RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 NHP2Q9NX24 153 aaKnown RBP12.6□□□□□ -0.39
CRAT-201ENST00000318080 C16orf97H3BN30 126 aa12.6□□□□□ -0.39
CRAT-201ENST00000318080 IGKV1-17P01599 117 aa12.6□□□□□ -0.39
CRAT-201ENST00000318080 ATP5G2Q06055 141 aa12.6□□□□□ -0.39
CRAT-201ENST00000318080 ARPC1AQ92747 370 aa12.6□□□□□ -0.39
CRAT-201ENST00000318080 CRYGBP07316 175 aa12.59□□□□□ -0.39
CRAT-201ENST00000318080 C3orf36Q3SXR2 165 aa12.59□□□□□ -0.39
CRAT-201ENST00000318080 LYZL1Q6UWQ5 148 aa12.59□□□□□ -0.39
CRAT-201ENST00000318080 PRELID3AQ96N28 172 aa12.59□□□□□ -0.39
CRAT-201ENST00000318080 UTP20O75691 2785 aaKnown RBP12.59□□□□□ -0.39
CRAT-201ENST00000318080 PF4V1P10720 104 aa12.59□□□□□ -0.39
CRAT-201ENST00000318080 HOXB4P17483 251 aaPredicted RBP12.59□□□□□ -0.39
CRAT-201ENST00000318080 TMEM155Q4W5P6 130 aa12.59□□□□□ -0.39
CRAT-201ENST00000318080 PPIFP30405 207 aaKnown RBP12.58□□□□□ -0.39
CRAT-201ENST00000318080 ETDBQ3ZM63 59 aa12.58□□□□□ -0.39
CRAT-201ENST00000318080 NUP37Q8NFH4 326 aa12.58□□□□□ -0.39
CRAT-201ENST00000318080 NPYP01303 97 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 THBDP07204 575 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 SMIM13P0DJ93 91 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 CDSNQ15517 529 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 GTSCR1Q86UQ5 136 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 IFI27L1Q96BM0 104 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 WNK2Q9Y3S1 2297 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 LYNX1G3V0Z9 82 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 H3BMG7 143 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 I3L2K1 104 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 NDUFS7O75251 213 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 LYNX1P0DP58 116 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 HERV-K104P63124 156 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 RIGQ13278 110 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 KLF17Q5JT82 389 aaPredicted RBP12.58□□□□□ -0.4
CRAT-201ENST00000318080 PPP1R27Q86WC6 154 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 PSG8Q9UQ74 426 aa12.58□□□□□ -0.4
CRAT-201ENST00000318080 TRBV19A0A075B6N1 114 aa12.57□□□□□ -0.4
CRAT-201ENST00000318080 CD300EQ496F6 205 aaPredicted RBP12.57□□□□□ -0.4
CRAT-201ENST00000318080 RASL11BQ9BPW5 248 aa12.57□□□□□ -0.4
CRAT-201ENST00000318080 COX7A1P24310 79 aa12.57□□□□□ -0.4
CRAT-201ENST00000318080 SIGLEC15Q6ZMC9 328 aa12.57□□□□□ -0.4
CRAT-201ENST00000318080 NGBQ9NPG2 151 aa12.57□□□□□ -0.4
CRAT-201ENST00000318080 MSRB1Q9NZV6 116 aa12.57□□□□□ -0.4
CRAT-201ENST00000318080 MYO18BQ8IUG5 2567 aa12.56□□□□□ -0.4
CRAT-201ENST00000318080 OR5A1Q8NGJ0 315 aa12.56□□□□□ -0.4
CRAT-201ENST00000318080 RALYQ9UKM9 306 aaKnown RBP12.56□□□□□ -0.4
CRAT-201ENST00000318080 IGHV1-3A0A0C4DH29 117 aa12.56□□□□□ -0.4
CRAT-201ENST00000318080 SMIM17P0DL12 118 aa12.56□□□□□ -0.4
CRAT-201ENST00000318080 EVI2AP22794 236 aa12.56□□□□□ -0.4
CRAT-201ENST00000318080 MRPL51Q4U2R6 128 aaKnown RBP12.56□□□□□ -0.4
CRAT-201ENST00000318080 ZNF462Q96JM2 2506 aa12.55□□□□□ -0.4
CRAT-201ENST00000318080 ASH1LQ9NR48 2969 aaKnown RBP12.55□□□□□ -0.4
CRAT-201ENST00000318080 B9A039 149 aa12.55□□□□□ -0.4
CRAT-201ENST00000318080 GATA1P15976 413 aaPredicted RBP12.55□□□□□ -0.4
CRAT-201ENST00000318080 LGALS9BQ3B8N2 356 aa12.55□□□□□ -0.4
CRAT-201ENST00000318080 IGFL4Q6B9Z1 124 aa12.55□□□□□ -0.4
CRAT-201ENST00000318080 LGALS9CQ6DKI2 356 aa12.55□□□□□ -0.4
CRAT-201ENST00000318080 TMEM14CQ9P0S9 112 aa12.55□□□□□ -0.4
CRAT-201ENST00000318080 ABCA4P78363 2273 aa12.55□□□□□ -0.4
CRAT-201ENST00000318080 ARHGAP32A7KAX9 2087 aa12.55□□□□□ -0.4
CRAT-201ENST00000318080 SFTA2Q6UW10 78 aa12.55□□□□□ -0.4
CRAT-201ENST00000318080 C8orf31Q8N9H6 132 aa12.55□□□□□ -0.4
CRAT-201ENST00000318080 HRNRQ86YZ3 2850 aaPredicted RBP12.55□□□□□ -0.4
CRAT-201ENST00000318080 WI2-2373I1.2A0A1W2PRP0 233 aa12.54□□□□□ -0.4
CRAT-201ENST00000318080 GRNP28799 593 aaKnown RBP12.54□□□□□ -0.4
CRAT-201ENST00000318080 TMEM75Q8N9X5 138 aa12.54□□□□□ -0.4
CRAT-201ENST00000318080 OR9G4Q8NGQ1 327 aa12.54□□□□□ -0.4
CRAT-201ENST00000318080 MRAP2Q96G30 205 aa12.54□□□□□ -0.4
CRAT-201ENST00000318080 SPAG8Q99932 426 aaPredicted RBP12.54□□□□□ -0.4
CRAT-201ENST00000318080 ANKHD1Q8IWZ3 2542 aaKnown RBP12.54□□□□□ -0.4
CRAT-201ENST00000318080 OR4X2Q8NGF9 303 aa12.54□□□□□ -0.4
CRAT-201ENST00000318080 CHAC1Q9BUX1 264 aa12.54□□□□□ -0.4
CRAT-201ENST00000318080 CHD6Q8TD26 2715 aa12.54□□□□□ -0.4
CRAT-201ENST00000318080 K7EIM0 57 aa12.53□□□□□ -0.4
CRAT-201ENST00000318080 IGLV1-47P01700 117 aa12.53□□□□□ -0.4
CRAT-201ENST00000318080 HBDP02042 147 aa12.53□□□□□ -0.4
CRAT-201ENST00000318080 PRB1P04280 392 aa12.53□□□□□ -0.4
CRAT-201ENST00000318080 VGLL1Q99990 258 aa12.53□□□□□ -0.4
CRAT-201ENST00000318080 SHANK2-AS3Q9BTD1 123 aa12.53□□□□□ -0.4
CRAT-201ENST00000318080 CCL21O00585 134 aa12.53□□□□□ -0.4
CRAT-201ENST00000318080 BRI3O95415 125 aa12.53□□□□□ -0.4
CRAT-201ENST00000318080 IL4P05112 153 aa12.53□□□□□ -0.4
CRAT-201ENST00000318080 FCER1GP30273 86 aa12.53□□□□□ -0.4
CRAT-201ENST00000318080 TCTEX1D4Q5JR98 221 aa12.53□□□□□ -0.4
CRAT-201ENST00000318080 RNASE6Q93091 150 aaKnown RBP12.53□□□□□ -0.4
CRAT-201ENST00000318080 SPANXB1Q9NS25 103 aaPredicted RBP12.53□□□□□ -0.4
CRAT-201ENST00000318080 CKS2P33552 79 aa12.52□□□□□ -0.4
CRAT-201ENST00000318080 PLGLAQ15195 96 aa12.52□□□□□ -0.4
CRAT-201ENST00000318080 ZNF491Q8N8L2 437 aa12.52□□□□□ -0.4
CRAT-201ENST00000318080 USP9XQ93008 2570 aaPredicted RBP12.52□□□□□ -0.4
CRAT-201ENST00000318080 FAM90A27PA6NNH2 459 aa12.52□□□□□ -0.41
CRAT-201ENST00000318080 BUB1B-PAK6H3BSN5 160 aa12.52□□□□□ -0.41
CRAT-201ENST00000318080 Q8TAT8 98 aa12.52□□□□□ -0.41
CRAT-201ENST00000318080 TMEM8BA6NDV4 472 aa12.52□□□□□ -0.41
CRAT-201ENST00000318080 H3BRN7 92 aa12.52□□□□□ -0.41
CRAT-201ENST00000318080 TSPAN13O95857 204 aa12.52□□□□□ -0.41
CRAT-201ENST00000318080 PRSS1P07477 247 aa12.52□□□□□ -0.41
CRAT-201ENST00000318080 FAM104BQ5XKR9 115 aa12.52□□□□□ -0.41
CRAT-201ENST00000318080 CRYBG3Q68DQ2 2970 aa12.52□□□□□ -0.41
CRAT-201ENST00000318080 ORMDL3Q8N138 153 aa12.52□□□□□ -0.41
CRAT-201ENST00000318080 MAPKAPK5-AS1Q8N8E1 139 aa12.52□□□□□ -0.41
CRAT-201ENST00000318080 MRPS12O15235 138 aaKnown RBP12.51□□□□□ -0.41
CRAT-201ENST00000318080 CNIH1O95406 144 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms