RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 HOXB4P17483 251 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-201ENST00000334136 ATP5G2Q06055 141 aa9.39□□□□□ -0.91
HDAC6-201ENST00000334136 GTSF1LQ9H1H1 148 aa9.39□□□□□ -0.91
HDAC6-201ENST00000334136 A0A1B0GV72 72 aa9.39□□□□□ -0.91
HDAC6-201ENST00000334136 KLF17Q5JT82 389 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-201ENST00000334136 SETD2Q9BYW2 2564 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-201ENST00000334136 CENPVL3A0A0U1RRI6 287 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 PSG9Q00887 426 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 GAGE1Q13065 139 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 DIAPH2-AS1Q14236 149 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 OR11H6Q8NGC7 330 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 SAMD5Q5TGI4 173 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 DGAT2L7PQ6IED9 249 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 ZNF833PQ6ZTB9 187 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 RNF125Q96EQ8 232 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 MS4A6AQ9H2W1 248 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 SMKR1H3BMG3 65 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 VWC2Q2TAL6 325 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 DEFB112Q30KQ8 113 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 FAM74A4Q5TZK3 123 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 BCL6BQ8N143 479 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-201ENST00000334136 C8orf46Q8TAG6 207 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 DEFB104AQ8WTQ1 72 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 CCL25O15444 150 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 ARMS2P0C7Q2 107 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 GTSCR1Q86UQ5 136 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 C21orf62Q9NYP8 219 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 SIGLEC9Q9Y336 463 aa9.38□□□□□ -0.91
HDAC6-201ENST00000334136 DLX6P56179 175 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 Q6AWC8 147 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 RASL11AQ6T310 242 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 TMEM167AQ8TBQ9 72 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 KIR3DS1Q14943 382 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 TMEM170BQ5T4T1 132 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 Q6ZPA2 131 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 AMN1Q8IY45 258 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 C11orf44Q8N8P7 122 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 IFI27P40305 119 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-201ENST00000334136 HSD52Q0P140 79 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 FAM120AOSQ5T036 256 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 LYZL1Q6UWQ5 148 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 ZNF329Q86UD4 541 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 Q8TAT8 98 aa9.37□□□□□ -0.91
HDAC6-201ENST00000334136 RNASE8Q8TDE3 154 aaKnown RBP9.37□□□□□ -0.91
HDAC6-201ENST00000334136 IGKV2-40A0A087WW87 121 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-201ENST00000334136 FAM231BA6NCW3 169 aa9.36□□□□□ -0.91
HDAC6-201ENST00000334136 IGKV2D-40P01614 121 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-201ENST00000334136 IGFL4Q6B9Z1 124 aa9.36□□□□□ -0.91
HDAC6-201ENST00000334136 C8orf31Q8N9H6 132 aa9.36□□□□□ -0.91
HDAC6-201ENST00000334136 EEF1AKMT3Q96AZ1 226 aa9.36□□□□□ -0.91
HDAC6-201ENST00000334136 METTL26Q96S19 204 aa9.36□□□□□ -0.91
HDAC6-201ENST00000334136 Q8N7P7 452 aa9.36□□□□□ -0.91
HDAC6-201ENST00000334136 SCGB3A1Q96QR1 104 aa9.36□□□□□ -0.91
HDAC6-201ENST00000334136 CD5LO43866 347 aa9.36□□□□□ -0.91
HDAC6-201ENST00000334136 SLC25A39Q9BZJ4 359 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-201ENST00000334136 TRAV41A0A0B4J266 112 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 ATP5LO75964 103 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 IGHV3-11P01762 117 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 IGHV4-31P0DP07 118 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 ODF3L1Q8IXM7 274 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 OR10J6PQ8NGY7 276 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 ZNF479Q96JC4 524 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 SIRPDQ9H106 197 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 TMEM14BQ9NUH8 114 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 IGKV3-20P01619 116 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 PAX8Q06710 450 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 A0A1B0GW15 77 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 HOXA3O43365 443 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-201ENST00000334136 PAX1P15863 534 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 FAM106AQ4KMX7 169 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 SIGMAR1Q99720 223 aa9.35□□□□□ -0.91
HDAC6-201ENST00000334136 SRSF1Q07955 248 aaKnown RBP eCLIP9.34□□□□□ -0.911e-10■■■□□ 15.3
HDAC6-201ENST00000334136 MBD6Q96DN6 1003 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 CELSR3Q9NYQ7 3312 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 FREM2Q5SZK8 3169 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 FABP5P3A8MUU1 101 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 IGHV4-59P01825 116 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 LY6G5BQ8NDX9 201 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 DYNLRB2Q8TF09 96 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 C11orf1Q9H5F2 150 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 A0A1W2PRX2 142 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 PSMB11A5LHX3 300 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-201ENST00000334136 CNTFRP26992 372 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 OR5A1Q8NGJ0 315 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 IGFBPL1Q8WX77 278 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 C11orf52Q96A22 123 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 IGHV1-24A0A0C4DH33 117 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 DPM2O94777 84 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 PF4P02776 101 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 EBLN2Q6P2I7 272 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 LCNL1Q6ZST4 164 aa9.34□□□□□ -0.91
HDAC6-201ENST00000334136 RHOGP84095 191 aa9.33□□□□□ -0.92
HDAC6-201ENST00000334136 ZC2HC1BQ5TFG8 222 aa9.33□□□□□ -0.92
HDAC6-201ENST00000334136 IGLV1-47P01700 117 aa9.33□□□□□ -0.92
HDAC6-201ENST00000334136 A0A1W2PPI3 338 aa9.33□□□□□ -0.92
HDAC6-201ENST00000334136 CGB3P0DN86 165 aa9.33□□□□□ -0.92
HDAC6-201ENST00000334136 CGB7P0DN87 165 aa9.33□□□□□ -0.92
HDAC6-201ENST00000334136 ZNF562Q6V9R5 426 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms