RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 MSRB1Q9NZV6 116 aa12.97□□□□□ -0.33
PCIF1-201ENST00000372409 U3KQK5 164 aa12.97□□□□□ -0.33
PCIF1-201ENST00000372409 CBY3A6NI87 242 aa12.97□□□□□ -0.33
PCIF1-201ENST00000372409 ATP6V0E1O15342 81 aa12.97□□□□□ -0.33
PCIF1-201ENST00000372409 NPYP01303 97 aa12.97□□□□□ -0.33
PCIF1-201ENST00000372409 RPS20P60866 119 aaKnown RBP12.97□□□□□ -0.33
PCIF1-201ENST00000372409 SIRPDQ9H106 197 aa12.97□□□□□ -0.33
PCIF1-201ENST00000372409 A0A1W2PPR1 153 aa12.96□□□□□ -0.33
PCIF1-201ENST00000372409 PRAC2D3DTV9 90 aa12.96□□□□□ -0.33
PCIF1-201ENST00000372409 IGHV3-49A0A0A0MS15 119 aa12.96□□□□□ -0.34
PCIF1-201ENST00000372409 PPIFP30405 207 aaKnown RBP12.96□□□□□ -0.34
PCIF1-201ENST00000372409 CACNG7P62955 275 aa12.96□□□□□ -0.34
PCIF1-201ENST00000372409 HIST1H1AQ02539 215 aaPredicted RBP12.96□□□□□ -0.34
PCIF1-201ENST00000372409 WFDC3Q8IUB2 231 aa12.96□□□□□ -0.34
PCIF1-201ENST00000372409 OR4C5Q8NGB2 326 aa12.96□□□□□ -0.34
PCIF1-201ENST00000372409 UBTD1Q9HAC8 227 aa12.96□□□□□ -0.34
PCIF1-201ENST00000372409 COX8AP10176 69 aa12.95□□□□□ -0.34
PCIF1-201ENST00000372409 CLEC19AQ6UXS0 136 aa12.95□□□□□ -0.34
PCIF1-201ENST00000372409 FBLL1A6NHQ2 334 aaKnown RBP12.95□□□□□ -0.34
PCIF1-201ENST00000372409 G3V318 75 aa12.95□□□□□ -0.34
PCIF1-201ENST00000372409 TAX1BP3O14907 124 aa12.95□□□□□ -0.34
PCIF1-201ENST00000372409 HBDP02042 147 aa12.95□□□□□ -0.34
PCIF1-201ENST00000372409 S100A7P31151 101 aa12.95□□□□□ -0.34
PCIF1-201ENST00000372409 FOXE3Q13461 319 aa12.95□□□□□ -0.34
PCIF1-201ENST00000372409 COX8CQ7Z4L0 72 aa12.95□□□□□ -0.34
PCIF1-201ENST00000372409 FAM110DQ8TAY7 271 aaPredicted RBP12.95□□□□□ -0.34
PCIF1-201ENST00000372409 ZNF502Q8TBZ5 544 aa12.95□□□□□ -0.34
PCIF1-201ENST00000372409 FABP5P3A8MUU1 101 aa12.94□□□□□ -0.34
PCIF1-201ENST00000372409 ZNF207O43670 478 aaKnown RBP12.94□□□□□ -0.34
PCIF1-201ENST00000372409 GOSR1O95249 250 aa12.94□□□□□ -0.34
PCIF1-201ENST00000372409 IGLC6P0CF74 106 aa12.94□□□□□ -0.34
PCIF1-201ENST00000372409 SAA4P35542 130 aa12.94□□□□□ -0.34
PCIF1-201ENST00000372409 ANKRD39Q53RE8 183 aa12.94□□□□□ -0.34
PCIF1-201ENST00000372409 PRSS57Q6UWY2 283 aa12.94□□□□□ -0.34
PCIF1-201ENST00000372409 DTX2Q86UW9 622 aa12.94□□□□□ -0.34
PCIF1-201ENST00000372409 ARL6IP6Q8N6S5 226 aa12.94□□□□□ -0.34
PCIF1-201ENST00000372409 LINC01548A6NM66 108 aa12.93□□□□□ -0.34
PCIF1-201ENST00000372409 IL17RELQ6ZVW7 336 aa12.93□□□□□ -0.34
PCIF1-201ENST00000372409 CRYBG3Q68DQ2 2970 aa12.93□□□□□ -0.34
PCIF1-201ENST00000372409 BUB3O43684 328 aa12.93□□□□□ -0.34
PCIF1-201ENST00000372409 UCNP55089 124 aa12.93□□□□□ -0.34
PCIF1-201ENST00000372409 DEFB125Q8N687 156 aa12.93□□□□□ -0.34
PCIF1-201ENST00000372409 ZFAND3Q9H8U3 227 aa12.93□□□□□ -0.34
PCIF1-201ENST00000372409 IGHV2-70DA0A0C4DH43 119 aa12.92□□□□□ -0.34
PCIF1-201ENST00000372409 PIP4P2Q8N4L2 257 aa12.92□□□□□ -0.34
PCIF1-201ENST00000372409 C18orf15Q96N68 181 aa12.92□□□□□ -0.34
PCIF1-201ENST00000372409 PPP1R14DQ9NXH3 145 aa12.92□□□□□ -0.34
PCIF1-201ENST00000372409 UBE2E1P51965 193 aa12.92□□□□□ -0.34
PCIF1-201ENST00000372409 C2orf91Q6ZV80 131 aa12.92□□□□□ -0.34
PCIF1-201ENST00000372409 IFI27L1Q96BM0 104 aa12.92□□□□□ -0.34
PCIF1-201ENST00000372409 CBY1Q9Y3M2 126 aa12.92□□□□□ -0.34
PCIF1-201ENST00000372409 CELSR2Q9HCU4 2923 aa12.92□□□□□ -0.34
PCIF1-201ENST00000372409 GAS8-AS1O95177 125 aa12.91□□□□□ -0.34
PCIF1-201ENST00000372409 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.91□□□□□ -0.34
PCIF1-201ENST00000372409 ZNF575Q86XF7 245 aa12.91□□□□□ -0.34
PCIF1-201ENST00000372409 UTP20O75691 2785 aaKnown RBP12.91□□□□□ -0.34
PCIF1-201ENST00000372409 EVI2AP22794 236 aa12.91□□□□□ -0.34
PCIF1-201ENST00000372409 LGALS9BQ3B8N2 356 aa12.91□□□□□ -0.34
PCIF1-201ENST00000372409 LGALS9CQ6DKI2 356 aa12.91□□□□□ -0.34
PCIF1-201ENST00000372409 CCDC140Q96MF4 163 aa12.91□□□□□ -0.34
PCIF1-201ENST00000372409 RNASE8Q8TDE3 154 aaKnown RBP12.9□□□□□ -0.34
PCIF1-201ENST00000372409 MAP1LC3AQ9H492 121 aa12.9□□□□□ -0.34
PCIF1-201ENST00000372409 RNF185Q96GF1 192 aa12.9□□□□□ -0.34
PCIF1-201ENST00000372409 BPESC1Q9GZL8 116 aa12.9□□□□□ -0.34
PCIF1-201ENST00000372409 UQCRFS1P47985 274 aa12.9□□□□□ -0.35
PCIF1-201ENST00000372409 RAB9AP51151 201 aa12.9□□□□□ -0.35
PCIF1-201ENST00000372409 AJUBAQ96IF1 538 aa12.9□□□□□ -0.35
PCIF1-201ENST00000372409 AMMECR1LQ6DCA0 310 aa12.89□□□□□ -0.35
PCIF1-201ENST00000372409 CLPSL1A2RUU4 121 aa12.89□□□□□ -0.35
PCIF1-201ENST00000372409 SFTPCP11686 197 aa12.89□□□□□ -0.35
PCIF1-201ENST00000372409 PAX8Q06710 450 aa12.89□□□□□ -0.35
PCIF1-201ENST00000372409 TMEM219Q86XT9 240 aa12.89□□□□□ -0.35
PCIF1-201ENST00000372409 EEF1AKMT3Q96AZ1 226 aa12.89□□□□□ -0.35
PCIF1-201ENST00000372409 SLC50A1Q9BRV3 221 aa12.89□□□□□ -0.35
PCIF1-201ENST00000372409 IGHV3OR16-10A0A075B7F0 116 aa12.88□□□□□ -0.35
PCIF1-201ENST00000372409 GATA1P15976 413 aaPredicted RBP12.88□□□□□ -0.35
PCIF1-201ENST00000372409 AGPAT4-IT1Q9H0P7 198 aa12.88□□□□□ -0.35
PCIF1-201ENST00000372409 LINC00527Q9UJ94 153 aa12.88□□□□□ -0.35
PCIF1-201ENST00000372409 CD5LO43866 347 aa12.88□□□□□ -0.35
PCIF1-201ENST00000372409 NMUP48645 174 aa12.88□□□□□ -0.35
PCIF1-201ENST00000372409 TMEM97Q5BJF2 176 aa12.88□□□□□ -0.35
PCIF1-201ENST00000372409 METTL26Q96S19 204 aa12.88□□□□□ -0.35
PCIF1-201ENST00000372409 TNFRSF6BO95407 300 aa12.87□□□□□ -0.35
PCIF1-201ENST00000372409 FGF6P10767 208 aa12.87□□□□□ -0.35
PCIF1-201ENST00000372409 LEPP41159 167 aa12.87□□□□□ -0.35
PCIF1-201ENST00000372409 EFNA4P52798 201 aa12.87□□□□□ -0.35
PCIF1-201ENST00000372409 LINC01559Q495D7 138 aa12.87□□□□□ -0.35
PCIF1-201ENST00000372409 TMEM78Q5T7P6 136 aa12.87□□□□□ -0.35
PCIF1-201ENST00000372409 DKK2Q9UBU2 259 aa12.87□□□□□ -0.35
PCIF1-201ENST00000372409 SRSF2Q01130 221 aaKnown RBP12.87□□□□□ -0.35
PCIF1-201ENST00000372409 HIVEP3Q5T1R4 2406 aa12.86□□□□□ -0.35
PCIF1-201ENST00000372409 IGKV3D-20A0A0C4DH25 116 aa12.86□□□□□ -0.35
PCIF1-201ENST00000372409 CENPVL3A0A0U1RRI6 287 aa12.86□□□□□ -0.35
PCIF1-201ENST00000372409 NPFFO15130 113 aa12.86□□□□□ -0.35
PCIF1-201ENST00000372409 PPBPP02775 128 aa12.86□□□□□ -0.35
PCIF1-201ENST00000372409 C7orf71A4D174 169 aa12.86□□□□□ -0.35
PCIF1-201ENST00000372409 C8orf86Q6ZUL3 223 aa12.86□□□□□ -0.35
PCIF1-201ENST00000372409 OR1N2Q8NGR9 330 aa12.86□□□□□ -0.35
PCIF1-201ENST00000372409 C11orf21Q9P2W6 132 aa12.86□□□□□ -0.35
PCIF1-201ENST00000372409 RBAKDNA6NC62 111 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms