RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 KAAG1Q9UBP8 84 aa8.66□□□□□ -1.02
SNRNP200-201ENST00000323853 PRIMA1Q86XR5 153 aa8.66□□□□□ -1.02
SNRNP200-201ENST00000323853 LURAP1LQ8IV03 231 aa8.66□□□□□ -1.02
SNRNP200-201ENST00000323853 OR11H6Q8NGC7 330 aa8.66□□□□□ -1.02
SNRNP200-201ENST00000323853 SSC4DQ8WTU2 575 aa8.66□□□□□ -1.02
SNRNP200-201ENST00000323853 RHODO00212 210 aa8.66□□□□□ -1.02
SNRNP200-201ENST00000323853 KNCNA6PVL3 124 aa8.65□□□□□ -1.02
SNRNP200-201ENST00000323853 SHISA9B4DS77 424 aa8.65□□□□□ -1.02
SNRNP200-201ENST00000323853 NPYP01303 97 aa8.65□□□□□ -1.02
SNRNP200-201ENST00000323853 KLF5Q13887 457 aaPredicted RBP8.65□□□□□ -1.02
SNRNP200-201ENST00000323853 SPRNQ5BIV9 151 aa8.65□□□□□ -1.02
SNRNP200-201ENST00000323853 WIPF2Q8TF74 440 aaPredicted RBP8.65□□□□□ -1.02
SNRNP200-201ENST00000323853 LAMTOR3Q9UHA4 124 aa8.65□□□□□ -1.02
SNRNP200-201ENST00000323853 C9JAW5 83 aa8.65□□□□□ -1.02
SNRNP200-201ENST00000323853 AZU1P20160 251 aa8.65□□□□□ -1.02
SNRNP200-201ENST00000323853 PIP4P1Q86T03 277 aa8.65□□□□□ -1.03
SNRNP200-201ENST00000323853 UBE2DNLQ8IWF7 75 aa8.65□□□□□ -1.03
SNRNP200-201ENST00000323853 RNF114Q9Y508 228 aa8.65□□□□□ -1.03
SNRNP200-201ENST00000323853 IGHV3-16A0A0C4DH30 117 aa8.65□□□□□ -1.03
SNRNP200-201ENST00000323853 IGLL1P15814 213 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 HIST1H4AP62805 103 aaKnown RBP8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 TRAV12-2A0A075B6T6 113 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 IGHV7-4-1A0A0J9YVY3 117 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 J3QLI3 93 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 CEND1Q8N111 149 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 XCL2Q9UBD3 114 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 GAGE12JA6NER3 117 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 LHBP01229 141 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 GAGE1Q13065 139 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 GAGE4Q13068 117 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 GAGE5Q13069 117 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 ARHGEF17Q96PE2 2063 aaPredicted RBP8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 GTSF1LQ9H1H1 148 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 HLA-DRB4P13762 266 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 CDKN1BP46527 198 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 OCIAD2Q56VL3 154 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 Q96MF0 132 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 C17orf77Q96MU5 243 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 HLA-DRB4X5D2U9 266 aa8.64□□□□□ -1.03
SNRNP200-201ENST00000323853 CFHR3Q02985 330 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 PYGO2Q9BRQ0 406 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 C1orf122Q6ZSJ8 110 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 ZNF491Q8N8L2 437 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 TRBV25-1A0A075B6N4 114 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 IGLC7A0M8Q6 106 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 DEFB130BP0DP73 79 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 DEFB130AP0DP74 79 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 TCF15Q12870 199 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 MAPK1IP1LQ8NDC0 245 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 H3BUA1 57 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 CTSZQ9UBR2 303 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 K7EP34 96 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 GAGE2AQ6NT46 116 aa8.63□□□□□ -1.03
SNRNP200-201ENST00000323853 RBAKDNA6NC62 111 aa8.62□□□□□ -1.03
SNRNP200-201ENST00000323853 H3BMM0 161 aa8.62□□□□□ -1.03
SNRNP200-201ENST00000323853 UBE2WQ96B02 151 aa8.62□□□□□ -1.03
SNRNP200-201ENST00000323853 SPINK8P0C7L1 97 aa8.62□□□□□ -1.03
SNRNP200-201ENST00000323853 BVES-AS1Q5T3Y7 98 aa8.62□□□□□ -1.03
SNRNP200-201ENST00000323853 CFHR4Q92496 578 aa8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 DNAJC30Q96LL9 226 aa8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 TCTEX1D4Q5JR98 221 aa8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 C20orf78Q9BR46 151 aa8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 SMIM2Q9BVW6 85 aa8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 NDUFS7O75251 213 aa8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 MRPL53Q96EL3 112 aaKnown RBP8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 COL4A3Q01955 1670 aa8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 MPDZO75970 2070 aa8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 SIVA1O15304 175 aa8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 DENND4CQ5VZ89 1909 aa8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 KLF12Q9Y4X4 402 aa8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 DYNAPQ8N1N2 210 aa8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 SRSF2Q01130 221 aaKnown RBP8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 TAL2Q16559 108 aa8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 MRPL35Q9NZE8 188 aaKnown RBP8.61□□□□□ -1.03
SNRNP200-201ENST00000323853 IGHV3-38A0A0C4DH36 116 aa8.6□□□□□ -1.03
SNRNP200-201ENST00000323853 MAJINQ3KP22 176 aa8.6□□□□□ -1.03
SNRNP200-201ENST00000323853 IGFL2Q6UWQ7 119 aa8.6□□□□□ -1.03
SNRNP200-201ENST00000323853 NPBQ8NG41 125 aa8.6□□□□□ -1.03
SNRNP200-201ENST00000323853 TRBV20-1A0A075B6N2 111 aa8.6□□□□□ -1.03
SNRNP200-201ENST00000323853 HLA-DMBP28068 263 aa8.6□□□□□ -1.03
SNRNP200-201ENST00000323853 LYPD6Q86Y78 171 aa8.6□□□□□ -1.03
SNRNP200-201ENST00000323853 SPAG8Q99932 426 aaPredicted RBP8.6□□□□□ -1.03
SNRNP200-201ENST00000323853 PLA2G2EQ9NZK7 142 aa8.6□□□□□ -1.03
SNRNP200-201ENST00000323853 C22orf46C9J442 243 aa8.6□□□□□ -1.03
SNRNP200-201ENST00000323853 F8W1H4 67 aa8.6□□□□□ -1.03
SNRNP200-201ENST00000323853 IGF2BP2-AS1Q96M15 143 aa8.6□□□□□ -1.03
SNRNP200-201ENST00000323853 ZNF625Q96I27 306 aaPredicted RBP8.6□□□□□ -1.03
SNRNP200-201ENST00000323853 NPSP0C0P6 89 aa8.59□□□□□ -1.03
SNRNP200-201ENST00000323853 ZNRF2Q8NHG8 242 aa8.59□□□□□ -1.03
SNRNP200-201ENST00000323853 A0A1W2PPM0 123 aa8.59□□□□□ -1.03
SNRNP200-201ENST00000323853 VWC2LB2RUY7 222 aa8.59□□□□□ -1.03
SNRNP200-201ENST00000323853 RITA1Q96K30 269 aa8.59□□□□□ -1.03
SNRNP200-201ENST00000323853 DKK2Q9UBU2 259 aa8.59□□□□□ -1.03
SNRNP200-201ENST00000323853 EGR2P11161 476 aaPredicted RBP8.59□□□□□ -1.03
SNRNP200-201ENST00000323853 PRSS33Q8NF86 280 aa8.59□□□□□ -1.03
SNRNP200-201ENST00000323853 TMEM243Q9BU79 118 aa8.59□□□□□ -1.03
SNRNP200-201ENST00000323853 KIF26AQ9ULI4 1882 aaPredicted RBP8.59□□□□□ -1.03
SNRNP200-201ENST00000323853 ZNF106Q9H2Y7 1883 aaKnown RBP8.59□□□□□ -1.04
SNRNP200-201ENST00000323853 GAGE7O76087 117 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms