RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 OBSL1O75147 1896 aa12.9□□□□□ -0.34
NPHP3-201ENST00000337331 A0A0G2JNJ9 132 aa12.9□□□□□ -0.34
NPHP3-201ENST00000337331 TMEM95Q3KNT9 176 aa12.9□□□□□ -0.34
NPHP3-201ENST00000337331 GDF5OSQ5U4N7 250 aa12.9□□□□□ -0.34
NPHP3-201ENST00000337331 CRIP3Q6Q6R5 217 aa12.9□□□□□ -0.34
NPHP3-201ENST00000337331 Q9UFV3 132 aa12.9□□□□□ -0.34
NPHP3-201ENST00000337331 LYZL1Q6UWQ5 148 aa12.9□□□□□ -0.34
NPHP3-201ENST00000337331 Q6ZS92 163 aa12.9□□□□□ -0.35
NPHP3-201ENST00000337331 WDR86Q86TI4 376 aa12.9□□□□□ -0.35
NPHP3-201ENST00000337331 SSBP2P81877 361 aaPredicted RBP12.89□□□□□ -0.35
NPHP3-201ENST00000337331 C9JAW5 83 aa12.89□□□□□ -0.35
NPHP3-201ENST00000337331 NPFFO15130 113 aa12.89□□□□□ -0.35
NPHP3-201ENST00000337331 Q8TAT8 98 aa12.89□□□□□ -0.35
NPHP3-201ENST00000337331 ITLN2Q8WWU7 325 aaPredicted RBP12.89□□□□□ -0.35
NPHP3-201ENST00000337331 TRAV21A0A0B4J279 112 aa12.89□□□□□ -0.35
NPHP3-201ENST00000337331 TMEM8BA6NDV4 472 aa12.89□□□□□ -0.35
NPHP3-201ENST00000337331 YAE1D1Q9NRH1 226 aa12.89□□□□□ -0.35
NPHP3-201ENST00000337331 SPANXB1Q9NS25 103 aaPredicted RBP12.89□□□□□ -0.35
NPHP3-201ENST00000337331 FOXI1Q12951 378 aa12.88□□□□□ -0.35
NPHP3-201ENST00000337331 SIGLEC8Q9NYZ4 499 aa12.88□□□□□ -0.35
NPHP3-201ENST00000337331 DUX3Q96PT4 197 aa12.88□□□□□ -0.35
NPHP3-201ENST00000337331 TRBV25-1A0A075B6N4 114 aa12.88□□□□□ -0.35
NPHP3-201ENST00000337331 TMEM213A2RRL7 107 aa12.88□□□□□ -0.35
NPHP3-201ENST00000337331 C5orf64Q2M2E5 130 aa12.88□□□□□ -0.35
NPHP3-201ENST00000337331 LTAP01374 205 aa12.88□□□□□ -0.35
NPHP3-201ENST00000337331 PAX8Q06710 450 aa12.88□□□□□ -0.35
NPHP3-201ENST00000337331 SRSF1Q07955 248 aaKnown RBP eCLIP12.88□□□□□ -0.35
NPHP3-201ENST00000337331 PTH2Q96A98 100 aa12.88□□□□□ -0.35
NPHP3-201ENST00000337331 SRD5A1P18405 259 aa12.87□□□□□ -0.35
NPHP3-201ENST00000337331 TMEM219Q86XT9 240 aa12.87□□□□□ -0.35
NPHP3-201ENST00000337331 A0A1W2PPI3 338 aa12.87□□□□□ -0.35
NPHP3-201ENST00000337331 COL8A2P25067 703 aa12.87□□□□□ -0.35
NPHP3-201ENST00000337331 LY6DQ14210 128 aa12.87□□□□□ -0.35
NPHP3-201ENST00000337331 UFSP1Q6NVU6 142 aa12.87□□□□□ -0.35
NPHP3-201ENST00000337331 VMO1Q7Z5L0 202 aa12.87□□□□□ -0.35
NPHP3-201ENST00000337331 ZNF688P0C7X2 276 aa12.86□□□□□ -0.35
NPHP3-201ENST00000337331 TMEM158Q8WZ71 300 aa12.86□□□□□ -0.35
NPHP3-201ENST00000337331 SLC25A2Q9BXI2 301 aa12.86□□□□□ -0.35
NPHP3-201ENST00000337331 BUB1B-PAK6H3BSN5 160 aa12.86□□□□□ -0.35
NPHP3-201ENST00000337331 IGFL4Q6B9Z1 124 aa12.86□□□□□ -0.35
NPHP3-201ENST00000337331 EML5Q05BV3 1969 aa12.86□□□□□ -0.35
NPHP3-201ENST00000337331 C2orf91Q6ZV80 131 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 RNF5Q99942 180 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 INSL3P51460 131 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 PRR20EP86478 221 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 PRR20CP86479 221 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 PRR20DP86480 221 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 PRR20BP86481 221 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 PRR20AP86496 221 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 ZNF562Q6V9R5 426 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 NUP37Q8NFH4 326 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 MOB4Q9Y3A3 225 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 FNDC10F2Z333 226 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 TMEM14BQ9NUH8 114 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 SMPXQ9UHP9 88 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 NDUFS7O75251 213 aa12.85□□□□□ -0.35
NPHP3-201ENST00000337331 RNASE1P07998 156 aaKnown RBP12.84□□□□□ -0.35
NPHP3-201ENST00000337331 SP5Q6BEB4 398 aaPredicted RBP12.84□□□□□ -0.35
NPHP3-201ENST00000337331 C2CD3Q4AC94 2353 aa12.84□□□□□ -0.35
NPHP3-201ENST00000337331 C3orf36Q3SXR2 165 aa12.84□□□□□ -0.35
NPHP3-201ENST00000337331 Q6ZUT4 128 aa12.84□□□□□ -0.35
NPHP3-201ENST00000337331 LINC01587Q99440 93 aa12.84□□□□□ -0.35
NPHP3-201ENST00000337331 ORMDL2Q53FV1 153 aa12.84□□□□□ -0.35
NPHP3-201ENST00000337331 DUX4L9Q6RFH8 374 aaPredicted RBP12.84□□□□□ -0.35
NPHP3-201ENST00000337331 SHISA2Q6UWI4 295 aa12.84□□□□□ -0.35
NPHP3-201ENST00000337331 TRAV41A0A0B4J266 112 aa12.83□□□□□ -0.35
NPHP3-201ENST00000337331 OR13C6PQ8NH95 151 aa12.83□□□□□ -0.35
NPHP3-201ENST00000337331 DNAH12Q6ZR08 3092 aa12.83□□□□□ -0.36
NPHP3-201ENST00000337331 TRAV2A0A0B4J234 112 aa12.83□□□□□ -0.36
NPHP3-201ENST00000337331 GFRA4Q9GZZ7 299 aa12.83□□□□□ -0.36
NPHP3-201ENST00000337331 C9orf153Q5TBE3 101 aa12.83□□□□□ -0.36
NPHP3-201ENST00000337331 SIGLEC15Q6ZMC9 328 aa12.83□□□□□ -0.36
NPHP3-201ENST00000337331 DNAL4O96015 105 aa12.82□□□□□ -0.36
NPHP3-201ENST00000337331 TOMM7Q9P0U1 55 aa12.82□□□□□ -0.36
NPHP3-201ENST00000337331 ERG28Q9UKR5 140 aa12.82□□□□□ -0.36
NPHP3-201ENST00000337331 NDPQ00604 133 aa12.82□□□□□ -0.36
NPHP3-201ENST00000337331 GTSF1Q8WW33 167 aa12.82□□□□□ -0.36
NPHP3-201ENST00000337331 DEFB104AQ8WTQ1 72 aa12.82□□□□□ -0.36
NPHP3-201ENST00000337331 COPS9Q8WXC6 57 aa12.82□□□□□ -0.36
NPHP3-201ENST00000337331 IGF2BP2-AS1Q96M15 143 aa12.82□□□□□ -0.36
NPHP3-201ENST00000337331 E7EQL1 145 aa12.81□□□□□ -0.36
NPHP3-201ENST00000337331 SH2D1AO60880 128 aa12.81□□□□□ -0.36
NPHP3-201ENST00000337331 IGLV2-14P01704 120 aa12.81□□□□□ -0.36
NPHP3-201ENST00000337331 CT83Q5H943 113 aa12.81□□□□□ -0.36
NPHP3-201ENST00000337331 MRPL35Q9NZE8 188 aaKnown RBP12.81□□□□□ -0.36
NPHP3-201ENST00000337331 OOSP1A8MZH6 123 aa12.81□□□□□ -0.36
NPHP3-201ENST00000337331 MORN5Q5VZ52 161 aa12.81□□□□□ -0.36
NPHP3-201ENST00000337331 BRD3OSQ6XYD6 125 aa12.81□□□□□ -0.36
NPHP3-201ENST00000337331 IGKV3D-20A0A0C4DH25 116 aa12.8□□□□□ -0.36
NPHP3-201ENST00000337331 OVOL1O14753 267 aa12.8□□□□□ -0.36
NPHP3-201ENST00000337331 ZNF134P52741 427 aa12.8□□□□□ -0.36
NPHP3-201ENST00000337331 EFNA4P52798 201 aa12.8□□□□□ -0.36
NPHP3-201ENST00000337331 MINOS1Q5TGZ0 78 aa12.8□□□□□ -0.36
NPHP3-201ENST00000337331 MINOS1-NBL1R4GNA1 71 aa12.8□□□□□ -0.36
NPHP3-201ENST00000337331 FAM104BQ5XKR9 115 aa12.8□□□□□ -0.36
NPHP3-201ENST00000337331 Q86TA4 180 aa12.8□□□□□ -0.36
NPHP3-201ENST00000337331 IGLV2-8P01709 118 aa12.79□□□□□ -0.36
NPHP3-201ENST00000337331 FAM120AOSQ5T036 256 aa12.79□□□□□ -0.36
NPHP3-201ENST00000337331 LYPD1Q8N2G4 141 aa12.79□□□□□ -0.36
NPHP3-201ENST00000337331 FGF23Q9GZV9 251 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms