RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 FNDC4Q9H6D8 234 aaPredicted RBP8.03□□□□□ -1.12
COL5A1-202ENST00000371820 TRAV5A0A0B4J249 113 aa8.02□□□□□ -1.13
COL5A1-202ENST00000371820 IGLC7A0M8Q6 106 aa8.02□□□□□ -1.13
COL5A1-202ENST00000371820 CGB1A6NKQ9 187 aa8.02□□□□□ -1.13
COL5A1-202ENST00000371820 NDUFA3O95167 84 aa8.02□□□□□ -1.13
COL5A1-202ENST00000371820 IGHG4P01861 327 aa8.02□□□□□ -1.13
COL5A1-202ENST00000371820 IGLL1P15814 213 aa8.02□□□□□ -1.13
COL5A1-202ENST00000371820 BTF3P20290 206 aaKnown RBP8.02□□□□□ -1.13
COL5A1-202ENST00000371820 RIGQ13278 110 aa8.02□□□□□ -1.13
COL5A1-202ENST00000371820 PSMG4Q5JS54 123 aa8.02□□□□□ -1.13
COL5A1-202ENST00000371820 MRPL54Q6P161 138 aaKnown RBP8.02□□□□□ -1.13
COL5A1-202ENST00000371820 RBPMS2Q6ZRY4 209 aaKnown RBP8.02□□□□□ -1.13
COL5A1-202ENST00000371820 C8orf86Q6ZUL3 223 aa8.02□□□□□ -1.13
COL5A1-202ENST00000371820 LINC00482Q8N8I6 264 aa8.02□□□□□ -1.13
COL5A1-202ENST00000371820 RNF152Q8N8N0 203 aa8.02□□□□□ -1.13
COL5A1-202ENST00000371820 OR1B1Q8NGR6 318 aa8.02□□□□□ -1.13
COL5A1-202ENST00000371820 THYN1Q9P016 225 aa8.02□□□□□ -1.13
COL5A1-202ENST00000371820 LINC01548A6NM66 108 aa8.01□□□□□ -1.13
COL5A1-202ENST00000371820 ATP6V0E1O15342 81 aa8.01□□□□□ -1.13
COL5A1-202ENST00000371820 LTAP01374 205 aa8.01□□□□□ -1.13
COL5A1-202ENST00000371820 TCRAP04437 139 aa8.01□□□□□ -1.13
COL5A1-202ENST00000371820 CFHR3Q02985 330 aa8.01□□□□□ -1.13
COL5A1-202ENST00000371820 FXYD3Q14802 87 aa8.01□□□□□ -1.13
COL5A1-202ENST00000371820 C18orf32Q8TCD1 76 aa8.01□□□□□ -1.13
COL5A1-202ENST00000371820 ALKBH7Q9BT30 221 aaPredicted RBP8.01□□□□□ -1.13
COL5A1-202ENST00000371820 SNHG12Q9BXW3 62 aa8.01□□□□□ -1.13
COL5A1-202ENST00000371820 MRPS16Q9Y3D3 137 aaKnown RBP8.01□□□□□ -1.13
COL5A1-202ENST00000371820 KMT2CQ8NEZ4 4911 aaKnown RBP8.01□□□□□ -1.13
COL5A1-202ENST00000371820 IGHV7-81A0A0B4J1V7 117 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 TRAV41A0A0B4J266 112 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 A0A1B0GXF2 115 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 C19orf71A6NCJ1 209 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 HIGD1CA8MV81 97 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 M0R2Z0 102 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 CCL24O00175 119 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 CHEK1O14757 476 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 PYYP10082 97 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 CNTFRP26992 372 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 PSMB8P28062 276 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 PDE6HQ13956 83 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 SPATA45Q537H7 98 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 TMEM75Q8N9X5 138 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 C4orf3Q8WVX3 66 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 FAM103A1Q9BTL3 118 aaKnown RBP8□□□□□ -1.13
COL5A1-202ENST00000371820 Q9H3A6 140 aa8□□□□□ -1.13
COL5A1-202ENST00000371820 TRAV9-2A0A087WT02 112 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 E7EUB6 86 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 NPIPB6E9PJ23 425 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 CNIH1O95406 144 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 LINC00614P0C842 121 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 C3orf79P0CE67 100 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 PPIFP30405 207 aaKnown RBP7.99□□□□□ -1.13
COL5A1-202ENST00000371820 CSN1S1P47710 185 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 RAB9AP51151 201 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 CRIP2P52943 208 aaPredicted RBP7.99□□□□□ -1.13
COL5A1-202ENST00000371820 TCL1AP56279 114 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 LINC00310P59036 64 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 RPS20P60866 119 aaKnown RBP7.99□□□□□ -1.13
COL5A1-202ENST00000371820 PSG9Q00887 426 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 LCNL1Q6ZST4 164 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 UBE2E2Q96LR5 201 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 TXN2Q99757 166 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 FBXL15Q9H469 300 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 FBXL7Q9UJT9 491 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 HSPB8Q9UJY1 196 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 PAM16Q9Y3D7 125 aa7.99□□□□□ -1.13
COL5A1-202ENST00000371820 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.98□□□□□ -1.13
COL5A1-202ENST00000371820 HSBP1L1C9JCN9 74 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 K7EIL1 84 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 SPINK4O60575 86 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 IGLV1-40P01703 118 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 IGLC1P0CG04 106 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 GP9P14770 177 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 CTRLP40313 264 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 MFAP4P55083 255 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 ZNF124Q15973 351 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 ECSCRQ19T08 205 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 KIAA1644Q3SXP7 199 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 SAPCD1Q5SSQ6 148 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 C9orf66Q5T8R8 295 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 C18orf65Q6ZTR6 163 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 NIT1Q86X76 327 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 GATD1Q8NB37 220 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 OR2D3Q8NGH3 330 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 BLNKQ8WV28 456 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 SRSF12Q8WXF0 261 aaKnown RBP7.98□□□□□ -1.13
COL5A1-202ENST00000371820 RITA1Q96K30 269 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 PMCHL2Q9BQD1 86 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 TMEM70Q9BUB7 260 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 SLC25A39Q9BZJ4 359 aaPredicted RBP7.98□□□□□ -1.13
COL5A1-202ENST00000371820 TMEM191AQ9H0A3 160 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 MS4A6AQ9H2W1 248 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 AAMDCQ9H7C9 122 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 PPP1R14DQ9NXH3 145 aa7.98□□□□□ -1.13
COL5A1-202ENST00000371820 DNAH9Q9NYC9 4486 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 NBEAL2Q6ZNJ1 2754 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 G3V318 75 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 I3L2K1 104 aa7.97□□□□□ -1.13
COL5A1-202ENST00000371820 CRXO43186 299 aaPredicted RBP7.97□□□□□ -1.13
COL5A1-202ENST00000371820 SNRPCP09234 159 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms