RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 PMS2CLQ68D20 193 aa10.25□□□□□ -0.77
NCSTN-202ENST00000368063 TMEM167AQ8TBQ9 72 aa10.25□□□□□ -0.77
NCSTN-202ENST00000368063 DNAJC30Q96LL9 226 aa10.25□□□□□ -0.77
NCSTN-202ENST00000368063 MSRB1Q9NZV6 116 aa10.25□□□□□ -0.77
NCSTN-202ENST00000368063 FRYLO94915 3013 aa10.25□□□□□ -0.77
NCSTN-202ENST00000368063 GATA1P15976 413 aaPredicted RBP10.25□□□□□ -0.77
NCSTN-202ENST00000368063 C3orf56Q8N813 242 aa10.25□□□□□ -0.77
NCSTN-202ENST00000368063 C15orf53Q8NAA6 179 aa10.25□□□□□ -0.77
NCSTN-202ENST00000368063 MYOZ3Q8TDC0 251 aa10.25□□□□□ -0.77
NCSTN-202ENST00000368063 PLEKHB2Q96CS7 222 aa10.25□□□□□ -0.77
NCSTN-202ENST00000368063 AAMDCQ9H7C9 122 aa10.25□□□□□ -0.77
NCSTN-202ENST00000368063 FREM2Q5SZK8 3169 aa10.24□□□□□ -0.77
NCSTN-202ENST00000368063 PVRIGQ6DKI7 326 aa10.24□□□□□ -0.77
NCSTN-202ENST00000368063 SAP25Q8TEE9 199 aa10.24□□□□□ -0.77
NCSTN-202ENST00000368063 F8VRH5 84 aa10.24□□□□□ -0.77
NCSTN-202ENST00000368063 C6orf15Q6UXA7 325 aaPredicted RBP10.24□□□□□ -0.77
NCSTN-202ENST00000368063 ZNF575Q86XF7 245 aa10.24□□□□□ -0.77
NCSTN-202ENST00000368063 CRIP2P52943 208 aaPredicted RBP10.23□□□□□ -0.77
NCSTN-202ENST00000368063 Q8N1Y9 231 aa10.23□□□□□ -0.77
NCSTN-202ENST00000368063 PSMG3-AS1Q96PY0 264 aa10.23□□□□□ -0.77
NCSTN-202ENST00000368063 TRAV12-1A0A0B4J245 112 aa10.23□□□□□ -0.77
NCSTN-202ENST00000368063 H7C1H1 209 aa10.23□□□□□ -0.77
NCSTN-202ENST00000368063 TIMM8AO60220 97 aaPredicted RBP10.23□□□□□ -0.77
NCSTN-202ENST00000368063 LYZP61626 148 aa10.23□□□□□ -0.77
NCSTN-202ENST00000368063 Q0VFX4 171 aa10.23□□□□□ -0.77
NCSTN-202ENST00000368063 MRPL20Q9BYC9 149 aaKnown RBP10.23□□□□□ -0.77
NCSTN-202ENST00000368063 CTSZQ9UBR2 303 aa10.23□□□□□ -0.77
NCSTN-202ENST00000368063 LY6G6EA0A0G2JKS1 128 aa10.23□□□□□ -0.77
NCSTN-202ENST00000368063 EGR2P11161 476 aaPredicted RBP10.23□□□□□ -0.77
NCSTN-202ENST00000368063 C21orf62Q9NYP8 219 aa10.23□□□□□ -0.77
NCSTN-202ENST00000368063 U3KQA8 63 aa10.23□□□□□ -0.77
NCSTN-202ENST00000368063 ARFGEF3Q5TH69 2177 aa10.22□□□□□ -0.77
NCSTN-202ENST00000368063 INTS1Q8N201 2190 aaKnown RBP10.22□□□□□ -0.77
NCSTN-202ENST00000368063 C9JAW5 83 aa10.22□□□□□ -0.77
NCSTN-202ENST00000368063 M0R3E3 92 aa10.22□□□□□ -0.77
NCSTN-202ENST00000368063 COX6B1P14854 86 aa10.22□□□□□ -0.77
NCSTN-202ENST00000368063 ZNF833PQ6ZTB9 187 aa10.22□□□□□ -0.77
NCSTN-202ENST00000368063 CNFNQ9BYD5 112 aa10.22□□□□□ -0.77
NCSTN-202ENST00000368063 GUSBP11Q6P575 273 aa10.22□□□□□ -0.77
NCSTN-202ENST00000368063 OR4C13Q8NGP0 309 aa10.22□□□□□ -0.77
NCSTN-202ENST00000368063 PRADC1Q9BSG0 188 aa10.22□□□□□ -0.77
NCSTN-202ENST00000368063 NGBQ9NPG2 151 aa10.22□□□□□ -0.77
NCSTN-202ENST00000368063 IGHV3-21A0A0B4J1V1 117 aa10.21□□□□□ -0.77
NCSTN-202ENST00000368063 ZNF815PA8K554 130 aa10.21□□□□□ -0.77
NCSTN-202ENST00000368063 K7EM74 188 aa10.21□□□□□ -0.77
NCSTN-202ENST00000368063 LINC00694P0DN24 101 aa10.21□□□□□ -0.77
NCSTN-202ENST00000368063 EFNA4P52798 201 aa10.21□□□□□ -0.77
NCSTN-202ENST00000368063 SRSF9Q13242 221 aaKnown RBP eCLIP10.21□□□□□ -0.77
NCSTN-202ENST00000368063 COX8CQ7Z4L0 72 aa10.21□□□□□ -0.77
NCSTN-202ENST00000368063 LYPD1Q8N2G4 141 aa10.21□□□□□ -0.77
NCSTN-202ENST00000368063 C10orf126Q8N4M7 172 aa10.21□□□□□ -0.77
NCSTN-202ENST00000368063 NTN5Q8WTR8 489 aaPredicted RBP10.21□□□□□ -0.77
NCSTN-202ENST00000368063 ONECUT1Q9UBC0 465 aa10.21□□□□□ -0.77
NCSTN-202ENST00000368063 RPUSD1Q9UJJ7 312 aaKnown RBP10.21□□□□□ -0.77
NCSTN-202ENST00000368063 WIPF1O43516 503 aa10.21□□□□□ -0.78
NCSTN-202ENST00000368063 CFC1BP0CG36 223 aa10.21□□□□□ -0.78
NCSTN-202ENST00000368063 CFC1P0CG37 223 aa10.21□□□□□ -0.78
NCSTN-202ENST00000368063 PF4V1P10720 104 aa10.21□□□□□ -0.78
NCSTN-202ENST00000368063 LAGE3Q14657 143 aa10.21□□□□□ -0.78
NCSTN-202ENST00000368063 HCP5Q6MZN7 132 aa10.21□□□□□ -0.78
NCSTN-202ENST00000368063 FAM57AQ8TBR7 257 aa10.21□□□□□ -0.78
NCSTN-202ENST00000368063 TRIOO75962 3097 aa10.21□□□□□ -0.78
NCSTN-202ENST00000368063 TRAV8-4A0A0B4J246 113 aa10.2□□□□□ -0.78
NCSTN-202ENST00000368063 SMIM9A6NGZ8 99 aa10.2□□□□□ -0.78
NCSTN-202ENST00000368063 LY6DQ14210 128 aa10.2□□□□□ -0.78
NCSTN-202ENST00000368063 IL11RAQ14626 422 aa10.2□□□□□ -0.78
NCSTN-202ENST00000368063 CHCHD5Q9BSY4 110 aa10.2□□□□□ -0.78
NCSTN-202ENST00000368063 PRR25Q96S07 402 aa10.2□□□□□ -0.78
NCSTN-202ENST00000368063 RPL13AP40429 203 aaKnown RBP10.2□□□□□ -0.78
NCSTN-202ENST00000368063 SCGB1D4Q6XE38 83 aa10.2□□□□□ -0.78
NCSTN-202ENST00000368063 LINC01600Q96MT4 127 aa10.2□□□□□ -0.78
NCSTN-202ENST00000368063 DUSP14O95147 198 aaKnown RBP10.19□□□□□ -0.78
NCSTN-202ENST00000368063 IGLV2-23P01705 113 aa10.19□□□□□ -0.78
NCSTN-202ENST00000368063 DUX4L9Q6RFH8 374 aaPredicted RBP10.19□□□□□ -0.78
NCSTN-202ENST00000368063 TRPT1Q86TN4 253 aaKnown RBP10.19□□□□□ -0.78
NCSTN-202ENST00000368063 LINC00574Q9H8X3 128 aa10.19□□□□□ -0.78
NCSTN-202ENST00000368063 CEACAM4O75871 244 aa10.19□□□□□ -0.78
NCSTN-202ENST00000368063 CD40P25942 277 aa10.19□□□□□ -0.78
NCSTN-202ENST00000368063 FOXC1Q12948 553 aa10.19□□□□□ -0.78
NCSTN-202ENST00000368063 MRPL23Q16540 153 aaKnown RBP10.19□□□□□ -0.78
NCSTN-202ENST00000368063 MRGPRG-AS1Q2M3A8 158 aa10.19□□□□□ -0.78
NCSTN-202ENST00000368063 BAALCQ8WXS3 180 aa10.19□□□□□ -0.78
NCSTN-202ENST00000368063 SCNM1Q9BWG6 230 aa10.19□□□□□ -0.78
NCSTN-202ENST00000368063 DSCAMO60469 2012 aa10.19□□□□□ -0.78
NCSTN-202ENST00000368063 FAM186AA6NE01 2351 aa10.18□□□□□ -0.78
NCSTN-202ENST00000368063 TRAV25A0A0B4J276 109 aa10.18□□□□□ -0.78
NCSTN-202ENST00000368063 MRPS12O15235 138 aaKnown RBP10.18□□□□□ -0.78
NCSTN-202ENST00000368063 ZNF80P51504 273 aaPredicted RBP10.18□□□□□ -0.78
NCSTN-202ENST00000368063 SPINK14Q6IE38 97 aa10.18□□□□□ -0.78
NCSTN-202ENST00000368063 TPSG1Q9NRR2 321 aa10.18□□□□□ -0.78
NCSTN-202ENST00000368063 LOC107984640A0A0U1RRK4 108 aa10.18□□□□□ -0.78
NCSTN-202ENST00000368063 DTX2Q86UW9 622 aa10.18□□□□□ -0.78
NCSTN-202ENST00000368063 SHANK2-AS3Q9BTD1 123 aa10.18□□□□□ -0.78
NCSTN-202ENST00000368063 PRUNE2Q8WUY3 3088 aa10.18□□□□□ -0.78
NCSTN-202ENST00000368063 DNAJC13O75165 2243 aa10.18□□□□□ -0.78
NCSTN-202ENST00000368063 TRAV2A0A0B4J234 112 aa10.17□□□□□ -0.78
NCSTN-202ENST00000368063 SLC25A16P16260 332 aa10.17□□□□□ -0.78
NCSTN-202ENST00000368063 PRR14LQ5THK1 2151 aa10.17□□□□□ -0.78
NCSTN-202ENST00000368063 NRACQ8N912 160 aa10.17□□□□□ -0.78
NCSTN-202ENST00000368063 CACNA1EQ15878 2313 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms