RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 FAM90A9PA6NNJ1 464 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 K7EN84 100 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 PRTN3P24158 256 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 COTL1Q14019 142 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 TMEM95Q3KNT9 176 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 OR10J3Q5JRS4 329 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 Q6ZWC4 215 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 Q8TCH9 128 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 MRPL36Q9P0J6 103 aaKnown RBP7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 TRGV2A0A075B6R0 118 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 TTC9CQ8N5M4 171 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 SPCS1Q9Y6A9 102 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 DSCAMO60469 2012 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 PROP1O75360 226 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 OR13C6PQ8NH95 151 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 C18orf32Q8TCD1 76 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 RHPN1-AS1Q9BWJ2 59 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 SLC25A2Q9BXI2 301 aa7.26□□□□□ -1.25
SMARCA1-202ENST00000371122 TRAV12-2A0A075B6T6 113 aa7.25□□□□□ -1.25
SMARCA1-202ENST00000371122 UBE2L6O14933 153 aa7.25□□□□□ -1.25
SMARCA1-202ENST00000371122 CRIP3Q6Q6R5 217 aa7.25□□□□□ -1.25
SMARCA1-202ENST00000371122 A0A1B0GWB2 263 aa7.25□□□□□ -1.25
SMARCA1-202ENST00000371122 SMIM13P0DJ93 91 aa7.25□□□□□ -1.25
SMARCA1-202ENST00000371122 C1orf194Q5T5A4 169 aa7.25□□□□□ -1.25
SMARCA1-202ENST00000371122 ADAMTS20P59510 1910 aa7.25□□□□□ -1.25
SMARCA1-202ENST00000371122 PPP1R17O96001 155 aa7.25□□□□□ -1.25
SMARCA1-202ENST00000371122 IGHV2-5P01817 119 aa7.25□□□□□ -1.25
SMARCA1-202ENST00000371122 SNHG12Q9BXW3 62 aa7.25□□□□□ -1.25
SMARCA1-202ENST00000371122 CYSLTR1Q9Y271 337 aa7.25□□□□□ -1.25
SMARCA1-202ENST00000371122 IGKV1OR2-108A0A075B7D4 117 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 TMEM8BA6NDV4 472 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 PSG3Q16557 428 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 ZC2HC1BQ5TFG8 222 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 TEX36Q5VZQ5 186 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 PIP4P1Q86T03 277 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 Q86TA4 180 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 PHLDA1Q8WV24 401 aaPredicted RBP7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 TMEM158Q8WZ71 300 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 VGLL1Q99990 258 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 V9GYV3 84 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 PIP4P2Q8N4L2 257 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 TNFRSF14Q92956 283 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 MGAQ8IWI9 3026 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 HCFC1P51610 2035 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 IGLV2-14P01704 120 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 ZNF562Q6V9R5 426 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 C11orf68Q9H3H3 251 aaKnown RBP7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 MOB4Q9Y3A3 225 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 MSRB2Q9Y3D2 182 aa7.24□□□□□ -1.25
SMARCA1-202ENST00000371122 IGHV3-16A0A0C4DH30 117 aa7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 ZNF876PQ49A33 203 aa7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 Q8NFD4 153 aa7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 ZNF625Q96I27 306 aaPredicted RBP7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 ALKBH7Q9BT30 221 aaPredicted RBP7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 TRAV2A0A0B4J234 112 aa7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 TRAV21A0A0B4J279 112 aa7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 SYS1-DBNDD2H3BUS1 97 aa7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 RPL35AP18077 110 aaKnown RBP7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 GATA4P43694 442 aa7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 SPINK13Q1W4C9 94 aa7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 C10orf91Q5T1B1 145 aa7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 PEF1Q9UBV8 284 aaKnown RBP7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 KLK9Q9UKQ9 250 aa7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 GATA1P15976 413 aaPredicted RBP7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 SLC50A1Q9BRV3 221 aa7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 SHANK2-AS3Q9BTD1 123 aa7.23□□□□□ -1.25
SMARCA1-202ENST00000371122 TRAV9-1A0A075B6T8 112 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 A8MWP6 167 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 SHISA9B4DS77 424 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 ATP5LO75964 103 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 ZNF833PQ6ZTB9 187 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 SPRY4Q9C004 299 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 IGLC1P0CG04 106 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 PRSS22Q9GZN4 317 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 ZNF815PA8K554 130 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 PRR20EP86478 221 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 PRR20CP86479 221 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 PRR20DP86480 221 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 PRR20BP86481 221 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 PRR20AP86496 221 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 CFHR3Q02985 330 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 IGFL3Q6UXB1 125 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 BCL6BQ8N143 479 aaPredicted RBP7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 ZC2HC1AQ96GY0 325 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 ST20Q9HBF5 79 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 K7EMI3 77 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 TOMM40O96008 361 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 C1orf229Q6ZS94 237 aaPredicted RBP7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 LINC00173Q6ZV60 143 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 VCX2Q9H322 139 aa7.22□□□□□ -1.25
SMARCA1-202ENST00000371122 KALRNO60229 2985 aa7.21□□□□□ -1.25
SMARCA1-202ENST00000371122 NUP210LQ5VU65 1888 aa7.21□□□□□ -1.25
SMARCA1-202ENST00000371122 TRBV19A0A075B6N1 114 aa7.21□□□□□ -1.25
SMARCA1-202ENST00000371122 IGLC7A0M8Q6 106 aa7.21□□□□□ -1.25
SMARCA1-202ENST00000371122 Q6AWC8 147 aa7.21□□□□□ -1.25
SMARCA1-202ENST00000371122 FXYD5Q96DB9 178 aa7.21□□□□□ -1.25
SMARCA1-202ENST00000371122 MSRB1Q9NZV6 116 aa7.21□□□□□ -1.25
SMARCA1-202ENST00000371122 TMEM238LA0A1B0GVL6 79 aa7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 A6NJY4 79 aa7.21□□□□□ -1.26
SMARCA1-202ENST00000371122 BRWD1-AS2P59051 145 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms