MSRB2Q9Y3D2 182 aa12.54□□□□□ -0.4
PBX3-204ENST00000373489 GATA4P43694 442 aa12.54□□□□□ -0.4
PBX3-204ENST00000373489 FOXI1Q12951 378 aa12.54□□□□□ -0.4
PBX3-204ENST00000373489 ORM1P02763 201 aa12.53□□□□□ -0.4
PBX3-204ENST00000373489 PTH2Q96A98 100 aa12.53□□□□□ -0.4
PBX3-204ENST00000373489 CDIP1Q9H305 208 aa12.53□□□□□ -0.4
PBX3-204ENST00000373489 ACACAQ13085 2346 aa12.53□□□□□ -0.4
PBX3-204ENST00000373489 TMEM30BQ3MIR4 351 aa12.53□□□□□ -0.4
PBX3-204ENST00000373489 FBXL15Q9H469 300 aa12.53□□□□□ -0.4
PBX3-204ENST00000373489 CYSLTR1Q9Y271 337 aa12.53□□□□□ -0.4
PBX3-204ENST00000373489 FAM215AQ9Y5M1 114 aa12.53□□□□□ -0.4
PBX3-204ENST00000373489 FHL3Q13643 280 aa12.52□□□□□ -0.4
PBX3-204ENST00000373489 LYPD2Q6UXB3 125 aa12.52□□□□□ -0.4
PBX3-204ENST00000373489 Q6ZS92 163 aa12.52□□□□□ -0.4
PBX3-204ENST00000373489 NFE4Q86UQ8 179 aa12.52□□□□□ -0.4
PBX3-204ENST00000373489 AAMDCQ9H7C9 122 aa12.52□□□□□ -0.4
PBX3-204ENST00000373489 TACC2O95359 2948 aa12.52□□□□□ -0.4
PBX3-204ENST00000373489 ZNF418Q8TF45 676 aaPredicted RBP12.52□□□□□ -0.41
PBX3-204ENST00000373489 MALRD1Q5VYJ5 2156 aa12.52□□□□□ -0.41
PBX3-204ENST00000373489 IGLV3-9A0A075B6K5 115 aa12.52□□□□□ -0.41
PBX3-204ENST00000373489 H3BRN7 92 aa12.52□□□□□ -0.41
PBX3-204ENST00000373489 RNF183Q96D59 192 aa12.52□□□□□ -0.41
PBX3-204ENST00000373489 SIGLEC9Q9Y336 463 aa12.52□□□□□ -0.41
PBX3-204ENST00000373489 LINC01548A6NM66 108 aa12.51□□□□□ -0.41
PBX3-204ENST00000373489 I3L2K1 104 aa12.51□□□□□ -0.41
PBX3-204ENST00000373489 SMCPP49901 116 aaPredicted RBP12.51□□□□□ -0.41
PBX3-204ENST00000373489 PVRIGQ6DKI7 326 aa12.51□□□□□ -0.41
PBX3-204ENST00000373489 SHISA9B4DS77 424 aa12.51□□□□□ -0.41
PBX3-204ENST00000373489 TEX22C9J3V5 150 aa12.51□□□□□ -0.41
PBX3-204ENST00000373489 XGP55808 180 aa12.51□□□□□ -0.41
PBX3-204ENST00000373489 SRSF1Q07955 248 aaKnown RBP eCLIP12.51□□□□□ -0.41
PBX3-204ENST00000373489 C22orf34Q6ZV56 151 aa12.51□□□□□ -0.41
PBX3-204ENST00000373489 ZNF491Q8N8L2 437 aa12.51□□□□□ -0.41
PBX3-204ENST00000373489 RNF125Q96EQ8 232 aa12.51□□□□□ -0.41
PBX3-204ENST00000373489 PGPEP1Q9NXJ5 209 aa12.51□□□□□ -0.41
PBX3-204ENST00000373489 SS18L2Q9UHA2 77 aa12.51□□□□□ -0.41
PBX3-204ENST00000373489 EFNA4P52798 201 aa12.5□□□□□ -0.41
PBX3-204ENST00000373489 ANKRD11Q6UB99 2663 aaPredicted RBP12.5□□□□□ -0.41
PBX3-204ENST00000373489 ZGRF1Q86YA3 2104 aa12.5□□□□□ -0.41
PBX3-204ENST00000373489 LOC107984156A0A0G2JMH3 177 aa12.5□□□□□ -0.41
PBX3-204ENST00000373489 ATP5LO75964 103 aa12.5□□□□□ -0.41
PBX3-204ENST00000373489 HLA-DMBP28068 263 aa12.5□□□□□ -0.41
PBX3-204ENST00000373489 PLGLAQ15195 96 aa12.5□□□□□ -0.41
PBX3-204ENST00000373489 PPP1R27Q86WC6 154 aa12.5□□□□□ -0.41
PBX3-204ENST00000373489 ARL17AQ8IVW1 177 aa12.5□□□□□ -0.41
PBX3-204ENST00000373489 RPEQ96AT9 228 aa12.5□□□□□ -0.41
PBX3-204ENST00000373489 PRR25Q96S07 402 aa12.5□□□□□ -0.41
PBX3-204ENST00000373489 NXT2Q9NPJ8 142 aaKnown RBP12.5□□□□□ -0.41
PBX3-204ENST00000373489 ATMQ13315 3056 aa12.49□□□□□ -0.41
PBX3-204ENST00000373489 PSMB2P49721 201 aa12.49□□□□□ -0.41
PBX3-204ENST00000373489 MORN3Q6PF18 240 aaPredicted RBP12.49□□□□□ -0.41
PBX3-204ENST00000373489 CCL17Q92583 94 aa12.49□□□□□ -0.41
PBX3-204ENST00000373489 C1QTNF4Q9BXJ3 329 aa12.49□□□□□ -0.41
PBX3-204ENST00000373489 TRAV26-2A0A0B4J265 109 aa12.49□□□□□ -0.41
PBX3-204ENST00000373489 VSTM5A8MXK1 200 aa12.49□□□□□ -0.41
PBX3-204ENST00000373489 MRPS12O15235 138 aaKnown RBP12.49□□□□□ -0.41
PBX3-204ENST00000373489 HOXA3O43365 443 aaPredicted RBP12.49□□□□□ -0.41
PBX3-204ENST00000373489 TEX36Q5VZQ5 186 aa12.49□□□□□ -0.41
PBX3-204ENST00000373489 LYPD1Q8N2G4 141 aa12.49□□□□□ -0.41
PBX3-204ENST00000373489 CTSZQ9UBR2 303 aa12.49□□□□□ -0.41
PBX3-204ENST00000373489 K7ENP7 123 aa12.48□□□□□ -0.41
PBX3-204ENST00000373489 ZNF575Q86XF7 245 aa12.48□□□□□ -0.41
PBX3-204ENST00000373489 MYOZ3Q8TDC0 251 aa12.48□□□□□ -0.41
PBX3-204ENST00000373489 TRBV7-3A0A075B6L6 115 aa12.48□□□□□ -0.41
PBX3-204ENST00000373489 NCBP2LA6PVI3 153 aaKnown RBP12.48□□□□□ -0.41
PBX3-204ENST00000373489 IGLC6P0CF74 106 aa12.48□□□□□ -0.41
PBX3-204ENST00000373489 ZFP2Q6ZN57 461 aa12.48□□□□□ -0.41
PBX3-204ENST00000373489 KLK15Q9H2R5 256 aa12.48□□□□□ -0.41
PBX3-204ENST00000373489 CNIH1O95406 144 aa12.47□□□□□ -0.41
PBX3-204ENST00000373489 FAM27E3Q08E93 113 aa12.47□□□□□ -0.41
PBX3-204ENST00000373489 Q6ZUT4 128 aa12.47□□□□□ -0.41
PBX3-204ENST00000373489 SPTBN4Q9H254 2564 aa12.47□□□□□ -0.41
PBX3-204ENST00000373489 IGHV3OR16-8A0A075B7F1 116 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms