RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 LYZP61626 148 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 USF2Q15853 346 aaPredicted RBP2.69□□□□□ -1.98
MCF2-202ENST00000370573 FAM74A3Q4VXF1 159 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 C10orf113Q5VZT2 155 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 OR1B1Q8NGR6 318 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 OR4F5Q8NH21 305 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 Q8WTZ3 238 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 GATAD1Q8WUU5 269 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 FAM167A-AS1Q96KT0 104 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 NDUFAF3Q9BU61 184 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 SCRT1Q9BWW7 348 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 ACTR3CQ9C0K3 210 aaPredicted RBP2.69□□□□□ -1.98
MCF2-202ENST00000370573 KCNIP2Q9NS61 270 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 FUT9Q9Y231 359 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 GOLT1BQ9Y3E0 138 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 VWFP04275 2813 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 TRAV1-1A0A0B4J248 108 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 CTXND1A0A1B0GTU2 59 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 MAP1LC3B2A6NCE7 125 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 ZNF207O43670 478 aaKnown RBP2.68□□□□□ -1.98
MCF2-202ENST00000370573 IL4P05112 153 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 STAG3L2P0CL84 134 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 STAG3L3P0CL85 134 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 CDC34P49427 236 aaPredicted RBP2.68□□□□□ -1.98
MCF2-202ENST00000370573 RHOBP62745 196 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 DEFB136Q30KP8 78 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 FAM78BQ5VT40 261 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 LEMD1Q68G75 181 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 UNQ9165/PRO28630Q6UXU0 137 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 IL34Q6ZMJ4 242 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 LINC00305Q7Z4B0 112 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 OR2D3Q8NGH3 330 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 OR1L4Q8NGR5 311 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 DUX3Q96PT4 197 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 PBDC1Q9BVG4 233 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 SLC25A2Q9BXI2 301 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 SLC25A39Q9BZJ4 359 aaPredicted RBP2.68□□□□□ -1.98
MCF2-202ENST00000370573 MAP1LC3BQ9GZQ8 125 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 HIGD1AQ9Y241 93 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 IGLV5-52A0A0A0MRZ9 124 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 A0A1W2PPV4 95 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 SNURFLB1AK76 121 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 H3BRN7 92 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 NDUFA4O00483 81 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 CHEK1O14757 476 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 DLEU1O43261 78 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 HSPB1P04792 205 aaKnown RBP2.68□□□□□ -1.98
MCF2-202ENST00000370573 C8orf88P0DMB2 117 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 RPL24P83731 157 aaKnown RBP2.68□□□□□ -1.98
MCF2-202ENST00000370573 KRTAP24-1Q3LI83 254 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 GPHB5Q86YW7 130 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 PRR26Q8N8Z3 221 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 OR1N2Q8NGR9 330 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 C4orf3Q8WVX3 66 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 C17orf77Q96MU5 243 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 SHANK2-AS3Q9BTD1 123 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 C19orf24Q9BVV8 132 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 WNK1Q9H4A3 2382 aa2.68□□□□□ -1.98
MCF2-202ENST00000370573 IGHV3OR16-13A0A075B7E8 117 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 IGHV3-49A0A0A0MS15 119 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 IGHV3-74A0A0B4J1X5 117 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 IGHV3-66A0A0C4DH42 116 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 C9JQL5 133 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 MRPS12O15235 138 aaKnown RBP2.67□□□□□ -1.98
MCF2-202ENST00000370573 GAGE7O76087 117 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 SNRPCP09234 159 aaKnown RBP2.67□□□□□ -1.98
MCF2-202ENST00000370573 GAGE12FP0CL80 117 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 GAGE12GP0CL81 117 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 GAGE12IP0CL82 117 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 ARL14EPLP0DKL9 152 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 PYYP10082 97 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 GCHFRP30047 84 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 HOXD3P31249 432 aaPredicted RBP2.67□□□□□ -1.98
MCF2-202ENST00000370573 RPS20P60866 119 aaKnown RBP2.67□□□□□ -1.98
MCF2-202ENST00000370573 FABP9Q0Z7S8 132 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 GAGE4Q13068 117 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 KLF5Q13887 457 aaPredicted RBP2.67□□□□□ -1.98
MCF2-202ENST00000370573 KLHL30-AS1Q8NEE0 82 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 RXFP4Q8TDU9 374 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 TMEM190Q8WZ59 177 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 FXYD5Q96DB9 178 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 RNF2Q99496 336 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 RARRES2Q99969 163 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 C20orf24Q9BUV8 137 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 MRPL32Q9BYC8 188 aaKnown RBP2.67□□□□□ -1.98
MCF2-202ENST00000370573 SMAD5-AS1Q9Y6J3 95 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 STAB1Q9NY15 2570 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 COL6A5A8TX70 2615 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 A0A1B0GUS0 222 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 COLCA2A8K830 154 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 LINC01619G3V211 115 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 H3BQ15 152 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 H3BTX0 84 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 BUB3O43684 328 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 PPBPP02775 128 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 OR10J4P0C629 311 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 GP9P14770 177 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 NPPCP23582 126 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 CRYBB3P26998 211 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 SYNJ2BPP57105 145 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms