RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 EXOC3-AS1Q8N2X6 119 aa9.55□□□□□ -0.88
TNFRSF1A-202ENST00000366159 ZNRF2Q8NHG8 242 aa9.55□□□□□ -0.88
TNFRSF1A-202ENST00000366159 PPP1R1CQ8WVI7 109 aa9.55□□□□□ -0.88
TNFRSF1A-202ENST00000366159 PYGO2Q9BRQ0 406 aa9.55□□□□□ -0.88
TNFRSF1A-202ENST00000366159 LINC00467Q9BRT7 94 aa9.55□□□□□ -0.88
TNFRSF1A-202ENST00000366159 RYR1P21817 5038 aa9.54□□□□□ -0.88
TNFRSF1A-202ENST00000366159 CRISP2P16562 243 aa9.54□□□□□ -0.88
TNFRSF1A-202ENST00000366159 DAZ2Q13117 558 aaKnown RBP9.54□□□□□ -0.88
TNFRSF1A-202ENST00000366159 CLINT1Q14677 625 aa9.54□□□□□ -0.88
TNFRSF1A-202ENST00000366159 CCDC28AQ8IWP9 274 aa9.54□□□□□ -0.88
TNFRSF1A-202ENST00000366159 C11orf72Q8NBR9 251 aa9.54□□□□□ -0.88
TNFRSF1A-202ENST00000366159 BLNKQ8WV28 456 aa9.54□□□□□ -0.88
TNFRSF1A-202ENST00000366159 RNF141Q8WVD5 230 aa9.54□□□□□ -0.88
TNFRSF1A-202ENST00000366159 FXYD5Q96DB9 178 aa9.54□□□□□ -0.88
TNFRSF1A-202ENST00000366159 ZNF503Q96F45 646 aa9.54□□□□□ -0.88
TNFRSF1A-202ENST00000366159 TIMM9Q9Y5J7 89 aa9.54□□□□□ -0.88
TNFRSF1A-202ENST00000366159 C7orf71A4D174 169 aa9.53□□□□□ -0.88
TNFRSF1A-202ENST00000366159 J3KRW8 73 aa9.53□□□□□ -0.88
TNFRSF1A-202ENST00000366159 MPC2O95563 127 aa9.53□□□□□ -0.88
TNFRSF1A-202ENST00000366159 NMBP08949 121 aa9.53□□□□□ -0.88
TNFRSF1A-202ENST00000366159 NBEAP1P0C6P0 100 aa9.53□□□□□ -0.88
TNFRSF1A-202ENST00000366159 HOXA5P20719 270 aa9.53□□□□□ -0.88
TNFRSF1A-202ENST00000366159 CD300CQ08708 224 aa9.53□□□□□ -0.88
TNFRSF1A-202ENST00000366159 ICAM4Q14773 271 aa9.53□□□□□ -0.88
TNFRSF1A-202ENST00000366159 MRPL32Q9BYC8 188 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-202ENST00000366159 OR51M1Q9H341 326 aa9.53□□□□□ -0.88
TNFRSF1A-202ENST00000366159 LINC00588Q9Y4M8 146 aa9.53□□□□□ -0.88
TNFRSF1A-202ENST00000366159 NUDT3O95989 172 aa9.52□□□□□ -0.89
TNFRSF1A-202ENST00000366159 ANXA2RQ3ZCQ2 193 aa9.52□□□□□ -0.89
TNFRSF1A-202ENST00000366159 ZFAND2AQ8N6M9 145 aa9.52□□□□□ -0.89
TNFRSF1A-202ENST00000366159 C18orf15Q96N68 181 aa9.52□□□□□ -0.89
TNFRSF1A-202ENST00000366159 ATP5SQ99766 215 aa9.52□□□□□ -0.89
TNFRSF1A-202ENST00000366159 VGLL1Q99990 258 aa9.52□□□□□ -0.89
TNFRSF1A-202ENST00000366159 KRTAP17-1Q9BYP8 105 aa9.52□□□□□ -0.89
TNFRSF1A-202ENST00000366159 FUT9Q9Y231 359 aa9.52□□□□□ -0.89
TNFRSF1A-202ENST00000366159 HSPB11Q9Y547 144 aa9.52□□□□□ -0.89
TNFRSF1A-202ENST00000366159 IGKV2-40A0A087WW87 121 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 GAGE12BA1L429 117 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 SNURFLB1AK76 121 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 H3BNG1 76 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 GAGE7O76087 117 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 IGKV2D-40P01614 121 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 GAGE12FP0CL80 117 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 GAGE12GP0CL81 117 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 GAGE12IP0CL82 117 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 BTN1A1Q13410 526 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 PRR9Q5T870 116 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 C1orf134Q5TEV5 83 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 RXFP4Q8TDU9 374 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 PHYHIPLQ96FC7 376 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 ATG101Q9BSB4 218 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 PAXXQ9BUH6 204 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 AAMDCQ9H7C9 122 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 KCNIP2Q9NS61 270 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 ZNF492Q9P255 531 aa9.51□□□□□ -0.89
TNFRSF1A-202ENST00000366159 TRBV7-9A0A0J9YWB2 115 aa9.5□□□□□ -0.89
TNFRSF1A-202ENST00000366159 NBDYA0A0U1RRE5 68 aa9.5□□□□□ -0.89
TNFRSF1A-202ENST00000366159 C17orf112F2Z3M2 114 aa9.5□□□□□ -0.89
TNFRSF1A-202ENST00000366159 OR10J4P0C629 311 aa9.5□□□□□ -0.89
TNFRSF1A-202ENST00000366159 M6PRP20645 277 aa9.5□□□□□ -0.89
TNFRSF1A-202ENST00000366159 RPL12P30050 165 aaKnown RBP9.5□□□□□ -0.89
TNFRSF1A-202ENST00000366159 DEFA1P59665 94 aa9.5□□□□□ -0.89
TNFRSF1A-202ENST00000366159 DEFA3P59666 94 aa9.5□□□□□ -0.89
TNFRSF1A-202ENST00000366159 FAM122CQ6P4D5 195 aa9.5□□□□□ -0.89
TNFRSF1A-202ENST00000366159 Q6ZQT7 251 aa9.5□□□□□ -0.89
TNFRSF1A-202ENST00000366159 Q6ZTI0 123 aa9.5□□□□□ -0.89
TNFRSF1A-202ENST00000366159 GSN-AS1Q9NRJ2 163 aa9.5□□□□□ -0.89
TNFRSF1A-202ENST00000366159 TRAV26-1A0A087WT03 109 aa9.49□□□□□ -0.89
TNFRSF1A-202ENST00000366159 SSNA1O43805 119 aa9.49□□□□□ -0.89
TNFRSF1A-202ENST00000366159 SPINK4O60575 86 aa9.49□□□□□ -0.89
TNFRSF1A-202ENST00000366159 PET100P0DJ07 73 aa9.49□□□□□ -0.89
TNFRSF1A-202ENST00000366159 RNASE4P34096 147 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-202ENST00000366159 CCL18P55774 89 aa9.49□□□□□ -0.89
TNFRSF1A-202ENST00000366159 OR5I1Q13606 314 aa9.49□□□□□ -0.89
TNFRSF1A-202ENST00000366159 LYPD1Q8N2G4 141 aa9.49□□□□□ -0.89
TNFRSF1A-202ENST00000366159 EIF4E3Q8N5X7 224 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-202ENST00000366159 ZNF680Q8NEM1 530 aa9.49□□□□□ -0.89
TNFRSF1A-202ENST00000366159 GNPNAT1Q96EK6 184 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF1A-202ENST00000366159 TMPRSS5Q9H3S3 457 aa9.49□□□□□ -0.89
TNFRSF1A-202ENST00000366159 WFDC1Q9HC57 220 aa9.49□□□□□ -0.89
TNFRSF1A-202ENST00000366159 RBAKDNA6NC62 111 aa9.48□□□□□ -0.89
TNFRSF1A-202ENST00000366159 GPX1P07203 203 aa9.48□□□□□ -0.89
TNFRSF1A-202ENST00000366159 TCL1AP56279 114 aa9.48□□□□□ -0.89
TNFRSF1A-202ENST00000366159 SOHLH1Q5JUK2 328 aa9.48□□□□□ -0.89
TNFRSF1A-202ENST00000366159 IBA57Q5T440 356 aaKnown RBP9.48□□□□□ -0.89
TNFRSF1A-202ENST00000366159 TMEM78Q5T7P6 136 aa9.48□□□□□ -0.89
TNFRSF1A-202ENST00000366159 SSX7Q7RTT5 188 aa9.48□□□□□ -0.89
TNFRSF1A-202ENST00000366159 KLF12Q9Y4X4 402 aa9.48□□□□□ -0.89
TNFRSF1A-202ENST00000366159 A0A0J9YY99 117 aa9.47□□□□□ -0.89
TNFRSF1A-202ENST00000366159 MED14OSP0DP75 135 aa9.47□□□□□ -0.89
TNFRSF1A-202ENST00000366159 ZNF138P52744 262 aa9.47□□□□□ -0.89
TNFRSF1A-202ENST00000366159 ESRGQ1W209 222 aa9.47□□□□□ -0.89
TNFRSF1A-202ENST00000366159 FFAR4Q5NUL3 377 aa9.47□□□□□ -0.89
TNFRSF1A-202ENST00000366159 VSIG2Q96IQ7 327 aa9.47□□□□□ -0.89
TNFRSF1A-202ENST00000366159 UPK3BQ9BT76 320 aa9.47□□□□□ -0.89
TNFRSF1A-202ENST00000366159 Q9H3A6 140 aa9.47□□□□□ -0.89
TNFRSF1A-202ENST00000366159 BATF3Q9NR55 127 aa9.47□□□□□ -0.89
TNFRSF1A-202ENST00000366159 MBD2Q9UBB5 411 aa9.47□□□□□ -0.89
TNFRSF1A-202ENST00000366159 TP53TG3Q9ULZ0 132 aa9.47□□□□□ -0.89
TNFRSF1A-202ENST00000366159 ABCA13Q86UQ4 5058 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms