RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ODF3L2Q3SX64 289 aa15.34■□□□□ 0.05
SHISA4-201ENST00000362011 FOXI2Q6ZQN5 318 aa15.34■□□□□ 0.05
SHISA4-201ENST00000362011 C9orf47Q6ZRZ4 202 aa15.34■□□□□ 0.05
SHISA4-201ENST00000362011 SGK494Q96LW2 274 aa15.34■□□□□ 0.05
SHISA4-201ENST00000362011 VGLL1Q99990 258 aa15.34■□□□□ 0.05
SHISA4-201ENST00000362011 FAM110AQ9BQ89 295 aa15.34■□□□□ 0.05
SHISA4-201ENST00000362011 PSG8Q9UQ74 426 aa15.34■□□□□ 0.05
SHISA4-201ENST00000362011 KMT2CQ8NEZ4 4911 aaKnown RBP15.33■□□□□ 0.05
SHISA4-201ENST00000362011 NPIPB6E9PJ23 425 aa15.33■□□□□ 0.04
SHISA4-201ENST00000362011 IGLV2-11P01706 119 aa15.33■□□□□ 0.04
SHISA4-201ENST00000362011 ZNF705DP0CH99 300 aaPredicted RBP15.33■□□□□ 0.04
SHISA4-201ENST00000362011 ZNF705BP0CI00 300 aaPredicted RBP15.33■□□□□ 0.04
SHISA4-201ENST00000362011 HIST1H1AQ02539 215 aaPredicted RBP15.33■□□□□ 0.04
SHISA4-201ENST00000362011 ERCC8Q13216 396 aa15.33■□□□□ 0.04
SHISA4-201ENST00000362011 TMEM78Q5T7P6 136 aa15.33■□□□□ 0.04
SHISA4-201ENST00000362011 PRNTQ86SH4 94 aa15.33■□□□□ 0.04
SHISA4-201ENST00000362011 Q86TA4 180 aa15.33■□□□□ 0.04
SHISA4-201ENST00000362011 SAV1Q9H4B6 383 aaPredicted RBP15.33■□□□□ 0.04
SHISA4-201ENST00000362011 A0A0J9YX75 114 aa15.32■□□□□ 0.04
SHISA4-201ENST00000362011 C9JCJ5 164 aa15.32■□□□□ 0.04
SHISA4-201ENST00000362011 DUSP14O95147 198 aaKnown RBP15.32■□□□□ 0.04
SHISA4-201ENST00000362011 CD7P09564 240 aa15.32■□□□□ 0.04
SHISA4-201ENST00000362011 GNG4P50150 75 aa15.32■□□□□ 0.04
SHISA4-201ENST00000362011 OXLD1Q5BKU9 147 aa15.32■□□□□ 0.04
SHISA4-201ENST00000362011 CENPWQ5EE01 88 aa15.32■□□□□ 0.04
SHISA4-201ENST00000362011 IGF2BP2-AS1Q96M15 143 aa15.32■□□□□ 0.04
SHISA4-201ENST00000362011 LINC00477Q96M19 166 aa15.32■□□□□ 0.04
SHISA4-201ENST00000362011 ATP6V1G1O75348 118 aa15.31■□□□□ 0.04
SHISA4-201ENST00000362011 GDF5OSQ5U4N7 250 aa15.31■□□□□ 0.04
SHISA4-201ENST00000362011 GTSCR1Q86UQ5 136 aa15.31■□□□□ 0.04
SHISA4-201ENST00000362011 NIPSNAP3BQ9BS92 247 aa15.31■□□□□ 0.04
SHISA4-201ENST00000362011 AGPAT4-IT1Q9H0P7 198 aa15.31■□□□□ 0.04
SHISA4-201ENST00000362011 TRBV20OR9-2A0A075B6H5 130 aa15.3■□□□□ 0.04
SHISA4-201ENST00000362011 KNCNA6PVL3 124 aa15.3■□□□□ 0.04
SHISA4-201ENST00000362011 ZNF138P52744 262 aa15.3■□□□□ 0.04
SHISA4-201ENST00000362011 TMEM241Q24JQ0 296 aa15.3■□□□□ 0.04
SHISA4-201ENST00000362011 C10orf91Q5T1B1 145 aa15.3■□□□□ 0.04
SHISA4-201ENST00000362011 BAGE2Q86Y30 109 aa15.3■□□□□ 0.04
SHISA4-201ENST00000362011 APRG1Q8IVJ8 170 aa15.3■□□□□ 0.04
SHISA4-201ENST00000362011 NAT8Q9UHE5 227 aa15.3■□□□□ 0.04
SHISA4-201ENST00000362011 CARHSP1Q9Y2V2 147 aaKnown RBP15.3■□□□□ 0.04
SHISA4-201ENST00000362011 DNAH3Q8TD57 4116 aa15.3■□□□□ 0.04
SHISA4-201ENST00000362011 LTAP01374 205 aa15.29■□□□□ 0.04
SHISA4-201ENST00000362011 PRB2P02812 416 aaPredicted RBP15.29■□□□□ 0.04
SHISA4-201ENST00000362011 HLA-DRB4P13762 266 aa15.29■□□□□ 0.04
SHISA4-201ENST00000362011 ZNF124Q15973 351 aa15.29■□□□□ 0.04
SHISA4-201ENST00000362011 ACTL10Q5JWF8 245 aa15.29■□□□□ 0.04
SHISA4-201ENST00000362011 Q8TAT8 98 aa15.29■□□□□ 0.04
SHISA4-201ENST00000362011 NDFIP1Q9BT67 221 aa15.29■□□□□ 0.04
SHISA4-201ENST00000362011 PPP1R14DQ9NXH3 145 aa15.29■□□□□ 0.04
SHISA4-201ENST00000362011 ZNF492Q9P255 531 aa15.29■□□□□ 0.04
SHISA4-201ENST00000362011 ZMAT5Q9UDW3 170 aaKnown RBP15.29■□□□□ 0.04
SHISA4-201ENST00000362011 ZFP30Q9Y2G7 519 aa15.29■□□□□ 0.04
SHISA4-201ENST00000362011 HLA-DRB4X5D2U9 266 aa15.29■□□□□ 0.04
SHISA4-201ENST00000362011 NOTCH3Q9UM47 2321 aa15.28■□□□□ 0.04
SHISA4-201ENST00000362011 SMIM12Q96EX1 92 aa15.28■□□□□ 0.04
SHISA4-201ENST00000362011 C19orf73Q9NVV2 129 aa15.28■□□□□ 0.04
SHISA4-201ENST00000362011 LY96Q9Y6Y9 160 aa15.28■□□□□ 0.04
SHISA4-201ENST00000362011 PGPEP1LA6NFU8 196 aa15.27■□□□□ 0.04
SHISA4-201ENST00000362011 SAPCD1Q5SSQ6 148 aa15.27■□□□□ 0.04
SHISA4-201ENST00000362011 OR4B1Q8NGF8 309 aa15.27■□□□□ 0.04
SHISA4-201ENST00000362011 TVP23CQ96ET8 276 aa15.27■□□□□ 0.04
SHISA4-201ENST00000362011 PRR25Q96S07 402 aa15.27■□□□□ 0.04
SHISA4-201ENST00000362011 ASCL2Q99929 193 aa15.27■□□□□ 0.04
SHISA4-201ENST00000362011 SDF2L1Q9HCN8 221 aa15.27■□□□□ 0.04
SHISA4-201ENST00000362011 LENEPQ9Y5L5 61 aa15.27■□□□□ 0.04
SHISA4-201ENST00000362011 H3BMM0 161 aa15.26■□□□□ 0.03
SHISA4-201ENST00000362011 CT45A10P0DMU9 189 aa15.26■□□□□ 0.03
SHISA4-201ENST00000362011 EGFEM1PQ0D2K5 195 aa15.26■□□□□ 0.03
SHISA4-201ENST00000362011 TMEM183AQ8IXX5 376 aa15.26■□□□□ 0.03
SHISA4-201ENST00000362011 OCC1Q8TAD7 63 aa15.26■□□□□ 0.03
SHISA4-201ENST00000362011 A8MTW9 85 aa15.25■□□□□ 0.03
SHISA4-201ENST00000362011 IGKV3-20P01619 116 aa15.25■□□□□ 0.03
SHISA4-201ENST00000362011 IGLV2-8P01709 118 aa15.25■□□□□ 0.03
SHISA4-201ENST00000362011 APOC3P02656 99 aa15.25■□□□□ 0.03
SHISA4-201ENST00000362011 PNRC1Q12796 327 aaPredicted RBP15.25■□□□□ 0.03
SHISA4-201ENST00000362011 STHQ8IWL8 128 aa15.25■□□□□ 0.03
SHISA4-201ENST00000362011 NHLRC2Q8NBF2 726 aa15.25■□□□□ 0.03
SHISA4-201ENST00000362011 ODF3Q96PU9 254 aa15.25■□□□□ 0.03
SHISA4-201ENST00000362011 WFDC10AQ9H1F0 79 aa15.25■□□□□ 0.03
SHISA4-201ENST00000362011 NBEAL2Q6ZNJ1 2754 aa15.25■□□□□ 0.03
SHISA4-201ENST00000362011 TRBV7-9A0A0J9YWB2 115 aa15.24■□□□□ 0.03
SHISA4-201ENST00000362011 MGST1P10620 155 aaKnown RBP15.24■□□□□ 0.03
SHISA4-201ENST00000362011 S100A1P23297 94 aa15.24■□□□□ 0.03
SHISA4-201ENST00000362011 RPL23P62829 140 aaKnown RBP15.24■□□□□ 0.03
SHISA4-201ENST00000362011 ADIRFQ15847 76 aa15.24■□□□□ 0.03
SHISA4-201ENST00000362011 LINC01551Q86U37 167 aa15.24■□□□□ 0.03
SHISA4-201ENST00000362011 C8orf49Q96NF6 230 aa15.24■□□□□ 0.03
SHISA4-201ENST00000362011 MLST8Q9BVC4 326 aa15.24■□□□□ 0.03
SHISA4-201ENST00000362011 LEPP41159 167 aa15.23■□□□□ 0.03
SHISA4-201ENST00000362011 MRAPQ8TCY5 172 aa15.23■□□□□ 0.03
SHISA4-201ENST00000362011 FAM19A4Q96LR4 140 aa15.23■□□□□ 0.03
SHISA4-201ENST00000362011 CLUHP3Q96NS8 147 aa15.23■□□□□ 0.03
SHISA4-201ENST00000362011 AURKAIP1Q9NWT8 199 aaPredicted RBP15.23■□□□□ 0.03
SHISA4-201ENST00000362011 SMUG1Q53HV7 270 aa15.22■□□□□ 0.03
SHISA4-201ENST00000362011 TRPT1Q86TN4 253 aaKnown RBP15.22■□□□□ 0.03
SHISA4-201ENST00000362011 BIN3Q9NQY0 253 aa15.22■□□□□ 0.03
SHISA4-201ENST00000362011 RYR3Q15413 4870 aa15.22■□□□□ 0.03
SHISA4-201ENST00000362011 K7EN84 100 aa15.21■□□□□ 0.03
SHISA4-201ENST00000362011 M0R036 132 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms