RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 C1orf194Q5T5A4 169 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 BEX4Q9NWD9 120 aaPredicted RBP4.97□□□□□ -1.61
PRKDC-202ENST00000338368 ATP5LO75964 103 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 IGHV4-39P01824 125 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 CRYGCP07315 174 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 ZNF688P0C7X2 276 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 PSMB11A5LHX3 300 aa4.96□□□□□ -1.61
PRKDC-202ENST00000338368 ZFP36P26651 326 aaKnown RBP4.96□□□□□ -1.61
PRKDC-202ENST00000338368 LAMTOR2Q9Y2Q5 125 aa4.96□□□□□ -1.61
PRKDC-202ENST00000338368 IGLV11-55A0A075B6I3 123 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 RNF182Q8N6D2 247 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 ZMAT4Q9H898 229 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 J3QKU1 62 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 CT83Q5H943 113 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 Q8N9W7 124 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 H3BVH4 76 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 PIP4P2Q8N4L2 257 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 C18orf32Q8TCD1 76 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 OR11H12B2RN74 326 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 C21orf62-AS1Q17RA5 79 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 NPBQ8NG41 125 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 OR11H1Q8NG94 326 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 OR11H2Q8NH07 326 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 TMEM101Q96IK0 257 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 FAM167A-AS1Q96KT0 104 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 VGLL1Q99990 258 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 Q1RN00 199 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 NDUFA3O95167 84 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 TMEM160Q9NX00 188 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 IGHV7-81A0A0B4J1V7 117 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 ZNF664Q8N3J9 261 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 NOTCH2Q04721 2471 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 K7EIM0 57 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 EVI2AP22794 236 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 SRSF1Q07955 248 aaKnown RBP eCLIP4.96□□□□□ -1.623e-6■■■□□ 17.8
PRKDC-202ENST00000338368 DUX3Q96PT4 197 aa4.96□□□□□ -1.62
PRKDC-202ENST00000338368 TRAV9-2A0A087WT02 112 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 AMN1Q8IY45 258 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 SCGB3A1Q96QR1 104 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 TRAV8-6A0A0B4J262 113 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 A8MWP6 167 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 OR5A1Q8NGJ0 315 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 FOXC2Q99958 501 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 TMEM213A2RRL7 107 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.95□□□□□ -1.62
PRKDC-202ENST00000338368 IFI27L1Q96BM0 104 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 SPTBN4Q9H254 2564 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 C10orf105Q8TEF2 133 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 LEPP41159 167 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 DMRTA1Q5VZB9 504 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 FCN3O75636 299 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 PRB1P04280 392 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 SYNJ2BPP57105 145 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 ZNF256Q9Y2P7 627 aaPredicted RBP4.95□□□□□ -1.62
PRKDC-202ENST00000338368 LCNL1Q6ZST4 164 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 C3orf56Q8N813 242 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 FXYD7P58549 80 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 SLAQ13239 276 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 C19orf54Q5BKX5 351 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 LY6G5BQ8NDX9 201 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 LOC102724200A0A096LPH7 203 aaPredicted RBP4.95□□□□□ -1.62
PRKDC-202ENST00000338368 HLA-DMBP28068 263 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 SIRPDQ9H106 197 aa4.95□□□□□ -1.62
PRKDC-202ENST00000338368 TCF21O43680 179 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 CTSGP08311 255 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 PCP4P48539 62 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 LTAP01374 205 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 CACNG7P62955 275 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 DEFB112Q30KQ8 113 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 ANKRD11Q6UB99 2663 aaPredicted RBP4.94□□□□□ -1.62
PRKDC-202ENST00000338368 ZNF503Q96F45 646 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 TNFRSF18Q9Y5U5 241 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 IGHV4-30-2A0A087WSY4 118 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 TRAV12-3A0A0B4J271 114 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 SMIM27A0A1W2PRY6 76 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 ORMDL2Q53FV1 153 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 COA6Q5JTJ3 125 aaKnown RBP4.94□□□□□ -1.62
PRKDC-202ENST00000338368 OR1N2Q8NGR9 330 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 C8orf49Q96NF6 230 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 ST20Q9HBF5 79 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 MRAP2Q96G30 205 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 GP9P14770 177 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 BLCAPP62952 87 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 RAB37Q96AX2 223 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 ZFHX2Q9C0A1 2572 aaPredicted RBP4.94□□□□□ -1.62
PRKDC-202ENST00000338368 C19orf84I3L1E1 186 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 RMI2Q96E14 147 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 KLF12Q9Y4X4 402 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 SMKR1H3BMG3 65 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 SCGB1C2P0DMR2 95 aa4.94□□□□□ -1.62
PRKDC-202ENST00000338368 COX6CP09669 75 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 Q5PR19 223 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 STHQ8IWL8 128 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 FANCD2OSQ96PS1 177 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 ZC2HC1AQ96GY0 325 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 HIST1H4GQ99525 98 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 AGPAT4-IT1Q9H0P7 198 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 WI2-2373I1.2A0A1W2PRP0 233 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 BOD1L2Q8IYS8 172 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 CFHR4Q92496 578 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms