RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PRR20BP86481 221 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 PRR20AP86496 221 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 CHAC1Q9BUX1 264 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 FAM90A9PA6NNJ1 464 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 IGKCP01834 107 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 KMT2EQ8IZD2 1858 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 WDFY3Q8IZQ1 3526 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 ANAPC13Q9BS18 74 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 K7EP34 96 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 DPM2O94777 84 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 LINC00310P59036 64 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 C15orf32Q32M92 178 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 TRAV8-2A0A0B4J237 113 aa12.17□□□□□ -0.46
VARS2-201ENST00000321897 TRAV40A0A0B4J280 105 aa12.17□□□□□ -0.46
VARS2-201ENST00000321897 PRTN3P24158 256 aa12.17□□□□□ -0.46
VARS2-201ENST00000321897 EMP1P54849 157 aa12.17□□□□□ -0.46
VARS2-201ENST00000321897 FASNP49327 2511 aaKnown RBP12.17□□□□□ -0.46
VARS2-201ENST00000321897 C8orf46Q8TAG6 207 aa12.17□□□□□ -0.46
VARS2-201ENST00000321897 SCGB3A1Q96QR1 104 aa12.17□□□□□ -0.46
VARS2-201ENST00000321897 ACANP16112 2415 aa12.17□□□□□ -0.46
VARS2-201ENST00000321897 H3BRM9 83 aa12.17□□□□□ -0.46
VARS2-201ENST00000321897 PRSS33Q8NF86 280 aa12.17□□□□□ -0.46
VARS2-201ENST00000321897 DKK2Q9UBU2 259 aa12.17□□□□□ -0.46
VARS2-201ENST00000321897 ATP5IP56385 69 aaPredicted RBP12.16□□□□□ -0.46
VARS2-201ENST00000321897 TMEM30BQ3MIR4 351 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 VMO1Q7Z5L0 202 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 C11orf44Q8N8P7 122 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 DSCAMO60469 2012 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 G3V318 75 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 THBDP07204 575 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 RAB9AP51151 201 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 TMEM155Q4W5P6 130 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 IGHV3OR16-12A0A075B7B8 117 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 DLX6P56179 175 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 A0A1W2PPM0 123 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 SPRY2O43597 315 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 SPINK8P0C7L1 97 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 CD300EQ496F6 205 aaPredicted RBP12.16□□□□□ -0.46
VARS2-201ENST00000321897 BPESC1Q9GZL8 116 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 C7orf69Q9H7B7 122 aa12.16□□□□□ -0.46
VARS2-201ENST00000321897 TOMM40O96008 361 aa12.15□□□□□ -0.46
VARS2-201ENST00000321897 ANXA2RQ3ZCQ2 193 aa12.15□□□□□ -0.46
VARS2-201ENST00000321897 Q86TA4 180 aa12.15□□□□□ -0.46
VARS2-201ENST00000321897 TMEM75Q8N9X5 138 aa12.15□□□□□ -0.46
VARS2-201ENST00000321897 TMEM158Q8WZ71 300 aa12.15□□□□□ -0.46
VARS2-201ENST00000321897 CTRLP40313 264 aa12.15□□□□□ -0.47
VARS2-201ENST00000321897 UCNP55089 124 aa12.15□□□□□ -0.47
VARS2-201ENST00000321897 PHLDA3Q9Y5J5 127 aa12.15□□□□□ -0.47
VARS2-201ENST00000321897 RNF182Q8N6D2 247 aa12.14□□□□□ -0.47
VARS2-201ENST00000321897 NUP37Q8NFH4 326 aa12.14□□□□□ -0.47
VARS2-201ENST00000321897 GAGE12HA6NDE8 117 aa12.14□□□□□ -0.47
VARS2-201ENST00000321897 C22orf46C9J442 243 aa12.14□□□□□ -0.47
VARS2-201ENST00000321897 C2orf70A6NJV1 201 aa12.14□□□□□ -0.47
VARS2-201ENST00000321897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.14□□□□□ -0.47
VARS2-201ENST00000321897 SNCGO76070 127 aa12.14□□□□□ -0.47
VARS2-201ENST00000321897 GATA4P43694 442 aa12.14□□□□□ -0.47
VARS2-201ENST00000321897 ERCC8Q13216 396 aa12.14□□□□□ -0.47
VARS2-201ENST00000321897 ATP5LO75964 103 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 IGLC1P0CG04 106 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 HLA-DMBP28068 263 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 ATP5G2Q06055 141 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 GDF5OSQ5U4N7 250 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 PGPEP1Q9NXJ5 209 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 IGHV3-64A0A075B6Q5 118 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 HOXA3O43365 443 aaPredicted RBP12.13□□□□□ -0.47
VARS2-201ENST00000321897 TCF15Q12870 199 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 RUSC1-AS1Q66K80 236 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 ZNF747Q9BV97 191 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 GEMIN7Q9H840 131 aaKnown RBP12.13□□□□□ -0.47
VARS2-201ENST00000321897 ZNF815PA8K554 130 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 C5orf64Q2M2E5 130 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 C3orf36Q3SXR2 165 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 C8orf49Q96NF6 230 aa12.13□□□□□ -0.47
VARS2-201ENST00000321897 SIGLEC8Q9NYZ4 499 aa12.12□□□□□ -0.47
VARS2-201ENST00000321897 GNLYP22749 145 aa12.12□□□□□ -0.47
VARS2-201ENST00000321897 Q6AWC8 147 aa12.12□□□□□ -0.47
VARS2-201ENST00000321897 LHBP01229 141 aa12.11□□□□□ -0.47
VARS2-201ENST00000321897 ZNF833PQ6ZTB9 187 aa12.11□□□□□ -0.47
VARS2-201ENST00000321897 FAM120AOSQ5T036 256 aa12.11□□□□□ -0.47
VARS2-201ENST00000321897 TEX29Q8N6K0 151 aa12.11□□□□□ -0.47
VARS2-201ENST00000321897 OR10J6PQ8NGY7 276 aa12.11□□□□□ -0.47
VARS2-201ENST00000321897 FXYD5Q96DB9 178 aa12.11□□□□□ -0.47
VARS2-201ENST00000321897 LOC400499M0QZD8 3231 aa12.11□□□□□ -0.47
VARS2-201ENST00000321897 SH2D1AO60880 128 aa12.11□□□□□ -0.47
VARS2-201ENST00000321897 RPS20P60866 119 aaKnown RBP12.11□□□□□ -0.47
VARS2-201ENST00000321897 WFDC2Q14508 124 aa12.11□□□□□ -0.47
VARS2-201ENST00000321897 SYT8Q8NBV8 401 aa12.11□□□□□ -0.47
VARS2-201ENST00000321897 FAM231DQ6ZW35 169 aa12.11□□□□□ -0.47
VARS2-201ENST00000321897 SPATA12Q7Z6I5 190 aa12.11□□□□□ -0.47
VARS2-201ENST00000321897 IGHV4-39P01824 125 aa12.1□□□□□ -0.47
VARS2-201ENST00000321897 IGFL3Q6UXB1 125 aa12.1□□□□□ -0.47
VARS2-201ENST00000321897 TMEM8BA6NDV4 472 aa12.1□□□□□ -0.47
VARS2-201ENST00000321897 PATE2Q6UY27 113 aa12.1□□□□□ -0.47
VARS2-201ENST00000321897 NPYP01303 97 aa12.1□□□□□ -0.47
VARS2-201ENST00000321897 GTSF1Q8WW33 167 aa12.1□□□□□ -0.47
VARS2-201ENST00000321897 HAX1O00165 279 aa12.09□□□□□ -0.47
VARS2-201ENST00000321897 LGALS3P17931 250 aaKnown RBP12.09□□□□□ -0.47
VARS2-201ENST00000321897 SAA4P35542 130 aa12.09□□□□□ -0.47
VARS2-201ENST00000321897 DDB2Q92466 427 aa12.09□□□□□ -0.47
VARS2-201ENST00000321897 ATP6V0BQ99437 205 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms