RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 KLRC4O43908 158 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 GNG7O60262 68 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 APODP05090 189 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 CRYGDP07320 174 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 COX6CP09669 75 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 OR5G3P0C626 314 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 KRTAP2-3P0C7H8 128 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 DEFA4P12838 97 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 MUC1P15941 1255 aaPredicted RBP0.96□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF816Q0VGE8 651 aaPredicted RBP0.96□□□□□ -2.26
BRCA1-202ENST00000354071 KRTAP25-1Q3LHN0 102 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM136Q6ZRR5 245 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 TRAPPC6BQ86SZ2 158 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM86AQ8N2M4 240 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 TEX29Q8N6K0 151 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 OR51A4Q8NGJ6 313 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 OR5D14Q8NGL3 314 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 RPS4Y2Q8TD47 263 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 RAB37Q96AX2 223 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 GALMQ96C23 342 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 LINC00052Q96N35 136 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 DERL1Q9BUN8 251 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 SEC11CQ9BY50 192 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 KRTAP2-4Q9BYR9 128 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 TLNRD1Q9H1K6 362 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 SLC35B3Q9H1N7 401 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 COL27A1Q8IZC6 1860 aaPredicted RBP0.96□□□□□ -2.26
BRCA1-202ENST00000354071 HIVEP1P15822 2718 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 SHROOM3Q8TF72 1996 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 COL6A6A6NMZ7 2263 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 DOPEY2Q9Y3R5 2298 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 IGLV3-16A0A075B6K0 115 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 LOC107984156A0A0G2JMH3 177 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 TCRBV3S1A0A5B6 114 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 MAP1LC3B2A6NCE7 125 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 SNRPGP15A8MWD9 76 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 LST1O00453 97 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 OR4E1P0C645 316 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 CKS1BP61024 79 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 RHOBP62745 196 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 SELENOWP63302 87 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 PLCXD2Q0VAA5 305 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 PLGLAQ15195 96 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 NOXRED1Q6NXP6 359 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 SH2D6Q7Z4S9 175 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 SPATA12Q7Z6I5 190 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 LYPD6Q86Y78 171 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 ARL17AQ8IVW1 177 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 RNF182Q8N6D2 247 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 OR9A2Q8NGT5 310 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 OR2T10Q8NGZ9 312 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 LCN9Q8WX39 176 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 COPS9Q8WXC6 57 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 ZC2HC1AQ96GY0 325 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 DDA1Q9BW61 102 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 NMES1Q9C002 83 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 MAP1LC3BQ9GZQ8 125 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 DUSP21Q9H596 190 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 ACER3Q9NUN7 267 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 RASL12Q9NYN1 266 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 UQCR10Q9UDW1 63 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 RPUSD1Q9UJJ7 312 aaKnown RBP0.96□□□□□ -2.26
BRCA1-202ENST00000354071 CYSLTR1Q9Y271 337 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 SLC35A3Q9Y2D2 325 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 RNF11Q9Y3C5 154 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 CACNA1SQ13698 1873 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 ADGRG4Q8IZF6 3080 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 PRR14LQ5THK1 2151 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 DIDO1Q9BTC0 2240 aaKnown RBP0.96□□□□□ -2.26
BRCA1-202ENST00000354071 TRDV1A0A1B0GX56 115 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 DUXBA0A1W2PPF3 345 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 PQLC2LA1A4F0 135 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 C7orf77A4D0Y5 90 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 LINC00862A6NCI5 91 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 GABARAPH6UMI1 98 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 CORTO00230 105 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 COX7A2LO14548 114 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 GYPAP02724 150 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 GUSBP08236 651 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF728P0DKX0 622 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 PTHLHP12272 177 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 CYBAP13498 195 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 CD200P41217 278 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 CSN1S1P47710 185 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 TAS2R45P59539 299 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 RPS25P62851 125 aaKnown RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 HBA1P69905 142 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 CATR1Q13166 79 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 LTC4SQ16873 150 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 AADACL3Q5VUY0 350 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 FAM71E1Q6IPT2 247 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 RPS27LQ71UM5 84 aaKnown RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 OR4S1Q8NGB4 309 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 OR4B1Q8NGF8 309 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 CD200R1Q8TD46 325 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ADAT3Q96EY9 351 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 TRIB3Q96RU7 358 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 SPANXA1Q9NS26 97 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ANAPC11Q9NYG5 84 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 TRAPPC2LQ9UL33 140 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms