RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 STHQ8IWL8 128 aa13.2□□□□□ -0.3
SDCBP2-201ENST00000339987 LINC00477Q96M19 166 aa13.2□□□□□ -0.3
SDCBP2-201ENST00000339987 FBLL1A6NHQ2 334 aaKnown RBP13.19□□□□□ -0.3
SDCBP2-201ENST00000339987 TMEM75Q8N9X5 138 aa13.19□□□□□ -0.3
SDCBP2-201ENST00000339987 C2CD4CQ8TF44 421 aa13.19□□□□□ -0.3
SDCBP2-201ENST00000339987 VGLL1Q99990 258 aa13.19□□□□□ -0.3
SDCBP2-201ENST00000339987 AGPAT4-IT1Q9H0P7 198 aa13.19□□□□□ -0.3
SDCBP2-201ENST00000339987 NOTCH1P46531 2555 aa13.18□□□□□ -0.3
SDCBP2-201ENST00000339987 TMEM250H0YL14 139 aa13.18□□□□□ -0.3
SDCBP2-201ENST00000339987 IGHV4-30-4P0DP06 118 aa13.18□□□□□ -0.3
SDCBP2-201ENST00000339987 AKR1C3P42330 323 aa13.18□□□□□ -0.3
SDCBP2-201ENST00000339987 ERCC8Q13216 396 aa13.18□□□□□ -0.3
SDCBP2-201ENST00000339987 TMEM78Q5T7P6 136 aa13.18□□□□□ -0.3
SDCBP2-201ENST00000339987 OR4B1Q8NGF8 309 aa13.18□□□□□ -0.3
SDCBP2-201ENST00000339987 ODF3Q96PU9 254 aa13.18□□□□□ -0.3
SDCBP2-201ENST00000339987 TUBA4BQ9H853 241 aa13.18□□□□□ -0.3
SDCBP2-201ENST00000339987 PPP1R14DQ9NXH3 145 aa13.18□□□□□ -0.3
SDCBP2-201ENST00000339987 KLF12Q9Y4X4 402 aa13.18□□□□□ -0.3
SDCBP2-201ENST00000339987 TRBV6-1A0A0K0K1D8 114 aa13.17□□□□□ -0.3
SDCBP2-201ENST00000339987 S100A9P06702 114 aaKnown RBP13.17□□□□□ -0.3
SDCBP2-201ENST00000339987 AMTNQ6UX39 209 aa13.17□□□□□ -0.3
SDCBP2-201ENST00000339987 AGRNO00468 2067 aa13.17□□□□□ -0.3
SDCBP2-201ENST00000339987 TRAV8-1A0A0A6YYK1 113 aa13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 TRBV7-9A0A0J9YWB2 115 aa13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 TMEM218A2RU14 115 aa13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 RBMY1BA6NDE4 496 aaKnown RBP13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 RBMY1EA6NEQ0 496 aaKnown RBP13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 K7EIL1 84 aa13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 IGLV2-11P01706 119 aa13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 PRB2P02812 416 aaPredicted RBP13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 RBMY1DP0C7P1 496 aaKnown RBP13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 CT45A10P0DMU9 189 aa13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 ZNF138P52744 262 aa13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 SRSF3P84103 164 aaKnown RBP13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 TMEM183BQ1AE95 376 aa13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 FMC1Q96HJ9 113 aa13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 ZNF492Q9P255 531 aa13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 LENEPQ9Y5L5 61 aa13.16□□□□□ -0.3
SDCBP2-201ENST00000339987 IGKV3-20P01619 116 aa13.15□□□□□ -0.3
SDCBP2-201ENST00000339987 SRP19P09132 144 aaKnown RBP13.15□□□□□ -0.3
SDCBP2-201ENST00000339987 FLI1Q01543 452 aaPredicted RBP13.15□□□□□ -0.3
SDCBP2-201ENST00000339987 LINC00322Q6ZN03 302 aaPredicted RBP13.15□□□□□ -0.3
SDCBP2-201ENST00000339987 FAM19A4Q96LR4 140 aa13.15□□□□□ -0.3
SDCBP2-201ENST00000339987 LINC00479Q96M42 142 aa13.15□□□□□ -0.3
SDCBP2-201ENST00000339987 PSG8Q9UQ74 426 aa13.15□□□□□ -0.3
SDCBP2-201ENST00000339987 LOC102724200A0A096LPH7 203 aaPredicted RBP13.14□□□□□ -0.31
SDCBP2-201ENST00000339987 TRAV34A0A0B4J273 112 aa13.14□□□□□ -0.31
SDCBP2-201ENST00000339987 F8W036 122 aa13.14□□□□□ -0.31
SDCBP2-201ENST00000339987 SFTA3P0C7M3 94 aa13.14□□□□□ -0.31
SDCBP2-201ENST00000339987 RPL35AP18077 110 aaKnown RBP13.14□□□□□ -0.31
SDCBP2-201ENST00000339987 UBE2G1P62253 170 aa13.14□□□□□ -0.31
SDCBP2-201ENST00000339987 MORN3Q6PF18 240 aaPredicted RBP13.14□□□□□ -0.31
SDCBP2-201ENST00000339987 KIR2DL5BA0A0G2JN68 375 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 KIR2DL5BA0A0G2JPC4 375 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 C9JQL5 133 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 CRISP2P16562 243 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 TAS2R60P59551 318 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 NUTF2P61970 127 aaKnown RBP13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 Q86TA4 180 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 KIR2DL5AQ8N109 375 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 KIR2DL5BQ8NHK3 375 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 Q8TAT8 98 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 SGK494Q96LW2 274 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 SEC11CQ9BY50 192 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 SLC35B3Q9H1N7 401 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 TSPOP30536 169 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 LEPP41159 167 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 RPL35P42766 123 aaKnown RBP13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 PRNTQ86SH4 94 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 DERL1Q9BUN8 251 aa13.13□□□□□ -0.31
SDCBP2-201ENST00000339987 AMBPP02760 352 aa13.12□□□□□ -0.31
SDCBP2-201ENST00000339987 APOC4P55056 127 aa13.12□□□□□ -0.31
SDCBP2-201ENST00000339987 SAPCD1Q5SSQ6 148 aa13.12□□□□□ -0.31
SDCBP2-201ENST00000339987 TVP23CQ96ET8 276 aa13.12□□□□□ -0.31
SDCBP2-201ENST00000339987 NDFIP1Q9BT67 221 aa13.12□□□□□ -0.31
SDCBP2-201ENST00000339987 PARLQ9H300 379 aa13.12□□□□□ -0.31
SDCBP2-201ENST00000339987 ZFP30Q9Y2G7 519 aa13.12□□□□□ -0.31
SDCBP2-201ENST00000339987 LTAP01374 205 aa13.11□□□□□ -0.31
SDCBP2-201ENST00000339987 FRMD6-AS1P0C7T7 363 aa13.11□□□□□ -0.31
SDCBP2-201ENST00000339987 CSTL1Q9H114 145 aa13.11□□□□□ -0.31
SDCBP2-201ENST00000339987 KLLNB2CW77 178 aa13.1□□□□□ -0.31
SDCBP2-201ENST00000339987 APOC3P02656 99 aa13.1□□□□□ -0.31
SDCBP2-201ENST00000339987 GIG44P09565 113 aaPredicted RBP13.1□□□□□ -0.31
SDCBP2-201ENST00000339987 CDKN1BP46527 198 aa13.1□□□□□ -0.31
SDCBP2-201ENST00000339987 SPINK13Q1W4C9 94 aa13.1□□□□□ -0.31
SDCBP2-201ENST00000339987 SVBPQ8N300 66 aa13.1□□□□□ -0.31
SDCBP2-201ENST00000339987 ZFAND2AQ8N6M9 145 aa13.1□□□□□ -0.31
SDCBP2-201ENST00000339987 IGF2BP2-AS1Q96M15 143 aa13.1□□□□□ -0.31
SDCBP2-201ENST00000339987 M0R2Z0 102 aa13.09□□□□□ -0.31
SDCBP2-201ENST00000339987 CEBPGP53567 150 aa13.09□□□□□ -0.31
SDCBP2-201ENST00000339987 SOHLH1Q5JUK2 328 aa13.09□□□□□ -0.31
SDCBP2-201ENST00000339987 COX8CQ7Z4L0 72 aa13.09□□□□□ -0.31
SDCBP2-201ENST00000339987 ASCL2Q99929 193 aa13.09□□□□□ -0.31
SDCBP2-201ENST00000339987 C1QTNF4Q9BXJ3 329 aa13.09□□□□□ -0.31
SDCBP2-201ENST00000339987 CARHSP1Q9Y2V2 147 aaKnown RBP13.09□□□□□ -0.31
SDCBP2-201ENST00000339987 C9JCJ5 164 aa13.08□□□□□ -0.32
SDCBP2-201ENST00000339987 UBE2CO00762 179 aa13.08□□□□□ -0.32
SDCBP2-201ENST00000339987 CRXO43186 299 aaPredicted RBP13.08□□□□□ -0.32
SDCBP2-201ENST00000339987 CA1P00915 261 aaPredicted RBP13.08□□□□□ -0.32
SDCBP2-201ENST00000339987 FXYD7P58549 80 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms