RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 MGAQ8IWI9 3026 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 SPTBN2O15020 2390 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 ARID1AO14497 2285 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 POLEQ07864 2286 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 ARFGEF3Q5TH69 2177 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 ZNF727A8MUV8 499 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 TMEM250H0YL14 139 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 PANO1I0J062 215 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 TCAPO15273 167 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 HMGB3O15347 200 aaKnown RBP2.74□□□□□ -1.97
SMCO3-201ENST00000316048 FOXH1O75593 365 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 CNIH1O95406 144 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 MINOS1Q5TGZ0 78 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 MIC13Q5XKP0 118 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 C12orf54Q6X4T0 127 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 SSX7Q7RTT5 188 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 CYB561D1Q8N8Q1 229 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 NPBQ8NG41 125 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 OR2D3Q8NGH3 330 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 OR1N2Q8NGR9 330 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 OR2T10Q8NGZ9 312 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 EEF1AKMT3Q96AZ1 226 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 FAM210BQ96KR6 192 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 GGTLC1Q9BX51 225 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 SIGLEC9Q9Y336 463 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 HILPDAQ9Y5L2 63 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 MINOS1-NBL1R4GNA1 71 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 PRRC2CQ9Y520 2896 aaKnown RBP2.73□□□□□ -1.97
SMCO3-201ENST00000316048 A0A087WWC5 75 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 TMEM213A2RRL7 107 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 CYSRT1A8MQ03 144 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 ODF3BA8MYP8 253 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 E7EUB6 86 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 PDE6DO43924 150 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 YIF1AO95070 293 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 MT-ND4LP03901 98 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 FBP1P09467 338 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 OR10J1P30954 320 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 BRS3P32247 399 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 UBE2E1P51965 193 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 TAS2R45P59539 299 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 WT1-ASQ06250 92 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 HES1Q14469 280 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 TMEM241Q24JQ0 296 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 FAM78BQ5VT40 261 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 SLC16A13Q7RTY0 426 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 VMO1Q7Z5L0 202 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 CBLN2Q8IUK8 224 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 MALSU1Q96EH3 234 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 ACY3Q96HD9 319 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 PFDN5Q99471 154 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 C12orf57Q99622 126 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 CCL19Q99731 98 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 FBXL15Q9H469 300 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 SMAD5-AS1Q9Y6J3 95 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 PIEZO2Q9H5I5 2752 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 PCNX1Q96RV3 2341 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 PLCE1Q9P212 2302 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 USF3Q68DE3 2245 aa2.73□□□□□ -1.97
SMCO3-201ENST00000316048 RP1L1Q8IWN7 2480 aaPredicted RBP2.73□□□□□ -1.97
SMCO3-201ENST00000316048 CFAP47Q6ZTR5 3102 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 TCRBV4S1A1TA0A5B7 111 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 C11orf94C9JXX5 98 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 F6UZH7 168 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 LINC00869P0C866 280 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 DEFA4P12838 97 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 PAX6P26367 422 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 CNTFRP26992 372 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 PRB3Q04118 309 aaPredicted RBP2.72□□□□□ -1.97
SMCO3-201ENST00000316048 MMDQ15546 238 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 SPNS3Q6ZMD2 512 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 CYP2G1PQ6ZSU1 146 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 OR1P1Q8NH06 330 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 SRSF12Q8WXF0 261 aaKnown RBP2.72□□□□□ -1.97
SMCO3-201ENST00000316048 SMIM7Q9BQ49 75 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 MRPL32Q9BYC8 188 aaKnown RBP2.72□□□□□ -1.97
SMCO3-201ENST00000316048 BPESC1Q9GZL8 116 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 TMEM167BQ9NRX6 74 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 TMEM242Q9NWH2 141 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 NAT8Q9UHE5 227 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 TP53TG3Q9ULZ0 132 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 FUT9Q9Y231 359 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 TET2Q6N021 2002 aaPredicted RBP2.72□□□□□ -1.97
SMCO3-201ENST00000316048 A0A1W2PRD5 423 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 A0A1W2PRF3 423 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 A0A1W2PRM7 423 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 IGLC7A0M8Q6 106 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 NCBP2LA6PVI3 153 aaKnown RBP2.72□□□□□ -1.97
SMCO3-201ENST00000316048 COLCA2A8K830 154 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 C1orf196B1AJZ1 125 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 CLDN34H7C241 214 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 CD5LO43866 347 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 NDUFA3O95167 84 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 REG1AP05451 166 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 LINC00614P0C842 121 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 ARL14EPLP0DKL9 152 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 C8orf88P0DMB2 117 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 PMCHP20382 165 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 GCHFRP30047 84 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 AKR1C3P42330 323 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms