RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 FRAS1Q86XX4 4008 aa12.49□□□□□ -0.41
CKLF-202ENST00000345436 DNAH10Q8IVF4 4471 aa12.49□□□□□ -0.41
CKLF-202ENST00000345436 GAGE12BA1L429 117 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 GAGE7O76087 117 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 GAGE12FP0CL80 117 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 GAGE12GP0CL81 117 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 GAGE12IP0CL82 117 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 RNASE4P34096 147 aaKnown RBP12.48□□□□□ -0.41
CKLF-202ENST00000345436 TAS2R45P59539 299 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 ERCC8Q13216 396 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 MIR17HGQ75NE6 70 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 LYPD1Q8N2G4 141 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 EXOC3-AS1Q8N2X6 119 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 EIF4E3Q8N5X7 224 aaKnown RBP12.48□□□□□ -0.41
CKLF-202ENST00000345436 RNF141Q8WVD5 230 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 ATP5SQ99766 215 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 LINC00467Q9BRT7 94 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 SLC25A2Q9BXI2 301 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 AGPAT4-IT1Q9H0P7 198 aa12.48□□□□□ -0.41
CKLF-202ENST00000345436 TRGV2A0A075B6R0 118 aa12.47□□□□□ -0.41
CKLF-202ENST00000345436 OR7C2O60412 319 aa12.47□□□□□ -0.41
CKLF-202ENST00000345436 GCSAMLQ5JQS6 135 aa12.47□□□□□ -0.41
CKLF-202ENST00000345436 FAM122CQ6P4D5 195 aa12.47□□□□□ -0.41
CKLF-202ENST00000345436 LINC00612Q8N6U2 182 aa12.47□□□□□ -0.41
CKLF-202ENST00000345436 RXFP4Q8TDU9 374 aa12.47□□□□□ -0.41
CKLF-202ENST00000345436 TRAV26-1A0A087WT03 109 aa12.46□□□□□ -0.41
CKLF-202ENST00000345436 TRBV7-9A0A0J9YWB2 115 aa12.46□□□□□ -0.41
CKLF-202ENST00000345436 KLLNB2CW77 178 aa12.46□□□□□ -0.41
CKLF-202ENST00000345436 H3BNG1 76 aa12.46□□□□□ -0.41
CKLF-202ENST00000345436 RGS13O14921 159 aa12.46□□□□□ -0.41
CKLF-202ENST00000345436 MPC2O95563 127 aa12.46□□□□□ -0.41
CKLF-202ENST00000345436 CRISP2P16562 243 aa12.46□□□□□ -0.41
CKLF-202ENST00000345436 IFITM3Q01628 133 aa12.46□□□□□ -0.41
CKLF-202ENST00000345436 ANXA2RQ3ZCQ2 193 aa12.46□□□□□ -0.41
CKLF-202ENST00000345436 FAM167A-AS1Q96KT0 104 aa12.46□□□□□ -0.41
CKLF-202ENST00000345436 BATF3Q9NR55 127 aa12.46□□□□□ -0.41
CKLF-202ENST00000345436 DNAH6Q9C0G6 4158 aa12.46□□□□□ -0.41
CKLF-202ENST00000345436 H0YIZ8 118 aa12.45□□□□□ -0.42
CKLF-202ENST00000345436 RPL12P30050 165 aaKnown RBP12.45□□□□□ -0.42
CKLF-202ENST00000345436 H2BFSP57053 126 aa12.45□□□□□ -0.42
CKLF-202ENST00000345436 KHDC3LQ587J8 217 aa12.45□□□□□ -0.42
CKLF-202ENST00000345436 FFAR4Q5NUL3 377 aa12.45□□□□□ -0.42
CKLF-202ENST00000345436 HSPB11Q9Y547 144 aa12.45□□□□□ -0.42
CKLF-202ENST00000345436 NBDYA0A0U1RRE5 68 aa12.44□□□□□ -0.42
CKLF-202ENST00000345436 ZNF324O75467 553 aaPredicted RBP12.44□□□□□ -0.42
CKLF-202ENST00000345436 OR10J4P0C629 311 aa12.44□□□□□ -0.42
CKLF-202ENST00000345436 ZNF138P52744 262 aa12.44□□□□□ -0.42
CKLF-202ENST00000345436 FAM74A1Q5RGS3 127 aa12.44□□□□□ -0.42
CKLF-202ENST00000345436 SSX7Q7RTT5 188 aa12.44□□□□□ -0.42
CKLF-202ENST00000345436 ZNRF2Q8NHG8 242 aa12.44□□□□□ -0.42
CKLF-202ENST00000345436 FAM19A4Q96LR4 140 aa12.44□□□□□ -0.42
CKLF-202ENST00000345436 ARPC5LQ9BPX5 153 aa12.44□□□□□ -0.42
CKLF-202ENST00000345436 ZNF492Q9P255 531 aa12.44□□□□□ -0.42
CKLF-202ENST00000345436 A0A1B0GVY2 172 aa12.43□□□□□ -0.42
CKLF-202ENST00000345436 RBAKDNA6NC62 111 aa12.43□□□□□ -0.42
CKLF-202ENST00000345436 MED14OSP0DP75 135 aa12.43□□□□□ -0.42
CKLF-202ENST00000345436 RANP62826 216 aaKnown RBP12.43□□□□□ -0.42
CKLF-202ENST00000345436 UBE2L3P68036 154 aaKnown RBP12.43□□□□□ -0.42
CKLF-202ENST00000345436 CD300CQ08708 224 aa12.43□□□□□ -0.42
CKLF-202ENST00000345436 BTN1A1Q13410 526 aa12.43□□□□□ -0.42
CKLF-202ENST00000345436 TTC32Q5I0X7 151 aa12.43□□□□□ -0.42
CKLF-202ENST00000345436 IBA57Q5T440 356 aaKnown RBP12.43□□□□□ -0.42
CKLF-202ENST00000345436 FXYD5Q96DB9 178 aa12.43□□□□□ -0.42
CKLF-202ENST00000345436 C18orf15Q96N68 181 aa12.43□□□□□ -0.42
CKLF-202ENST00000345436 GSN-AS1Q9NRJ2 163 aa12.43□□□□□ -0.42
CKLF-202ENST00000345436 LINC00588Q9Y4M8 146 aa12.43□□□□□ -0.42
CKLF-202ENST00000345436 IGKV2-40A0A087WW87 121 aaPredicted RBP12.42□□□□□ -0.42
CKLF-202ENST00000345436 TRGV1A0A0A0MS02 117 aa12.42□□□□□ -0.42
CKLF-202ENST00000345436 A0A0J9YY99 117 aa12.42□□□□□ -0.42
CKLF-202ENST00000345436 A0A1W2PPV4 95 aa12.42□□□□□ -0.42
CKLF-202ENST00000345436 IGKV2D-40P01614 121 aaPredicted RBP12.42□□□□□ -0.42
CKLF-202ENST00000345436 SLAQ13239 276 aa12.42□□□□□ -0.42
CKLF-202ENST00000345436 ACOT6Q3I5F7 207 aaPredicted RBP12.42□□□□□ -0.42
CKLF-202ENST00000345436 Q6ZTI0 123 aa12.42□□□□□ -0.42
CKLF-202ENST00000345436 Q9H8V8 135 aa12.42□□□□□ -0.42
CKLF-202ENST00000345436 IGHV1OR15-1A0A075B7D0 117 aa12.41□□□□□ -0.42
CKLF-202ENST00000345436 TCL1AP56279 114 aa12.41□□□□□ -0.42
CKLF-202ENST00000345436 C6orf223Q8N319 242 aa12.41□□□□□ -0.42
CKLF-202ENST00000345436 CMTM2Q8TAZ6 248 aa12.41□□□□□ -0.42
CKLF-202ENST00000345436 VGLL1Q99990 258 aa12.41□□□□□ -0.42
CKLF-202ENST00000345436 LENEPQ9Y5L5 61 aa12.41□□□□□ -0.42
CKLF-202ENST00000345436 SMIM3Q9BZL3 60 aa12.4□□□□□ -0.42
CKLF-202ENST00000345436 Q9H3A6 140 aa12.4□□□□□ -0.42
CKLF-202ENST00000345436 TMPRSS5Q9H3S3 457 aa12.4□□□□□ -0.42
CKLF-202ENST00000345436 MBD2Q9UBB5 411 aa12.4□□□□□ -0.42
CKLF-202ENST00000345436 HOXA5P20719 270 aa12.39□□□□□ -0.43
CKLF-202ENST00000345436 ZNF415Q09FC8 603 aa12.39□□□□□ -0.43
CKLF-202ENST00000345436 PQLC2Q6ZP29 291 aa12.39□□□□□ -0.43
CKLF-202ENST00000345436 ZFAND2AQ8N6M9 145 aa12.39□□□□□ -0.43
CKLF-202ENST00000345436 C11orf72Q8NBR9 251 aa12.39□□□□□ -0.43
CKLF-202ENST00000345436 PHYHIPLQ96FC7 376 aa12.39□□□□□ -0.43
CKLF-202ENST00000345436 HECTD4Q9Y4D8 3996 aa12.38□□□□□ -0.43
CKLF-202ENST00000345436 SPINK4O60575 86 aa12.38□□□□□ -0.43
CKLF-202ENST00000345436 BTF3P20290 206 aaKnown RBP12.38□□□□□ -0.43
CKLF-202ENST00000345436 ARL6IP6Q8N6S5 226 aa12.38□□□□□ -0.43
CKLF-202ENST00000345436 OTORQ9NRC9 128 aa12.38□□□□□ -0.43
CKLF-202ENST00000345436 A0A1W2PPQ1 181 aa12.37□□□□□ -0.43
CKLF-202ENST00000345436 ZNF266Q14584 549 aa12.37□□□□□ -0.43
CKLF-202ENST00000345436 FAM159AQ6UWV7 190 aa12.37□□□□□ -0.43
CKLF-202ENST00000345436 TMED6Q8WW62 240 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms