RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 MUC7Q8TAX7 377 aa10.18□□□□□ -0.78
TPM4-202ENST00000344824 RPUSD4Q96CM3 377 aaKnown RBP10.18□□□□□ -0.78
TPM4-202ENST00000344824 TXNDC17Q9BRA2 123 aa10.18□□□□□ -0.78
TPM4-202ENST00000344824 PRELID1Q9Y255 219 aa10.18□□□□□ -0.78
TPM4-202ENST00000344824 PRAC2D3DTV9 90 aa10.17□□□□□ -0.78
TPM4-202ENST00000344824 AKR1C3P42330 323 aa10.17□□□□□ -0.78
TPM4-202ENST00000344824 SAMD13Q5VXD3 122 aa10.17□□□□□ -0.78
TPM4-202ENST00000344824 UQCC3Q6UW78 93 aa10.17□□□□□ -0.78
TPM4-202ENST00000344824 SGK494Q96LW2 274 aa10.17□□□□□ -0.78
TPM4-202ENST00000344824 TRAV2A0A0B4J234 112 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 TRAV34A0A0B4J273 112 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 DIRC3C9JPN6 131 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 F6UB75 175 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 TCRAP04437 139 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 SFTA3P0C7M3 94 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 ZNF705DP0CH99 300 aaPredicted RBP10.16□□□□□ -0.78
TPM4-202ENST00000344824 ZNF705BP0CI00 300 aaPredicted RBP10.16□□□□□ -0.78
TPM4-202ENST00000344824 CMC4P56277 68 aaPredicted RBP10.16□□□□□ -0.78
TPM4-202ENST00000344824 ZFAND6Q6FIF0 208 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 EIF4E3Q8N5X7 224 aaKnown RBP10.16□□□□□ -0.78
TPM4-202ENST00000344824 LINC00479Q96M42 142 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 ATG101Q9BSB4 218 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 DERL1Q9BUN8 251 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 SLC35B3Q9H1N7 401 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 KMT2CQ8NEZ4 4911 aaKnown RBP10.16□□□□□ -0.78
TPM4-202ENST00000344824 ERCC8Q13216 396 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 HIST1H2BAQ96A08 127 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 C11orf52Q96A22 123 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 MRPL53Q96EL3 112 aaKnown RBP10.16□□□□□ -0.78
TPM4-202ENST00000344824 EDA2RQ9HAV5 297 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 CLEC5AQ9NY25 188 aa10.16□□□□□ -0.78
TPM4-202ENST00000344824 STARD9Q9P2P6 4700 aa10.15□□□□□ -0.78
TPM4-202ENST00000344824 TRAV8-1A0A0A6YYK1 113 aa10.15□□□□□ -0.79
TPM4-202ENST00000344824 TMEM250H0YL14 139 aa10.15□□□□□ -0.79
TPM4-202ENST00000344824 C3orf84H3BNL1 204 aa10.15□□□□□ -0.79
TPM4-202ENST00000344824 CNN1P51911 297 aaKnown RBP10.15□□□□□ -0.79
TPM4-202ENST00000344824 TCEAL7Q9BRU2 100 aa10.15□□□□□ -0.79
TPM4-202ENST00000344824 PARLQ9H300 379 aa10.15□□□□□ -0.79
TPM4-202ENST00000344824 SMDT1Q9H4I9 107 aa10.15□□□□□ -0.79
TPM4-202ENST00000344824 K7EQM0 130 aa10.14□□□□□ -0.79
TPM4-202ENST00000344824 UBE2G1P62253 170 aa10.14□□□□□ -0.79
TPM4-202ENST00000344824 HIST1H1AQ02539 215 aaPredicted RBP10.14□□□□□ -0.79
TPM4-202ENST00000344824 SOHLH1Q5JUK2 328 aa10.14□□□□□ -0.79
TPM4-202ENST00000344824 STHQ8IWL8 128 aa10.14□□□□□ -0.79
TPM4-202ENST00000344824 C2CD4CQ8TF44 421 aa10.14□□□□□ -0.79
TPM4-202ENST00000344824 VGLL1Q99990 258 aa10.14□□□□□ -0.79
TPM4-202ENST00000344824 OVOL2Q9BRP0 275 aa10.14□□□□□ -0.79
TPM4-202ENST00000344824 TMEM218A2RU14 115 aa10.13□□□□□ -0.79
TPM4-202ENST00000344824 KNCNA6PVL3 124 aa10.13□□□□□ -0.79
TPM4-202ENST00000344824 ZNF727A8MUV8 499 aa10.13□□□□□ -0.79
TPM4-202ENST00000344824 F8W036 122 aa10.13□□□□□ -0.79
TPM4-202ENST00000344824 CA1P00915 261 aaPredicted RBP10.13□□□□□ -0.79
TPM4-202ENST00000344824 RPL35P42766 123 aaKnown RBP10.13□□□□□ -0.79
TPM4-202ENST00000344824 GDF5OSQ5U4N7 250 aa10.13□□□□□ -0.79
TPM4-202ENST00000344824 PRNTQ86SH4 94 aa10.13□□□□□ -0.79
TPM4-202ENST00000344824 OR10J6PQ8NGY7 276 aa10.13□□□□□ -0.79
TPM4-202ENST00000344824 Q8TAT8 98 aa10.13□□□□□ -0.79
TPM4-202ENST00000344824 SMIM7Q9BQ49 75 aa10.13□□□□□ -0.79
TPM4-202ENST00000344824 KIR2DL5BA0A0G2JN68 375 aa10.12□□□□□ -0.79
TPM4-202ENST00000344824 KIR2DL5BA0A0G2JPC4 375 aa10.12□□□□□ -0.79
TPM4-202ENST00000344824 UBE2CO00762 179 aa10.12□□□□□ -0.79
TPM4-202ENST00000344824 SPRY2O43597 315 aa10.12□□□□□ -0.79
TPM4-202ENST00000344824 IGKV3-20P01619 116 aa10.12□□□□□ -0.79
TPM4-202ENST00000344824 ACTL10Q5JWF8 245 aa10.12□□□□□ -0.79
TPM4-202ENST00000344824 EBLN2Q6P2I7 272 aa10.12□□□□□ -0.79
TPM4-202ENST00000344824 KIR2DL5AQ8N109 375 aa10.12□□□□□ -0.79
TPM4-202ENST00000344824 OR8A1Q8NGG7 326 aa10.12□□□□□ -0.79
TPM4-202ENST00000344824 KIR2DL5BQ8NHK3 375 aa10.12□□□□□ -0.79
TPM4-202ENST00000344824 CSTL1Q9H114 145 aa10.12□□□□□ -0.79
TPM4-202ENST00000344824 CSMD3Q7Z407 3707 aa10.12□□□□□ -0.79
TPM4-202ENST00000344824 SERTM2A0A1B0GWG4 89 aa10.11□□□□□ -0.79
TPM4-202ENST00000344824 NDUFS6O75380 124 aaKnown RBP10.11□□□□□ -0.79
TPM4-202ENST00000344824 ADCYAP1P18509 176 aa10.11□□□□□ -0.79
TPM4-202ENST00000344824 FLI1Q01543 452 aaPredicted RBP10.11□□□□□ -0.79
TPM4-202ENST00000344824 CENPWQ5EE01 88 aa10.11□□□□□ -0.79
TPM4-202ENST00000344824 CASC10Q5T4H9 136 aa10.11□□□□□ -0.79
TPM4-202ENST00000344824 TMEM78Q5T7P6 136 aa10.11□□□□□ -0.79
TPM4-202ENST00000344824 Q86TA4 180 aa10.11□□□□□ -0.79
TPM4-202ENST00000344824 TMEM75Q8N9X5 138 aa10.11□□□□□ -0.79
TPM4-202ENST00000344824 NHLRC2Q8NBF2 726 aa10.11□□□□□ -0.79
TPM4-202ENST00000344824 FMC1Q96HJ9 113 aa10.11□□□□□ -0.79
TPM4-202ENST00000344824 PSG8Q9UQ74 426 aa10.11□□□□□ -0.79
TPM4-202ENST00000344824 PGPEP1LA6NFU8 196 aa10.1□□□□□ -0.79
TPM4-202ENST00000344824 GNG4P50150 75 aa10.1□□□□□ -0.79
TPM4-202ENST00000344824 TMEM183BQ1AE95 376 aa10.1□□□□□ -0.79
TPM4-202ENST00000344824 FOXI2Q6ZQN5 318 aa10.1□□□□□ -0.79
TPM4-202ENST00000344824 Q6ZWC4 215 aa10.1□□□□□ -0.79
TPM4-202ENST00000344824 ARL6IP6Q8N6S5 226 aa10.1□□□□□ -0.79
TPM4-202ENST00000344824 OR4B1Q8NGF8 309 aa10.1□□□□□ -0.79
TPM4-202ENST00000344824 AGPAT4-IT1Q9H0P7 198 aa10.1□□□□□ -0.79
TPM4-202ENST00000344824 SAV1Q9H4B6 383 aaPredicted RBP10.1□□□□□ -0.79
TPM4-202ENST00000344824 A0A0J9YWU9 116 aa10.09□□□□□ -0.79
TPM4-202ENST00000344824 A0A0J9YX75 114 aa10.09□□□□□ -0.79
TPM4-202ENST00000344824 RBAKDNA6NC62 111 aa10.09□□□□□ -0.79
TPM4-202ENST00000344824 ATP6V1G1O75348 118 aa10.09□□□□□ -0.79
TPM4-202ENST00000344824 IGLV2-11P01706 119 aa10.09□□□□□ -0.79
TPM4-202ENST00000344824 BAGE2Q86Y30 109 aa10.09□□□□□ -0.79
TPM4-202ENST00000344824 RNF183Q96D59 192 aa10.09□□□□□ -0.79
TPM4-202ENST00000344824 IGF2BP2-AS1Q96M15 143 aa10.09□□□□□ -0.79
TPM4-202ENST00000344824 TP53TG1Q9Y2A0 90 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms