RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 ERCC8Q13216 396 aa11.41□□□□□ -0.58
MRPL55-202ENST00000336300 PMS2P11Q13670 270 aa11.41□□□□□ -0.58
MRPL55-202ENST00000336300 ARL6IP6Q8N6S5 226 aa11.41□□□□□ -0.58
MRPL55-202ENST00000336300 AGPAT4-IT1Q9H0P7 198 aa11.41□□□□□ -0.58
MRPL55-202ENST00000336300 IGKV2-40A0A087WW87 121 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-202ENST00000336300 H7BYZ3 331 aa11.4□□□□□ -0.58
MRPL55-202ENST00000336300 IGKV2D-40P01614 121 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-202ENST00000336300 EIF5AL1Q6IS14 154 aaKnown RBP11.4□□□□□ -0.58
MRPL55-202ENST00000336300 STOML3Q8TAV4 291 aa11.4□□□□□ -0.58
MRPL55-202ENST00000336300 NIPSNAP3BQ9BS92 247 aa11.4□□□□□ -0.58
MRPL55-202ENST00000336300 TEX48A0A1B0GUV7 120 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 LOC102723971A0A1B0GUV8 181 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 NUPR2A6NF83 97 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 DIRC3C9JPN6 131 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 J3KRW8 73 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 GPX1P07203 203 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 NMBP08949 121 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 SPART-AS1P0CW21 52 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 HTN1P15515 57 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 ZNF138P52744 262 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 EMP1P54849 157 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 TAS2R60P59551 318 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 NANOS2P60321 138 aaKnown RBP11.39□□□□□ -0.59
MRPL55-202ENST00000336300 SUN5Q8TC36 379 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 VGLL1Q99990 258 aa11.39□□□□□ -0.59
MRPL55-202ENST00000336300 K7EQM0 130 aa11.38□□□□□ -0.59
MRPL55-202ENST00000336300 LGALSLQ3ZCW2 172 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-202ENST00000336300 GFI1BQ5VTD9 330 aa11.38□□□□□ -0.59
MRPL55-202ENST00000336300 CCDC28AQ8IWP9 274 aa11.38□□□□□ -0.59
MRPL55-202ENST00000336300 ZNF492Q9P255 531 aa11.38□□□□□ -0.59
MRPL55-202ENST00000336300 RPH3ALQ9UNE2 315 aa11.38□□□□□ -0.59
MRPL55-202ENST00000336300 KLK5Q9Y337 293 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-202ENST00000336300 TRBV7-9A0A0J9YWB2 115 aa11.37□□□□□ -0.59
MRPL55-202ENST00000336300 SERTM2A0A1B0GWG4 89 aa11.37□□□□□ -0.59
MRPL55-202ENST00000336300 ZNF705GA8MUZ8 300 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-202ENST00000336300 C11orf94C9JXX5 98 aa11.37□□□□□ -0.59
MRPL55-202ENST00000336300 ZNF726P1Q15940 193 aa11.37□□□□□ -0.59
MRPL55-202ENST00000336300 DPPA3Q6W0C5 159 aa11.37□□□□□ -0.59
MRPL55-202ENST00000336300 PHLDA1Q8WV24 401 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-202ENST00000336300 NKX6-2Q9C056 277 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-202ENST00000336300 TRAV12-3A0A0B4J271 114 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 A0A1W2PRE2 83 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 C7orf71A4D174 169 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 MAP1LC3B2A6NCE7 125 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 CRISP2P16562 243 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 RNASE4P34096 147 aaKnown RBP11.36□□□□□ -0.59
MRPL55-202ENST00000336300 SUMO1P63165 101 aaKnown RBP11.36□□□□□ -0.59
MRPL55-202ENST00000336300 ZFP69Q49AA0 526 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 CEMP1Q6PRD7 247 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-202ENST00000336300 ZNF493Q6ZR52 646 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 SSX7Q7RTT5 188 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 C5orf17Q8NAS9 161 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 TMED6Q8WW62 240 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 C16orf74Q96GX8 76 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 FAM19A4Q96LR4 140 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 MAP1LC3BQ9GZQ8 125 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 LENEPQ9Y5L5 61 aa11.36□□□□□ -0.59
MRPL55-202ENST00000336300 KLLNB2CW77 178 aa11.35□□□□□ -0.59
MRPL55-202ENST00000336300 FGF8P55075 233 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-202ENST00000336300 KIR3DS1Q14943 382 aa11.35□□□□□ -0.59
MRPL55-202ENST00000336300 GOLT1AQ6ZVE7 132 aa11.35□□□□□ -0.59
MRPL55-202ENST00000336300 SLC51BQ86UW2 128 aa11.35□□□□□ -0.59
MRPL55-202ENST00000336300 FAM213BQ8TBF2 198 aa11.35□□□□□ -0.59
MRPL55-202ENST00000336300 PYGO2Q9BRQ0 406 aa11.35□□□□□ -0.59
MRPL55-202ENST00000336300 YTHDF2Q9Y5A9 579 aaKnown RBP11.35□□□□□ -0.59
MRPL55-202ENST00000336300 CSMD3Q7Z407 3707 aa11.35□□□□□ -0.59
MRPL55-202ENST00000336300 RAB5CP51148 216 aa11.34□□□□□ -0.59
MRPL55-202ENST00000336300 SFT2D1Q8WV19 159 aa11.34□□□□□ -0.59
MRPL55-202ENST00000336300 TMPRSS5Q9H3S3 457 aa11.34□□□□□ -0.59
MRPL55-202ENST00000336300 EPDR1Q9UM22 224 aa11.34□□□□□ -0.59
MRPL55-202ENST00000336300 TRAV10A0A0B4J240 114 aa11.33□□□□□ -0.6
MRPL55-202ENST00000336300 IFNA7P01567 189 aa11.33□□□□□ -0.6
MRPL55-202ENST00000336300 H2AFB1P0C5Y9 115 aa11.33□□□□□ -0.6
MRPL55-202ENST00000336300 FHITP49789 147 aa11.33□□□□□ -0.6
MRPL55-202ENST00000336300 FAM222AQ5U5X8 452 aa11.33□□□□□ -0.6
MRPL55-202ENST00000336300 Q8TAT8 98 aa11.33□□□□□ -0.6
MRPL55-202ENST00000336300 TMEM263Q8WUH6 116 aaKnown RBP11.33□□□□□ -0.6
MRPL55-202ENST00000336300 NDFIP1Q9BT67 221 aa11.33□□□□□ -0.6
MRPL55-202ENST00000336300 DKK2Q9UBU2 259 aa11.33□□□□□ -0.6
MRPL55-202ENST00000336300 CELA1Q9UNI1 258 aa11.33□□□□□ -0.6
MRPL55-202ENST00000336300 A0A1B0GVG6 124 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 FBLL1A6NHQ2 334 aaKnown RBP11.32□□□□□ -0.6
MRPL55-202ENST00000336300 LYRM9A8MSI8 78 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 TEX46H3BTG2 121 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 TCRAP04437 139 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 PRM2P04554 102 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 AZU1P20160 251 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 UBE2G2P60604 165 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 GNG5P63218 68 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 CD300CQ08708 224 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 BTN1A1Q13410 526 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 C12orf74Q32Q52 190 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 ZFAND2AQ8N6M9 145 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 C2CD4CQ8TF44 421 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 MBD3L1Q8WWY6 194 aa11.32□□□□□ -0.6
MRPL55-202ENST00000336300 TIMM8BQ9Y5J9 83 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-202ENST00000336300 STARD9Q9P2P6 4700 aa11.31□□□□□ -0.6
MRPL55-202ENST00000336300 GGTLC3B5MD39 225 aa11.31□□□□□ -0.6
MRPL55-202ENST00000336300 F6UZH7 168 aa11.31□□□□□ -0.6
MRPL55-202ENST00000336300 RGS13O14921 159 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms