RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 OVOL2Q9BRP0 275 aa8.71□□□□□ -1.02
SPTLC1-202ENST00000337841 SLC35B3Q9H1N7 401 aa8.71□□□□□ -1.02
SPTLC1-202ENST00000337841 EPDR1Q9UM22 224 aa8.71□□□□□ -1.02
SPTLC1-202ENST00000337841 U3KQK5 164 aa8.71□□□□□ -1.02
SPTLC1-202ENST00000337841 IGKV2-40A0A087WW87 121 aaPredicted RBP8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 FAM74A7A6NL05 159 aa8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 F6UZH7 168 aa8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 IGKV2D-40P01614 121 aaPredicted RBP8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 CT45A10P0DMU9 189 aa8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 ZNF138P52744 262 aa8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 IGF2BP2-AS1Q96M15 143 aa8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 ODF3Q96PU9 254 aa8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 RARRES2Q99969 163 aa8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 VGLL1Q99990 258 aa8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 RPH3ALQ9UNE2 315 aa8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 GOLT1BQ9Y3E0 138 aa8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 YTHDF2Q9Y5A9 579 aaKnown RBP8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 ARL2-SNX15V9GYD0 113 aa8.7□□□□□ -1.02
SPTLC1-202ENST00000337841 M0R2Z0 102 aa8.69□□□□□ -1.02
SPTLC1-202ENST00000337841 PAGE4O60829 102 aa8.69□□□□□ -1.02
SPTLC1-202ENST00000337841 TCRAP04437 139 aa8.69□□□□□ -1.02
SPTLC1-202ENST00000337841 CDKN1BP46527 198 aa8.69□□□□□ -1.02
SPTLC1-202ENST00000337841 CCL20P78556 96 aa8.69□□□□□ -1.02
SPTLC1-202ENST00000337841 SPINK13Q1W4C9 94 aa8.69□□□□□ -1.02
SPTLC1-202ENST00000337841 GOLT1AQ6ZVE7 132 aa8.69□□□□□ -1.02
SPTLC1-202ENST00000337841 CSNK1G2-AS1Q8NCQ2 148 aa8.69□□□□□ -1.02
SPTLC1-202ENST00000337841 OR11H2Q8NH07 326 aa8.69□□□□□ -1.02
SPTLC1-202ENST00000337841 RETNQ9HD89 108 aa8.69□□□□□ -1.02
SPTLC1-202ENST00000337841 ZNF492Q9P255 531 aa8.69□□□□□ -1.02
SPTLC1-202ENST00000337841 TRBV7-9A0A0J9YWB2 115 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 FBLL1A6NHQ2 334 aaKnown RBP8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 GGTLC3B5MD39 225 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 INSP01308 110 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 IFNA1P01562 189 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 NMBP08949 121 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 GNG5P63218 68 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 PMS2P11Q13670 270 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 TEX261Q6UWH6 196 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 HIST1H2BAQ96A08 127 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 TCEAL7Q9BRU2 100 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 ATG101Q9BSB4 218 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 TMEM208Q9BTX3 173 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 MANBALQ9NQG1 85 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 GNG13Q9P2W3 67 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 LENEPQ9Y5L5 61 aa8.68□□□□□ -1.02
SPTLC1-202ENST00000337841 GPX1P07203 203 aa8.67□□□□□ -1.02
SPTLC1-202ENST00000337841 TAGLN2P37802 199 aaKnown RBP8.67□□□□□ -1.02
SPTLC1-202ENST00000337841 CYB561D1Q8N8Q1 229 aa8.67□□□□□ -1.02
SPTLC1-202ENST00000337841 ZNF680Q8NEM1 530 aa8.67□□□□□ -1.02
SPTLC1-202ENST00000337841 C20orf144Q9BQM9 153 aa8.67□□□□□ -1.02
SPTLC1-202ENST00000337841 TXNDC17Q9BRA2 123 aa8.67□□□□□ -1.02
SPTLC1-202ENST00000337841 TRAV12-2A0A075B6T6 113 aa8.66□□□□□ -1.02
SPTLC1-202ENST00000337841 IGHV3OR16-12A0A075B7B8 117 aa8.66□□□□□ -1.02
SPTLC1-202ENST00000337841 SMIM9A6NGZ8 99 aa8.66□□□□□ -1.02
SPTLC1-202ENST00000337841 J3KRW8 73 aa8.66□□□□□ -1.02
SPTLC1-202ENST00000337841 PEX7O00628 323 aa8.66□□□□□ -1.02
SPTLC1-202ENST00000337841 CRXO43186 299 aaPredicted RBP8.66□□□□□ -1.02
SPTLC1-202ENST00000337841 CRISP2P16562 243 aa8.66□□□□□ -1.02
SPTLC1-202ENST00000337841 CCDC28AQ8IWP9 274 aa8.66□□□□□ -1.02
SPTLC1-202ENST00000337841 TMEM256Q8N2U0 113 aa8.66□□□□□ -1.02
SPTLC1-202ENST00000337841 FAM19A4Q96LR4 140 aa8.66□□□□□ -1.02
SPTLC1-202ENST00000337841 LINC01587Q99440 93 aa8.66□□□□□ -1.02
SPTLC1-202ENST00000337841 NDFIP1Q9BT67 221 aa8.66□□□□□ -1.02
SPTLC1-202ENST00000337841 PSG8Q9UQ74 426 aa8.66□□□□□ -1.02
SPTLC1-202ENST00000337841 C11orf94C9JXX5 98 aa8.65□□□□□ -1.02
SPTLC1-202ENST00000337841 S100A9P06702 114 aaKnown RBP8.65□□□□□ -1.02
SPTLC1-202ENST00000337841 MIFP14174 115 aa8.65□□□□□ -1.02
SPTLC1-202ENST00000337841 RNASE4P34096 147 aaKnown RBP8.65□□□□□ -1.02
SPTLC1-202ENST00000337841 ATP5G3P48201 142 aa8.65□□□□□ -1.02
SPTLC1-202ENST00000337841 FLI1Q01543 452 aaPredicted RBP8.65□□□□□ -1.02
SPTLC1-202ENST00000337841 SAPCD1Q5SSQ6 148 aa8.65□□□□□ -1.02
SPTLC1-202ENST00000337841 ZNF705AQ6ZN79 300 aaPredicted RBP8.65□□□□□ -1.02
SPTLC1-202ENST00000337841 C1orf158Q8N1D5 194 aa8.65□□□□□ -1.02
SPTLC1-202ENST00000337841 NEU1Q99519 415 aa8.65□□□□□ -1.02
SPTLC1-202ENST00000337841 NIPSNAP3BQ9BS92 247 aa8.65□□□□□ -1.02
SPTLC1-202ENST00000337841 AGRNO00468 2067 aa8.65□□□□□ -1.03
SPTLC1-202ENST00000337841 TRAV8-1A0A0A6YYK1 113 aa8.64□□□□□ -1.03
SPTLC1-202ENST00000337841 TRAV12-3A0A0B4J271 114 aa8.64□□□□□ -1.03
SPTLC1-202ENST00000337841 C7orf71A4D174 169 aa8.64□□□□□ -1.03
SPTLC1-202ENST00000337841 KLLNB2CW77 178 aa8.64□□□□□ -1.03
SPTLC1-202ENST00000337841 UBE2G1P62253 170 aa8.64□□□□□ -1.03
SPTLC1-202ENST00000337841 GFI1BQ5VTD9 330 aa8.64□□□□□ -1.03
SPTLC1-202ENST00000337841 PRNTQ86SH4 94 aa8.64□□□□□ -1.03
SPTLC1-202ENST00000337841 TMEM75Q8N9X5 138 aa8.64□□□□□ -1.03
SPTLC1-202ENST00000337841 Q8TAT8 98 aa8.64□□□□□ -1.03
SPTLC1-202ENST00000337841 SGK494Q96LW2 274 aa8.64□□□□□ -1.03
SPTLC1-202ENST00000337841 TREM1Q9NP99 234 aa8.64□□□□□ -1.03
SPTLC1-202ENST00000337841 VAX2Q9UIW0 290 aa8.64□□□□□ -1.03
SPTLC1-202ENST00000337841 TRAV34A0A0B4J273 112 aa8.63□□□□□ -1.03
SPTLC1-202ENST00000337841 H7BYZ3 331 aa8.63□□□□□ -1.03
SPTLC1-202ENST00000337841 AKR1C3P42330 323 aa8.63□□□□□ -1.03
SPTLC1-202ENST00000337841 TAS2R60P59551 318 aa8.63□□□□□ -1.03
SPTLC1-202ENST00000337841 KIR3DS1Q14943 382 aa8.63□□□□□ -1.03
SPTLC1-202ENST00000337841 RRN3P1Q2M238 152 aa8.63□□□□□ -1.03
SPTLC1-202ENST00000337841 ZFAND2AQ8N6M9 145 aa8.63□□□□□ -1.03
SPTLC1-202ENST00000337841 LYPD6BQ8NI32 183 aa8.63□□□□□ -1.03
SPTLC1-202ENST00000337841 FMC1Q96HJ9 113 aa8.63□□□□□ -1.03
SPTLC1-202ENST00000337841 LINC00479Q96M42 142 aa8.63□□□□□ -1.03
SPTLC1-202ENST00000337841 ZFP30Q9Y2G7 519 aa8.63□□□□□ -1.03
SPTLC1-202ENST00000337841 KLF12Q9Y4X4 402 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms