RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 LYSTQ99698 3801 aa11.9□□□□□ -0.5
RAB5C-201ENST00000346213 IGKV3-7A0A075B6H7 116 aa11.9□□□□□ -0.5
RAB5C-201ENST00000346213 NBEAP1P0C6P0 100 aa11.9□□□□□ -0.5
RAB5C-201ENST00000346213 CRYBB3P26998 211 aa11.9□□□□□ -0.5
RAB5C-201ENST00000346213 ANAPC16Q96DE5 110 aa11.9□□□□□ -0.5
RAB5C-201ENST00000346213 SPAG8Q99932 426 aaPredicted RBP11.9□□□□□ -0.5
RAB5C-201ENST00000346213 TRBV20OR9-2A0A075B6H5 130 aa11.89□□□□□ -0.51
RAB5C-201ENST00000346213 TFPI2P48307 235 aa11.89□□□□□ -0.51
RAB5C-201ENST00000346213 RBPMS2Q6ZRY4 209 aaKnown RBP11.89□□□□□ -0.51
RAB5C-201ENST00000346213 APRG1Q8IVJ8 170 aa11.89□□□□□ -0.51
RAB5C-201ENST00000346213 GBGT1Q8N5D6 347 aa11.89□□□□□ -0.51
RAB5C-201ENST00000346213 C2CD4CQ8TF44 421 aa11.89□□□□□ -0.51
RAB5C-201ENST00000346213 HELTA6NFD8 242 aa11.88□□□□□ -0.51
RAB5C-201ENST00000346213 HIST1H1EP10412 219 aaKnown RBP11.88□□□□□ -0.51
RAB5C-201ENST00000346213 RAB4BP61018 213 aa11.88□□□□□ -0.51
RAB5C-201ENST00000346213 USF2Q15853 346 aaPredicted RBP11.88□□□□□ -0.51
RAB5C-201ENST00000346213 LEMD1Q68G75 181 aa11.88□□□□□ -0.51
RAB5C-201ENST00000346213 ZMAT4Q9H898 229 aa11.88□□□□□ -0.51
RAB5C-201ENST00000346213 ELOBQ15370 118 aa11.87□□□□□ -0.51
RAB5C-201ENST00000346213 SPATA25Q9BR10 227 aa11.87□□□□□ -0.51
RAB5C-201ENST00000346213 RNF24Q9Y225 148 aa11.87□□□□□ -0.51
RAB5C-201ENST00000346213 RAB5AP20339 215 aa11.87□□□□□ -0.51
RAB5C-201ENST00000346213 LBHQ53QV2 105 aaPredicted RBP11.87□□□□□ -0.51
RAB5C-201ENST00000346213 BPIFA4PQ86YQ2 179 aa11.87□□□□□ -0.51
RAB5C-201ENST00000346213 OCC1Q8TAD7 63 aa11.87□□□□□ -0.51
RAB5C-201ENST00000346213 MUC7Q8TAX7 377 aa11.87□□□□□ -0.51
RAB5C-201ENST00000346213 H7BYZ3 331 aa11.86□□□□□ -0.51
RAB5C-201ENST00000346213 PPP1R2P9O14990 202 aa11.86□□□□□ -0.51
RAB5C-201ENST00000346213 TAS2R60P59551 318 aa11.86□□□□□ -0.51
RAB5C-201ENST00000346213 RANP62826 216 aaKnown RBP11.86□□□□□ -0.51
RAB5C-201ENST00000346213 TCF24Q7RTU0 167 aa11.86□□□□□ -0.51
RAB5C-201ENST00000346213 BLNKQ8WV28 456 aa11.86□□□□□ -0.51
RAB5C-201ENST00000346213 U3KQE9 123 aa11.86□□□□□ -0.51
RAB5C-201ENST00000346213 TENM2Q9NT68 2774 aa11.86□□□□□ -0.51
RAB5C-201ENST00000346213 PGPA6NDG6 321 aa11.85□□□□□ -0.51
RAB5C-201ENST00000346213 PGPEP1LA6NFU8 196 aa11.85□□□□□ -0.51
RAB5C-201ENST00000346213 MRPS12O15235 138 aaKnown RBP11.85□□□□□ -0.51
RAB5C-201ENST00000346213 S100A7P31151 101 aa11.85□□□□□ -0.51
RAB5C-201ENST00000346213 SNRPEP62304 92 aaKnown RBP11.85□□□□□ -0.51
RAB5C-201ENST00000346213 CASC10Q5T4H9 136 aa11.85□□□□□ -0.51
RAB5C-201ENST00000346213 MAP6D1Q9H9H5 199 aa11.85□□□□□ -0.51
RAB5C-201ENST00000346213 ZNF586Q9NXT0 402 aa11.85□□□□□ -0.51
RAB5C-201ENST00000346213 PEX7O00628 323 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 PFN1P07737 140 aaKnown RBP11.84□□□□□ -0.51
RAB5C-201ENST00000346213 CENPWQ5EE01 88 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 ZFAND6Q6FIF0 208 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 OVOL2Q9BRP0 275 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 MS4A6AQ9H2W1 248 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 EPDR1Q9UM22 224 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 URGCP-MRPS24S4R325 110 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 SNRPCP09234 159 aaKnown RBP11.84□□□□□ -0.51
RAB5C-201ENST00000346213 IGLC2P0DOY2 106 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 GNG4P50150 75 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 CNN1P51911 297 aaKnown RBP11.84□□□□□ -0.51
RAB5C-201ENST00000346213 WFDC3Q8IUB2 231 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 C5orf17Q8NAS9 161 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 Q9H3A6 140 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 OTORQ9NRC9 128 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 RABAC1Q9UI14 185 aa11.84□□□□□ -0.51
RAB5C-201ENST00000346213 TRBV24-1A0A075B6N3 115 aa11.83□□□□□ -0.52
RAB5C-201ENST00000346213 K7EN84 100 aa11.83□□□□□ -0.52
RAB5C-201ENST00000346213 SLC25A5P05141 298 aaKnown RBP11.83□□□□□ -0.52
RAB5C-201ENST00000346213 CXCL1P09341 107 aa11.83□□□□□ -0.52
RAB5C-201ENST00000346213 RPL35AP18077 110 aaKnown RBP11.83□□□□□ -0.52
RAB5C-201ENST00000346213 PLECQ15149 4684 aaKnown RBP11.83□□□□□ -0.52
RAB5C-201ENST00000346213 SFRP2Q96HF1 295 aa11.83□□□□□ -0.52
RAB5C-201ENST00000346213 IGF2BP2-AS1Q96M15 143 aa11.83□□□□□ -0.52
RAB5C-201ENST00000346213 TRBV19A0A075B6N1 114 aa11.82□□□□□ -0.52
RAB5C-201ENST00000346213 LOC102724200A0A096LPH7 203 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-201ENST00000346213 TGIF2-C20orf24A0A0A6YYL0 155 aa11.82□□□□□ -0.52
RAB5C-201ENST00000346213 GALR1P47211 349 aa11.82□□□□□ -0.52
RAB5C-201ENST00000346213 LYPD1Q8N2G4 141 aa11.82□□□□□ -0.52
RAB5C-201ENST00000346213 GLMPQ8WWB7 406 aa11.82□□□□□ -0.52
RAB5C-201ENST00000346213 PYGO2Q9BRQ0 406 aa11.82□□□□□ -0.52
RAB5C-201ENST00000346213 HYDINQ4G0P3 5121 aa11.82□□□□□ -0.52
RAB5C-201ENST00000346213 OR4C46A6NHA9 309 aa11.81□□□□□ -0.52
RAB5C-201ENST00000346213 IGLV2-8P01709 118 aa11.81□□□□□ -0.52
RAB5C-201ENST00000346213 OR10G8Q8NGN5 311 aa11.81□□□□□ -0.52
RAB5C-201ENST00000346213 DCANP1Q8TF63 244 aa11.81□□□□□ -0.52
RAB5C-201ENST00000346213 IMMP2LQ96T52 175 aa11.81□□□□□ -0.52
RAB5C-201ENST00000346213 ATG101Q9BSB4 218 aa11.81□□□□□ -0.52
RAB5C-201ENST00000346213 KLF12Q9Y4X4 402 aa11.81□□□□□ -0.52
RAB5C-201ENST00000346213 H3BTX0 84 aa11.81□□□□□ -0.52
RAB5C-201ENST00000346213 GCGP01275 180 aa11.81□□□□□ -0.52
RAB5C-201ENST00000346213 RPL7P18124 248 aaKnown RBP11.81□□□□□ -0.52
RAB5C-201ENST00000346213 GNG5P63218 68 aa11.81□□□□□ -0.52
RAB5C-201ENST00000346213 PDE6HQ13956 83 aa11.81□□□□□ -0.52
RAB5C-201ENST00000346213 TMEM183BQ1AE95 376 aa11.81□□□□□ -0.52
RAB5C-201ENST00000346213 DNAH1Q9P2D7 4330 aa11.8□□□□□ -0.52
RAB5C-201ENST00000346213 C3orf84H3BNL1 204 aa11.8□□□□□ -0.52
RAB5C-201ENST00000346213 K7EQG2 157 aa11.8□□□□□ -0.52
RAB5C-201ENST00000346213 DEFB135Q30KP9 77 aa11.8□□□□□ -0.52
RAB5C-201ENST00000346213 FAM210BQ96KR6 192 aa11.8□□□□□ -0.52
RAB5C-201ENST00000346213 LINC00479Q96M42 142 aa11.8□□□□□ -0.52
RAB5C-201ENST00000346213 TCRAP04437 139 aa11.79□□□□□ -0.52
RAB5C-201ENST00000346213 RPS10P46783 165 aaKnown RBP11.79□□□□□ -0.52
RAB5C-201ENST00000346213 DEFB131AP59861 70 aa11.79□□□□□ -0.52
RAB5C-201ENST00000346213 FABP9Q0Z7S8 132 aa11.79□□□□□ -0.52
RAB5C-201ENST00000346213 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
RAB5C-201ENST00000346213 SIGLEC15Q6ZMC9 328 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms