RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ODF1Q14990 250 aa14.81□□□□□ -0.04
RTN4-201ENST00000317610 VKORC1Q9BQB6 163 aa14.81□□□□□ -0.04
RTN4-201ENST00000317610 CSTL1Q9H114 145 aa14.81□□□□□ -0.04
RTN4-201ENST00000317610 HIGD1BQ9P298 99 aa14.81□□□□□ -0.04
RTN4-201ENST00000317610 S100A7P31151 101 aa14.81□□□□□ -0.04
RTN4-201ENST00000317610 LINC01560Q8TB33 94 aa14.81□□□□□ -0.04
RTN4-201ENST00000317610 HHLA3Q9XRX5 114 aa14.81□□□□□ -0.04
RTN4-201ENST00000317610 MAP1BP46821 2468 aaKnown RBP14.8□□□□□ -0.04
RTN4-201ENST00000317610 SAP30O75446 220 aa14.8□□□□□ -0.04
RTN4-201ENST00000317610 ORM1P02763 201 aa14.8□□□□□ -0.04
RTN4-201ENST00000317610 IGFL4Q6B9Z1 124 aa14.8□□□□□ -0.04
RTN4-201ENST00000317610 WFDC3Q8IUB2 231 aa14.8□□□□□ -0.04
RTN4-201ENST00000317610 MEGF9Q9H1U4 602 aa14.8□□□□□ -0.04
RTN4-201ENST00000317610 A0A1W2PPM0 123 aa14.8□□□□□ -0.04
RTN4-201ENST00000317610 GAS8-AS1O95177 125 aa14.8□□□□□ -0.04
RTN4-201ENST00000317610 TNFRSF6BO95407 300 aa14.8□□□□□ -0.04
RTN4-201ENST00000317610 LEPP41159 167 aa14.8□□□□□ -0.04
RTN4-201ENST00000317610 EBI3Q14213 229 aa14.8□□□□□ -0.04
RTN4-201ENST00000317610 ZNF318Q5VUA4 2279 aa14.79□□□□□ -0.04
RTN4-201ENST00000317610 CCDC144NLQ6NUI1 221 aa14.79□□□□□ -0.04
RTN4-201ENST00000317610 NEGR1Q7Z3B1 354 aa14.79□□□□□ -0.04
RTN4-201ENST00000317610 DYNAPQ8N1N2 210 aa14.79□□□□□ -0.04
RTN4-201ENST00000317610 OR5A1Q8NGJ0 315 aa14.79□□□□□ -0.04
RTN4-201ENST00000317610 C18orf15Q96N68 181 aa14.79□□□□□ -0.04
RTN4-201ENST00000317610 RBAKDNA6NC62 111 aa14.78□□□□□ -0.04
RTN4-201ENST00000317610 ANKRD11Q6UB99 2663 aaPredicted RBP14.78□□□□□ -0.04
RTN4-201ENST00000317610 OOSP1A8MZH6 123 aa14.78□□□□□ -0.04
RTN4-201ENST00000317610 NAA38Q9BRA0 125 aaKnown RBP14.78□□□□□ -0.04
RTN4-201ENST00000317610 IGKV2D-26A0A0A0MRZ7 120 aa14.77□□□□□ -0.04
RTN4-201ENST00000317610 NCBP2LA6PVI3 153 aaKnown RBP14.77□□□□□ -0.04
RTN4-201ENST00000317610 EVI2AP22794 236 aa14.77□□□□□ -0.04
RTN4-201ENST00000317610 AKAP13Q12802 2813 aa14.77□□□□□ -0.04
RTN4-201ENST00000317610 ARHGAP32A7KAX9 2087 aa14.77□□□□□ -0.04
RTN4-201ENST00000317610 G3V4G9 280 aa14.77□□□□□ -0.05
RTN4-201ENST00000317610 ERCC8Q13216 396 aa14.77□□□□□ -0.05
RTN4-201ENST00000317610 RAB37Q96AX2 223 aa14.77□□□□□ -0.05
RTN4-201ENST00000317610 SMPXQ9UHP9 88 aa14.77□□□□□ -0.05
RTN4-201ENST00000317610 DCHS1Q96JQ0 3298 aa14.77□□□□□ -0.05
RTN4-201ENST00000317610 IGLV2-18A0A075B6J9 118 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 PRAC2D3DTV9 90 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 Q8N8P6 123 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 TIMD4Q96H15 378 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 IGHV7-81A0A0B4J1V7 117 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 HLA-DRB4P13762 266 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 RAB9AP51151 201 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 KLK9Q2XQG4 91 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 FBXL19-AS1Q494R0 122 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 VMO1Q7Z5L0 202 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 KLK9Q9UKQ9 250 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 SPCS1Q9Y6A9 102 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 HLA-DRB4X5D2U9 266 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 ACACAQ13085 2346 aa14.76□□□□□ -0.05
RTN4-201ENST00000317610 ATP5LO75964 103 aa14.75□□□□□ -0.05
RTN4-201ENST00000317610 LY6HO94772 140 aa14.75□□□□□ -0.05
RTN4-201ENST00000317610 IGKCP01834 107 aa14.75□□□□□ -0.05
RTN4-201ENST00000317610 C1orf122Q6ZSJ8 110 aa14.75□□□□□ -0.05
RTN4-201ENST00000317610 ZFAND3Q9H8U3 227 aa14.75□□□□□ -0.05
RTN4-201ENST00000317610 PRSS47A8MTI9 375 aa14.75□□□□□ -0.05
RTN4-201ENST00000317610 SMIM13P0DJ93 91 aa14.75□□□□□ -0.05
RTN4-201ENST00000317610 DTX2Q86UW9 622 aa14.75□□□□□ -0.05
RTN4-201ENST00000317610 TPRP12270 2363 aaKnown RBP14.74□□□□□ -0.05
RTN4-201ENST00000317610 BUB3O43684 328 aa14.74□□□□□ -0.05
RTN4-201ENST00000317610 MINOS1Q5TGZ0 78 aa14.74□□□□□ -0.05
RTN4-201ENST00000317610 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.74□□□□□ -0.05
RTN4-201ENST00000317610 ZNF502Q8TBZ5 544 aa14.74□□□□□ -0.05
RTN4-201ENST00000317610 MINOS1-NBL1R4GNA1 71 aa14.74□□□□□ -0.05
RTN4-201ENST00000317610 IGKV3D-20A0A0C4DH25 116 aa14.74□□□□□ -0.05
RTN4-201ENST00000317610 PRSS1P07477 247 aa14.74□□□□□ -0.05
RTN4-201ENST00000317610 FABP2P12104 132 aa14.74□□□□□ -0.05
RTN4-201ENST00000317610 GATA1P15976 413 aaPredicted RBP14.74□□□□□ -0.05
RTN4-201ENST00000317610 IL17RELQ6ZVW7 336 aa14.74□□□□□ -0.05
RTN4-201ENST00000317610 TMEM158Q8WZ71 300 aa14.74□□□□□ -0.05
RTN4-201ENST00000317610 SLC50A1Q9BRV3 221 aa14.74□□□□□ -0.05
RTN4-201ENST00000317610 CHAC1Q9BUX1 264 aa14.74□□□□□ -0.05
RTN4-201ENST00000317610 TMEM11P17152 192 aa14.73□□□□□ -0.05
RTN4-201ENST00000317610 FXYD2P54710 66 aa14.73□□□□□ -0.05
RTN4-201ENST00000317610 DPM2O94777 84 aa14.72□□□□□ -0.05
RTN4-201ENST00000317610 GRNP28799 593 aaKnown RBP14.72□□□□□ -0.05
RTN4-201ENST00000317610 SAMD5Q5TGI4 173 aa14.72□□□□□ -0.05
RTN4-201ENST00000317610 FAM110DQ8TAY7 271 aaPredicted RBP14.72□□□□□ -0.05
RTN4-201ENST00000317610 IGHV3OR16-8A0A075B7F1 116 aa14.72□□□□□ -0.05
RTN4-201ENST00000317610 Q8N9W7 124 aa14.72□□□□□ -0.05
RTN4-201ENST00000317610 FOXC2Q99958 501 aa14.72□□□□□ -0.05
RTN4-201ENST00000317610 ATMQ13315 3056 aa14.72□□□□□ -0.05
RTN4-201ENST00000317610 GCSHP23434 173 aa14.71□□□□□ -0.05
RTN4-201ENST00000317610 PPIFP30405 207 aaKnown RBP14.71□□□□□ -0.05
RTN4-201ENST00000317610 PHLDA1Q8WV24 401 aaPredicted RBP14.71□□□□□ -0.05
RTN4-201ENST00000317610 C11orf21Q9P2W6 132 aa14.71□□□□□ -0.05
RTN4-201ENST00000317610 TRBV25-1A0A075B6N4 114 aa14.71□□□□□ -0.05
RTN4-201ENST00000317610 FAM90A27PA6NNH2 459 aa14.71□□□□□ -0.05
RTN4-201ENST00000317610 TM4SF20Q53R12 229 aa14.71□□□□□ -0.05
RTN4-201ENST00000317610 RNF182Q8N6D2 247 aa14.71□□□□□ -0.05
RTN4-201ENST00000317610 TM2D2Q9BX73 214 aa14.71□□□□□ -0.05
RTN4-201ENST00000317610 TTTY13Q9BZ97 58 aa14.71□□□□□ -0.05
RTN4-201ENST00000317610 MSRB2Q9Y3D2 182 aa14.71□□□□□ -0.05
RTN4-201ENST00000317610 IGHV3-35A0A0C4DH35 117 aa14.7□□□□□ -0.06
RTN4-201ENST00000317610 SMIM17P0DL12 118 aa14.7□□□□□ -0.06
RTN4-201ENST00000317610 C15orf32Q32M92 178 aa14.7□□□□□ -0.06
RTN4-201ENST00000317610 NRACQ8N912 160 aa14.7□□□□□ -0.06
RTN4-201ENST00000317610 AGPAT4-IT1Q9H0P7 198 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms