RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 SEC11AP67812 179 aa10.33□□□□□ -0.76
RC3H2-201ENST00000335387 LOXL1Q08397 574 aaPredicted RBP10.33□□□□□ -0.76
RC3H2-201ENST00000335387 DCHS2Q6V1P9 2916 aa10.33□□□□□ -0.76
RC3H2-201ENST00000335387 OR2T8A6NH00 312 aa10.33□□□□□ -0.76
RC3H2-201ENST00000335387 HLA-DRB4P13762 266 aa10.33□□□□□ -0.76
RC3H2-201ENST00000335387 CBY1Q9Y3M2 126 aa10.33□□□□□ -0.76
RC3H2-201ENST00000335387 HLA-DRB4X5D2U9 266 aa10.33□□□□□ -0.76
RC3H2-201ENST00000335387 FABP5P3A8MUU1 101 aa10.32□□□□□ -0.76
RC3H2-201ENST00000335387 TCF21O43680 179 aa10.32□□□□□ -0.76
RC3H2-201ENST00000335387 IL17RELQ6ZVW7 336 aa10.32□□□□□ -0.76
RC3H2-201ENST00000335387 LY6HO94772 140 aa10.32□□□□□ -0.76
RC3H2-201ENST00000335387 GPR183P32249 361 aa10.32□□□□□ -0.76
RC3H2-201ENST00000335387 PTTG1IPP53801 180 aa10.32□□□□□ -0.76
RC3H2-201ENST00000335387 HES1Q14469 280 aa10.32□□□□□ -0.76
RC3H2-201ENST00000335387 ASCL2Q99929 193 aa10.32□□□□□ -0.76
RC3H2-201ENST00000335387 TRBV7-1A0A0A6YYK4 115 aa10.32□□□□□ -0.76
RC3H2-201ENST00000335387 NUDT3O95989 172 aa10.32□□□□□ -0.76
RC3H2-201ENST00000335387 OR9G4Q8NGQ1 327 aa10.32□□□□□ -0.76
RC3H2-201ENST00000335387 CCDC140Q96MF4 163 aa10.32□□□□□ -0.76
RC3H2-201ENST00000335387 POLEQ07864 2286 aa10.32□□□□□ -0.76
RC3H2-201ENST00000335387 IGLV2-18A0A075B6J9 118 aa10.31□□□□□ -0.76
RC3H2-201ENST00000335387 C9orf47Q6ZRZ4 202 aa10.31□□□□□ -0.76
RC3H2-201ENST00000335387 NPYP01303 97 aa10.31□□□□□ -0.76
RC3H2-201ENST00000335387 TRAV8-2A0A0B4J237 113 aa10.3□□□□□ -0.76
RC3H2-201ENST00000335387 CSN3P07498 182 aa10.3□□□□□ -0.76
RC3H2-201ENST00000335387 TP73-AS1Q9UF72 201 aa10.3□□□□□ -0.76
RC3H2-201ENST00000335387 LENEPQ9Y5L5 61 aa10.3□□□□□ -0.76
RC3H2-201ENST00000335387 NCBP2LA6PVI3 153 aaKnown RBP10.3□□□□□ -0.76
RC3H2-201ENST00000335387 SNAI2O43623 268 aa10.3□□□□□ -0.76
RC3H2-201ENST00000335387 NXT2Q9NPJ8 142 aaKnown RBP10.3□□□□□ -0.76
RC3H2-201ENST00000335387 S4R3C0 116 aa10.3□□□□□ -0.76
RC3H2-201ENST00000335387 PKDREJQ9NTG1 2253 aa10.3□□□□□ -0.76
RC3H2-201ENST00000335387 MUC21A0A0G2JKD1 596 aa10.3□□□□□ -0.76
RC3H2-201ENST00000335387 MUC21A0A140T8X8 626 aa10.3□□□□□ -0.76
RC3H2-201ENST00000335387 RBX1P62877 108 aa10.3□□□□□ -0.76
RC3H2-201ENST00000335387 C15orf32Q32M92 178 aa10.3□□□□□ -0.76
RC3H2-201ENST00000335387 MUC21Q5SSG8 566 aa10.3□□□□□ -0.76
RC3H2-201ENST00000335387 CENPVL3A0A0U1RRI6 287 aa10.29□□□□□ -0.76
RC3H2-201ENST00000335387 LMO4P61968 165 aa10.29□□□□□ -0.76
RC3H2-201ENST00000335387 A0A1W2PPR1 153 aa10.29□□□□□ -0.76
RC3H2-201ENST00000335387 NDUFS7O75251 213 aa10.29□□□□□ -0.76
RC3H2-201ENST00000335387 FCER1GP30273 86 aa10.29□□□□□ -0.76
RC3H2-201ENST00000335387 EFNA4P52798 201 aa10.29□□□□□ -0.76
RC3H2-201ENST00000335387 ANKRD39Q53RE8 183 aa10.29□□□□□ -0.76
RC3H2-201ENST00000335387 ADAMTSL5Q6ZMM2 481 aa10.29□□□□□ -0.76
RC3H2-201ENST00000335387 IFI27L1Q96BM0 104 aa10.29□□□□□ -0.76
RC3H2-201ENST00000335387 ATP6V0E1O15342 81 aa10.28□□□□□ -0.76
RC3H2-201ENST00000335387 GOSR1O95249 250 aa10.28□□□□□ -0.76
RC3H2-201ENST00000335387 CKS2P33552 79 aa10.28□□□□□ -0.76
RC3H2-201ENST00000335387 Q6ZVH6 145 aa10.28□□□□□ -0.76
RC3H2-201ENST00000335387 C5orf56Q8N8D9 126 aa10.28□□□□□ -0.76
RC3H2-201ENST00000335387 ITLN2Q8WWU7 325 aaPredicted RBP10.28□□□□□ -0.76
RC3H2-201ENST00000335387 IGHV7-4-1A0A0J9YVY3 117 aa10.28□□□□□ -0.76
RC3H2-201ENST00000335387 SMAD7O15105 426 aaKnown RBP10.28□□□□□ -0.76
RC3H2-201ENST00000335387 TWIST1Q15672 202 aa10.28□□□□□ -0.76
RC3H2-201ENST00000335387 Q8TAT8 98 aa10.28□□□□□ -0.76
RC3H2-201ENST00000335387 MAP1LC3AQ9H492 121 aa10.28□□□□□ -0.76
RC3H2-201ENST00000335387 HIGD1BQ9P298 99 aa10.28□□□□□ -0.76
RC3H2-201ENST00000335387 IGKV3D-20A0A0C4DH25 116 aa10.27□□□□□ -0.76
RC3H2-201ENST00000335387 CBY3A6NI87 242 aa10.27□□□□□ -0.76
RC3H2-201ENST00000335387 FAM223BA6NKX1 122 aa10.27□□□□□ -0.76
RC3H2-201ENST00000335387 CDKN1BP46527 198 aa10.27□□□□□ -0.76
RC3H2-201ENST00000335387 FAM223AQ8IWN6 122 aa10.27□□□□□ -0.76
RC3H2-201ENST00000335387 OR4X2Q8NGF9 303 aa10.27□□□□□ -0.76
RC3H2-201ENST00000335387 EEF1AKMT3Q96AZ1 226 aa10.27□□□□□ -0.76
RC3H2-201ENST00000335387 PRAC2D3DTV9 90 aa10.27□□□□□ -0.77
RC3H2-201ENST00000335387 HLA-DMBP28068 263 aa10.27□□□□□ -0.77
RC3H2-201ENST00000335387 TMEM97Q5BJF2 176 aa10.27□□□□□ -0.77
RC3H2-201ENST00000335387 SMPXQ9UHP9 88 aa10.27□□□□□ -0.77
RC3H2-201ENST00000335387 LY6DQ14210 128 aa10.27□□□□□ -0.77
RC3H2-201ENST00000335387 Q8N8P6 123 aa10.27□□□□□ -0.77
RC3H2-201ENST00000335387 H3BRM9 83 aa10.26□□□□□ -0.77
RC3H2-201ENST00000335387 IGHV3-23P01764 117 aa10.26□□□□□ -0.77
RC3H2-201ENST00000335387 HSD52Q0P140 79 aa10.26□□□□□ -0.77
RC3H2-201ENST00000335387 FOXE3Q13461 319 aa10.26□□□□□ -0.77
RC3H2-201ENST00000335387 APRG1Q8IVJ8 170 aa10.26□□□□□ -0.77
RC3H2-201ENST00000335387 IGSF10Q6WRI0 2623 aa10.26□□□□□ -0.77
RC3H2-201ENST00000335387 CLEC3BP05452 202 aa10.26□□□□□ -0.77
RC3H2-201ENST00000335387 EVI2AP22794 236 aa10.26□□□□□ -0.77
RC3H2-201ENST00000335387 CACNG7P62955 275 aa10.26□□□□□ -0.77
RC3H2-201ENST00000335387 UFSP1Q6NVU6 142 aa10.26□□□□□ -0.77
RC3H2-201ENST00000335387 FAM19A4Q96LR4 140 aa10.26□□□□□ -0.77
RC3H2-201ENST00000335387 MCRIP2Q9BUT9 160 aaKnown RBP10.26□□□□□ -0.77
RC3H2-201ENST00000335387 AGPAT4-IT1Q9H0P7 198 aa10.26□□□□□ -0.77
RC3H2-201ENST00000335387 PEF1Q9UBV8 284 aaKnown RBP10.26□□□□□ -0.77
RC3H2-201ENST00000335387 HHLA3Q9XRX5 114 aa10.26□□□□□ -0.77
RC3H2-201ENST00000335387 ANKHD1Q8IWZ3 2542 aaKnown RBP10.26□□□□□ -0.77
RC3H2-201ENST00000335387 TNFRSF6BO95407 300 aa10.25□□□□□ -0.77
RC3H2-201ENST00000335387 SAA4P35542 130 aa10.25□□□□□ -0.77
RC3H2-201ENST00000335387 ODF1Q14990 250 aa10.25□□□□□ -0.77
RC3H2-201ENST00000335387 NRACQ8N912 160 aa10.25□□□□□ -0.77
RC3H2-201ENST00000335387 TPPP3Q9BW30 176 aa10.25□□□□□ -0.77
RC3H2-201ENST00000335387 C11orf21Q9P2W6 132 aa10.25□□□□□ -0.77
RC3H2-201ENST00000335387 ROS1P08922 2347 aa10.25□□□□□ -0.77
RC3H2-201ENST00000335387 H3BUA1 57 aa10.25□□□□□ -0.77
RC3H2-201ENST00000335387 RNASE8Q8TDE3 154 aaKnown RBP10.25□□□□□ -0.77
RC3H2-201ENST00000335387 GLMPQ8WWB7 406 aa10.25□□□□□ -0.77
RC3H2-201ENST00000335387 ARHGAP32A7KAX9 2087 aa10.25□□□□□ -0.77
RC3H2-201ENST00000335387 PCNX1Q96RV3 2341 aa10.25□□□□□ -0.77
RC3H2-201ENST00000335387 TMSB15BA0A087X1C1 80 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms