RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 PRR31Q5SQ13 230 aa17.06■□□□□ 0.32
PDLIM2-203ENST00000339162 C18orf65Q6ZTR6 163 aa17.06■□□□□ 0.32
PDLIM2-203ENST00000339162 HIST3H2BBQ8N257 126 aa17.06■□□□□ 0.32
PDLIM2-203ENST00000339162 ARL6IP6Q8N6S5 226 aa17.06■□□□□ 0.32
PDLIM2-203ENST00000339162 A0A1W2PS18 150 aa17.06■□□□□ 0.32
PDLIM2-203ENST00000339162 A8MWL6 223 aa17.06■□□□□ 0.32
PDLIM2-203ENST00000339162 NPIPB6E9PJ23 425 aa17.06■□□□□ 0.32
PDLIM2-203ENST00000339162 SRD5A1P18405 259 aa17.06■□□□□ 0.32
PDLIM2-203ENST00000339162 KLHDC1Q8N7A1 406 aa17.06■□□□□ 0.32
PDLIM2-203ENST00000339162 CT45A10P0DMU9 189 aa17.05■□□□□ 0.32
PDLIM2-203ENST00000339162 FOSL1P15407 271 aa17.05■□□□□ 0.32
PDLIM2-203ENST00000339162 TMEM136Q6ZRR5 245 aa17.05■□□□□ 0.32
PDLIM2-203ENST00000339162 LINC00469Q8N7U9 141 aa17.05■□□□□ 0.32
PDLIM2-203ENST00000339162 MYOZ3Q8TDC0 251 aa17.05■□□□□ 0.32
PDLIM2-203ENST00000339162 C20orf173Q96LM9 149 aa17.05■□□□□ 0.32
PDLIM2-203ENST00000339162 IGHV4OR15-8A0A075B7B6 117 aa17.05■□□□□ 0.32
PDLIM2-203ENST00000339162 A0A087WW49 117 aa17.05■□□□□ 0.32
PDLIM2-203ENST00000339162 LGALS1P09382 135 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-203ENST00000339162 PGLYRP4Q96LB8 373 aa17.05■□□□□ 0.32
PDLIM2-203ENST00000339162 GNB1LQ9BYB4 327 aa17.05■□□□□ 0.32
PDLIM2-203ENST00000339162 SMPXQ9UHP9 88 aa17.05■□□□□ 0.32
PDLIM2-203ENST00000339162 A0A1B0GUS0 222 aa17.04■□□□□ 0.32
PDLIM2-203ENST00000339162 ZNF705DP0CH99 300 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-203ENST00000339162 ZNF705BP0CI00 300 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-203ENST00000339162 Q6ZSV7 163 aa17.04■□□□□ 0.32
PDLIM2-203ENST00000339162 TMEM86BQ8N661 226 aa17.04■□□□□ 0.32
PDLIM2-203ENST00000339162 UBE2E2Q96LR5 201 aa17.04■□□□□ 0.32
PDLIM2-203ENST00000339162 GRIFINA4D1Z8 144 aa17.04■□□□□ 0.32
PDLIM2-203ENST00000339162 DEFB136Q30KP8 78 aa17.04■□□□□ 0.32
PDLIM2-203ENST00000339162 CT83Q5H943 113 aa17.04■□□□□ 0.32
PDLIM2-203ENST00000339162 OR10D4PQ8NGN7 298 aa17.04■□□□□ 0.32
PDLIM2-203ENST00000339162 CAMPP49913 170 aa17.03■□□□□ 0.32
PDLIM2-203ENST00000339162 ZNF80P51504 273 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-203ENST00000339162 SYNJ2BPP57105 145 aa17.03■□□□□ 0.32
PDLIM2-203ENST00000339162 DEFB1P60022 68 aa17.03■□□□□ 0.32
PDLIM2-203ENST00000339162 KIAA1644Q3SXP7 199 aa17.03■□□□□ 0.32
PDLIM2-203ENST00000339162 SAPCD1Q5SSQ6 148 aa17.03■□□□□ 0.32
PDLIM2-203ENST00000339162 ANK3Q12955 4377 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-203ENST00000339162 DNLZQ5SXM8 178 aa17.02■□□□□ 0.32
PDLIM2-203ENST00000339162 GDF5OSQ5U4N7 250 aa17.02■□□□□ 0.32
PDLIM2-203ENST00000339162 AGPAT4-IT1Q9H0P7 198 aa17.02■□□□□ 0.32
PDLIM2-203ENST00000339162 TMSB15BA0A087X1C1 80 aa17.02■□□□□ 0.32
PDLIM2-203ENST00000339162 RNF152Q8N8N0 203 aa17.02■□□□□ 0.32
PDLIM2-203ENST00000339162 SH2D1AO60880 128 aa17.01■□□□□ 0.31
PDLIM2-203ENST00000339162 TCTEX1D4Q5JR98 221 aa17.01■□□□□ 0.31
PDLIM2-203ENST00000339162 OR4B1Q8NGF8 309 aa17.01■□□□□ 0.31
PDLIM2-203ENST00000339162 NRN1Q9NPD7 142 aa17.01■□□□□ 0.31
PDLIM2-203ENST00000339162 OTOGQ6ZRI0 2925 aa17.01■□□□□ 0.31
PDLIM2-203ENST00000339162 TMEM213A2RRL7 107 aa17.01■□□□□ 0.31
PDLIM2-203ENST00000339162 K7EMT4 169 aa17.01■□□□□ 0.31
PDLIM2-203ENST00000339162 WDR73Q6P4I2 378 aa17.01■□□□□ 0.31
PDLIM2-203ENST00000339162 ZNF738Q8NE65 137 aa17.01■□□□□ 0.31
PDLIM2-203ENST00000339162 SOCS3O14543 225 aa17■□□□□ 0.31
PDLIM2-203ENST00000339162 HOXD3P31249 432 aaPredicted RBP17■□□□□ 0.31
PDLIM2-203ENST00000339162 KHDC1LQ5JSQ8 128 aa17■□□□□ 0.31
PDLIM2-203ENST00000339162 SSBP4Q9BWG4 385 aaPredicted RBP17■□□□□ 0.31
PDLIM2-203ENST00000339162 UFC1Q9Y3C8 167 aa17■□□□□ 0.31
PDLIM2-203ENST00000339162 FAM162BQ5T6X4 162 aa17■□□□□ 0.31
PDLIM2-203ENST00000339162 RBAKDNA6NC62 111 aa16.99■□□□□ 0.31
PDLIM2-203ENST00000339162 FBLL1A6NHQ2 334 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-203ENST00000339162 RBPMS2Q6ZRY4 209 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-203ENST00000339162 SLAQ13239 276 aa16.98■□□□□ 0.31
PDLIM2-203ENST00000339162 CDPF1Q6NVV7 123 aa16.98■□□□□ 0.31
PDLIM2-203ENST00000339162 DUX3Q96PT4 197 aa16.98■□□□□ 0.31
PDLIM2-203ENST00000339162 NDFIP1Q9BT67 221 aa16.98■□□□□ 0.31
PDLIM2-203ENST00000339162 TPPP3Q9BW30 176 aa16.98■□□□□ 0.31
PDLIM2-203ENST00000339162 GFRA4Q9GZZ7 299 aa16.98■□□□□ 0.31
PDLIM2-203ENST00000339162 SETD2Q9BYW2 2564 aaPredicted RBP16.98■□□□□ 0.31
PDLIM2-203ENST00000339162 MT-ND6P03923 174 aa16.98■□□□□ 0.31
PDLIM2-203ENST00000339162 FABP4P15090 132 aa16.98■□□□□ 0.31
PDLIM2-203ENST00000339162 TMEM78Q5T7P6 136 aa16.98■□□□□ 0.31
PDLIM2-203ENST00000339162 WFDC3Q8IUB2 231 aa16.98■□□□□ 0.31
PDLIM2-203ENST00000339162 MRPL53Q96EL3 112 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-203ENST00000339162 COX8CQ7Z4L0 72 aa16.97■□□□□ 0.31
PDLIM2-203ENST00000339162 HLA-DQA1P01909 254 aa16.97■□□□□ 0.31
PDLIM2-203ENST00000339162 TMEM256Q8N2U0 113 aa16.97■□□□□ 0.31
PDLIM2-203ENST00000339162 C11orf44Q8N8P7 122 aa16.97■□□□□ 0.31
PDLIM2-203ENST00000339162 WIPF2Q8TF74 440 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-203ENST00000339162 A0A1B0GXF2 115 aa16.96■□□□□ 0.31
PDLIM2-203ENST00000339162 TMEM189A5PLL7 270 aa16.96■□□□□ 0.31
PDLIM2-203ENST00000339162 F6UB75 175 aa16.96■□□□□ 0.31
PDLIM2-203ENST00000339162 SLURP1P55000 103 aa16.96■□□□□ 0.31
PDLIM2-203ENST00000339162 SSTP61278 116 aa16.96■□□□□ 0.31
PDLIM2-203ENST00000339162 COA6Q5JTJ3 125 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-203ENST00000339162 HIVEP2P31629 2446 aa16.96■□□□□ 0.31
PDLIM2-203ENST00000339162 APCSP02743 223 aa16.96■□□□□ 0.3
PDLIM2-203ENST00000339162 CRISP2P16562 243 aa16.96■□□□□ 0.3
PDLIM2-203ENST00000339162 ZNF138P52744 262 aa16.96■□□□□ 0.3
PDLIM2-203ENST00000339162 COX19Q49B96 90 aa16.96■□□□□ 0.3
PDLIM2-203ENST00000339162 FAM231BA6NCW3 169 aa16.95■□□□□ 0.3
PDLIM2-203ENST00000339162 F2Z2F3 143 aa16.95■□□□□ 0.3
PDLIM2-203ENST00000339162 NUPR1O60356 82 aa16.95■□□□□ 0.3
PDLIM2-203ENST00000339162 TFPI2P48307 235 aa16.95■□□□□ 0.3
PDLIM2-203ENST00000339162 HBBP68871 147 aa16.94■□□□□ 0.3
PDLIM2-203ENST00000339162 RASL11AQ6T310 242 aa16.94■□□□□ 0.3
PDLIM2-203ENST00000339162 C9orf47Q6ZRZ4 202 aa16.94■□□□□ 0.3
PDLIM2-203ENST00000339162 ATP5L2Q7Z4Y8 100 aa16.94■□□□□ 0.3
PDLIM2-203ENST00000339162 HIST1H2BLQ99880 126 aa16.94■□□□□ 0.3
PDLIM2-203ENST00000339162 OR11H1Q8NG94 326 aa16.94■□□□□ 0.3
PDLIM2-203ENST00000339162 PACRGQ96M98 296 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms