RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 CSN1S1P47710 185 aa17■□□□□ 0.31
PFDN2-201ENST00000368010 CCDC28AQ8IWP9 274 aa17■□□□□ 0.31
PFDN2-201ENST00000368010 PSMG3Q9BT73 122 aaPredicted RBP17■□□□□ 0.31
PFDN2-201ENST00000368010 TRAV12-3A0A0B4J271 114 aa16.99■□□□□ 0.31
PFDN2-201ENST00000368010 EIF3GO75821 320 aaKnown RBP eCLIP16.99■□□□□ 0.31
PFDN2-201ENST00000368010 TMEM78Q5T7P6 136 aa16.99■□□□□ 0.31
PFDN2-201ENST00000368010 OR10G4Q8NGN3 311 aa16.99■□□□□ 0.31
PFDN2-201ENST00000368010 OR10G9Q8NGN4 311 aa16.99■□□□□ 0.31
PFDN2-201ENST00000368010 OR10G7Q8NGN6 311 aa16.99■□□□□ 0.31
PFDN2-201ENST00000368010 OR2G3Q8NGZ4 309 aa16.99■□□□□ 0.31
PFDN2-201ENST00000368010 RNASE8Q8TDE3 154 aaKnown RBP16.99■□□□□ 0.31
PFDN2-201ENST00000368010 FAM210BQ96KR6 192 aa16.99■□□□□ 0.31
PFDN2-201ENST00000368010 FAM19A4Q96LR4 140 aa16.99■□□□□ 0.31
PFDN2-201ENST00000368010 Q9H3A6 140 aa16.99■□□□□ 0.31
PFDN2-201ENST00000368010 RNF222A6NCQ9 220 aa16.98■□□□□ 0.31
PFDN2-201ENST00000368010 PQLC2Q6ZP29 291 aa16.98■□□□□ 0.31
PFDN2-201ENST00000368010 TNFSF18Q9UNG2 199 aa16.98■□□□□ 0.31
PFDN2-201ENST00000368010 TIMM8BQ9Y5J9 83 aaPredicted RBP16.98■□□□□ 0.31
PFDN2-201ENST00000368010 C7orf71A4D174 169 aa16.97■□□□□ 0.31
PFDN2-201ENST00000368010 KLLNB2CW77 178 aa16.97■□□□□ 0.31
PFDN2-201ENST00000368010 DEFB130BP0DP73 79 aa16.97■□□□□ 0.31
PFDN2-201ENST00000368010 DEFB130AP0DP74 79 aa16.97■□□□□ 0.31
PFDN2-201ENST00000368010 ATP6V0CP27449 155 aa16.97■□□□□ 0.31
PFDN2-201ENST00000368010 VGLL1Q99990 258 aa16.97■□□□□ 0.31
PFDN2-201ENST00000368010 PYGO2Q9BRQ0 406 aa16.97■□□□□ 0.31
PFDN2-201ENST00000368010 NMBP08949 121 aa16.96■□□□□ 0.31
PFDN2-201ENST00000368010 CRISP2P16562 243 aa16.96■□□□□ 0.31
PFDN2-201ENST00000368010 CDC34P49427 236 aaPredicted RBP16.95■□□□□ 0.3
PFDN2-201ENST00000368010 SERF2P84101 59 aa16.95■□□□□ 0.3
PFDN2-201ENST00000368010 RXFP4Q8TDU9 374 aa16.95■□□□□ 0.3
PFDN2-201ENST00000368010 ZNF492Q9P255 531 aa16.95■□□□□ 0.3
PFDN2-201ENST00000368010 BORCS7-ASMTA0A0B4J1R7 106 aa16.94■□□□□ 0.3
PFDN2-201ENST00000368010 RBAKDNA6NC62 111 aa16.94■□□□□ 0.3
PFDN2-201ENST00000368010 HMGB3O15347 200 aaKnown RBP16.94■□□□□ 0.3
PFDN2-201ENST00000368010 MBP02144 154 aa16.94■□□□□ 0.3
PFDN2-201ENST00000368010 GPX1P07203 203 aa16.94■□□□□ 0.3
PFDN2-201ENST00000368010 ZNF138P52744 262 aa16.94■□□□□ 0.3
PFDN2-201ENST00000368010 BTN1A1Q13410 526 aa16.94■□□□□ 0.3
PFDN2-201ENST00000368010 FAM74A1Q5RGS3 127 aa16.94■□□□□ 0.3
PFDN2-201ENST00000368010 NOP10Q9NPE3 64 aaKnown RBP16.94■□□□□ 0.3
PFDN2-201ENST00000368010 OTORQ9NRC9 128 aa16.94■□□□□ 0.3
PFDN2-201ENST00000368010 G3V3Q6 166 aa16.93■□□□□ 0.3
PFDN2-201ENST00000368010 RNASE4P34096 147 aaKnown RBP16.93■□□□□ 0.3
PFDN2-201ENST00000368010 CD300CQ08708 224 aa16.93■□□□□ 0.3
PFDN2-201ENST00000368010 RPL7L1Q6DKI1 246 aaKnown RBP16.93■□□□□ 0.3
PFDN2-201ENST00000368010 ZFAND2AQ8N6M9 145 aa16.93■□□□□ 0.3
PFDN2-201ENST00000368010 Q8TAT8 98 aa16.93■□□□□ 0.3
PFDN2-201ENST00000368010 CMTM2Q8TAZ6 248 aa16.93■□□□□ 0.3
PFDN2-201ENST00000368010 GNPNAT1Q96EK6 184 aaPredicted RBP16.93■□□□□ 0.3
PFDN2-201ENST00000368010 SH3BGRL3Q9H299 93 aa16.93■□□□□ 0.3
PFDN2-201ENST00000368010 TRBV7-9A0A0J9YWB2 115 aa16.92■□□□□ 0.3
PFDN2-201ENST00000368010 SNURFLB1AK76 121 aa16.92■□□□□ 0.3
PFDN2-201ENST00000368010 HYLS1Q96M11 299 aa16.92■□□□□ 0.3
PFDN2-201ENST00000368010 VPS13DQ5THJ4 4388 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 PGPA6NDG6 321 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 CBY3A6NI87 242 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 DIRC3C9JPN6 131 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 ATP5G1P05496 136 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 STAG3L2P0CL84 134 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 STAG3L3P0CL85 134 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 ARL14EPLP0DKL9 152 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 P0DMU3 169 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 FAM231AP0DMU4 169 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 FAM231CP0DMU5 169 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 ATP5G3P48201 142 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 TMEM88Q6PEY1 159 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 RAB24Q969Q5 203 aa16.91■□□□□ 0.3
PFDN2-201ENST00000368010 ARPC5O15511 151 aa16.9■□□□□ 0.3
PFDN2-201ENST00000368010 ZNF324O75467 553 aaPredicted RBP16.9■□□□□ 0.3
PFDN2-201ENST00000368010 ZNF680Q8NEM1 530 aa16.9■□□□□ 0.3
PFDN2-201ENST00000368010 LINC00467Q9BRT7 94 aa16.9■□□□□ 0.3
PFDN2-201ENST00000368010 PRR9Q5T870 116 aa16.89■□□□□ 0.29
PFDN2-201ENST00000368010 EIF4E3Q8N5X7 224 aaKnown RBP16.89■□□□□ 0.29
PFDN2-201ENST00000368010 ACTR3CQ9C0K3 210 aaPredicted RBP16.89■□□□□ 0.29
PFDN2-201ENST00000368010 RPH3ALQ9UNE2 315 aa16.89■□□□□ 0.29
PFDN2-201ENST00000368010 F5H768 121 aa16.88■□□□□ 0.29
PFDN2-201ENST00000368010 ARL6IP6Q8N6S5 226 aa16.88■□□□□ 0.29
PFDN2-201ENST00000368010 TAAR5O14804 337 aa16.87■□□□□ 0.29
PFDN2-201ENST00000368010 ANXA2RQ3ZCQ2 193 aa16.87■□□□□ 0.29
PFDN2-201ENST00000368010 LINC00612Q8N6U2 182 aa16.87■□□□□ 0.29
PFDN2-201ENST00000368010 LENEPQ9Y5L5 61 aa16.87■□□□□ 0.29
PFDN2-201ENST00000368010 SMLR1H3BR10 107 aa16.86■□□□□ 0.29
PFDN2-201ENST00000368010 RGS13O14921 159 aa16.86■□□□□ 0.29
PFDN2-201ENST00000368010 GCHFRP30047 84 aa16.86■□□□□ 0.29
PFDN2-201ENST00000368010 DAZ2Q13117 558 aaKnown RBP16.86■□□□□ 0.29
PFDN2-201ENST00000368010 POM121L12Q8N7R1 296 aa16.86■□□□□ 0.29
PFDN2-201ENST00000368010 C15orf53Q8NAA6 179 aa16.86■□□□□ 0.29
PFDN2-201ENST00000368010 TMED6Q8WW62 240 aa16.86■□□□□ 0.29
PFDN2-201ENST00000368010 GAGE12BA1L429 117 aa16.85■□□□□ 0.29
PFDN2-201ENST00000368010 GAGE7O76087 117 aa16.85■□□□□ 0.29
PFDN2-201ENST00000368010 CXorf1O96002 111 aa16.85■□□□□ 0.29
PFDN2-201ENST00000368010 GAGE12FP0CL80 117 aa16.85■□□□□ 0.29
PFDN2-201ENST00000368010 GAGE12GP0CL81 117 aa16.85■□□□□ 0.29
PFDN2-201ENST00000368010 GAGE12IP0CL82 117 aa16.85■□□□□ 0.29
PFDN2-201ENST00000368010 GOLT1AQ6ZVE7 132 aa16.85■□□□□ 0.29
PFDN2-201ENST00000368010 GSN-AS1Q9NRJ2 163 aa16.85■□□□□ 0.29
PFDN2-201ENST00000368010 TMEM167BQ9NRX6 74 aa16.85■□□□□ 0.29
PFDN2-201ENST00000368010 EPPK1P58107 5090 aaKnown RBP16.85■□□□□ 0.29
PFDN2-201ENST00000368010 KMT2AQ03164 3969 aa16.84■□□□□ 0.29
PFDN2-201ENST00000368010 IGHV1OR15-1A0A075B7D0 117 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms