RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 ERCC8Q13216 396 aa12.26□□□□□ -0.45
SLC39A1-201ENST00000310483 JKAMPQ9P055 326 aa12.26□□□□□ -0.45
SLC39A1-201ENST00000310483 WNK2Q9Y3S1 2297 aa12.26□□□□□ -0.45
SLC39A1-201ENST00000310483 NEGR1Q7Z3B1 354 aa12.25□□□□□ -0.45
SLC39A1-201ENST00000310483 IGLV11-55A0A075B6I3 123 aa12.25□□□□□ -0.45
SLC39A1-201ENST00000310483 MFAP4P55083 255 aa12.25□□□□□ -0.45
SLC39A1-201ENST00000310483 NPFFR1Q9GZQ6 430 aa12.25□□□□□ -0.45
SLC39A1-201ENST00000310483 HHLA3Q9XRX5 114 aa12.25□□□□□ -0.45
SLC39A1-201ENST00000310483 SPTBN2O15020 2390 aa12.24□□□□□ -0.45
SLC39A1-201ENST00000310483 ODF1Q14990 250 aa12.24□□□□□ -0.45
SLC39A1-201ENST00000310483 CFHR4Q92496 578 aa12.24□□□□□ -0.45
SLC39A1-201ENST00000310483 SRSF8Q9BRL6 282 aaKnown RBP12.24□□□□□ -0.45
SLC39A1-201ENST00000310483 PRAC2D3DTV9 90 aa12.23□□□□□ -0.45
SLC39A1-201ENST00000310483 ZNF562Q6V9R5 426 aa12.23□□□□□ -0.45
SLC39A1-201ENST00000310483 GTSCR1Q86UQ5 136 aa12.23□□□□□ -0.45
SLC39A1-201ENST00000310483 PSMG3-AS1Q96PY0 264 aa12.23□□□□□ -0.45
SLC39A1-201ENST00000310483 RNF5Q99942 180 aa12.23□□□□□ -0.45
SLC39A1-201ENST00000310483 COL25A1Q9BXS0 654 aaPredicted RBP12.23□□□□□ -0.45
SLC39A1-201ENST00000310483 RAB1BQ9H0U4 201 aa12.23□□□□□ -0.45
SLC39A1-201ENST00000310483 TMEM238C9JI98 176 aa12.23□□□□□ -0.45
SLC39A1-201ENST00000310483 PRSS1P07477 247 aa12.23□□□□□ -0.45
SLC39A1-201ENST00000310483 PRR30Q53SZ7 412 aaPredicted RBP12.23□□□□□ -0.45
SLC39A1-201ENST00000310483 SAMD5Q5TGI4 173 aa12.23□□□□□ -0.45
SLC39A1-201ENST00000310483 MAP1LC3AQ9H492 121 aa12.23□□□□□ -0.45
SLC39A1-201ENST00000310483 TNFRSF6BO95407 300 aa12.22□□□□□ -0.45
SLC39A1-201ENST00000310483 DYNAPQ8N1N2 210 aa12.22□□□□□ -0.45
SLC39A1-201ENST00000310483 C21orf62Q9NYP8 219 aa12.22□□□□□ -0.45
SLC39A1-201ENST00000310483 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.22□□□□□ -0.45
SLC39A1-201ENST00000310483 COX8CQ7Z4L0 72 aa12.22□□□□□ -0.45
SLC39A1-201ENST00000310483 FOXC2Q99958 501 aa12.22□□□□□ -0.45
SLC39A1-201ENST00000310483 CACNA1BQ00975 2339 aa12.22□□□□□ -0.45
SLC39A1-201ENST00000310483 SMIM13P0DJ93 91 aa12.21□□□□□ -0.45
SLC39A1-201ENST00000310483 FABP2P12104 132 aa12.21□□□□□ -0.45
SLC39A1-201ENST00000310483 C5orf64Q2M2E5 130 aa12.21□□□□□ -0.45
SLC39A1-201ENST00000310483 RNF182Q8N6D2 247 aa12.21□□□□□ -0.45
SLC39A1-201ENST00000310483 CHAC1Q9BUX1 264 aa12.21□□□□□ -0.45
SLC39A1-201ENST00000310483 NCBP2LA6PVI3 153 aaKnown RBP12.21□□□□□ -0.46
SLC39A1-201ENST00000310483 NDUFA3O95167 84 aa12.21□□□□□ -0.46
SLC39A1-201ENST00000310483 RPL7P18124 248 aaKnown RBP12.21□□□□□ -0.46
SLC39A1-201ENST00000310483 BMI1P35226 326 aa12.21□□□□□ -0.46
SLC39A1-201ENST00000310483 TMEM158Q8WZ71 300 aa12.21□□□□□ -0.46
SLC39A1-201ENST00000310483 DPM3Q9P2X0 92 aa12.21□□□□□ -0.46
SLC39A1-201ENST00000310483 RIF1Q5UIP0 2472 aaKnown RBP12.21□□□□□ -0.46
SLC39A1-201ENST00000310483 HRNRQ86YZ3 2850 aaPredicted RBP12.21□□□□□ -0.46
SLC39A1-201ENST00000310483 IGHV3-66A0A0C4DH42 116 aa12.2□□□□□ -0.46
SLC39A1-201ENST00000310483 FCER1GP30273 86 aa12.2□□□□□ -0.46
SLC39A1-201ENST00000310483 LINC01560Q8TB33 94 aa12.2□□□□□ -0.46
SLC39A1-201ENST00000310483 ARPC1AQ92747 370 aa12.2□□□□□ -0.46
SLC39A1-201ENST00000310483 ZMAT4Q9H898 229 aa12.2□□□□□ -0.46
SLC39A1-201ENST00000310483 B9A039 149 aa12.2□□□□□ -0.46
SLC39A1-201ENST00000310483 TRGV3P03979 118 aa12.2□□□□□ -0.46
SLC39A1-201ENST00000310483 CTSGP08311 255 aa12.2□□□□□ -0.46
SLC39A1-201ENST00000310483 NPBQ8NG41 125 aa12.2□□□□□ -0.46
SLC39A1-201ENST00000310483 OR5A1Q8NGJ0 315 aa12.2□□□□□ -0.46
SLC39A1-201ENST00000310483 TMEM190Q8WZ59 177 aa12.2□□□□□ -0.46
SLC39A1-201ENST00000310483 MED13LQ71F56 2210 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 FBLL1A6NHQ2 334 aaKnown RBP12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 IGKCP01834 107 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 RPL24P83731 157 aaKnown RBP12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 ZC2HC1BQ5TFG8 222 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 IL17RELQ6ZVW7 336 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 Q8NA96 180 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 NHP2Q9NX24 153 aaKnown RBP12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 TRBV25-1A0A075B6N4 114 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 IGHV3OR16-13A0A075B7E8 117 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 IGHV3-74A0A0B4J1X5 117 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 TRAV26-2A0A0B4J265 109 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 TMEM8BA6NDV4 472 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 IGF2-ASQ6U949 168 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 Q6ZQT7 251 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 DTX2Q86UW9 622 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 TMEM160Q9NX00 188 aa12.19□□□□□ -0.46
SLC39A1-201ENST00000310483 TEX48A0A1B0GUV7 120 aa12.18□□□□□ -0.46
SLC39A1-201ENST00000310483 GOSR1O95249 250 aa12.18□□□□□ -0.46
SLC39A1-201ENST00000310483 CD3EP07766 207 aa12.18□□□□□ -0.46
SLC39A1-201ENST00000310483 ZNF672Q499Z4 452 aaPredicted RBP12.18□□□□□ -0.46
SLC39A1-201ENST00000310483 C11orf21Q9P2W6 132 aa12.18□□□□□ -0.46
SLC39A1-201ENST00000310483 TRAV40A0A0B4J280 105 aa12.18□□□□□ -0.46
SLC39A1-201ENST00000310483 FABP5P3A8MUU1 101 aa12.18□□□□□ -0.46
SLC39A1-201ENST00000310483 ZNF207O43670 478 aaKnown RBP12.18□□□□□ -0.46
SLC39A1-201ENST00000310483 MAPKAPK5-AS1Q8N8E1 139 aa12.18□□□□□ -0.46
SLC39A1-201ENST00000310483 PHLDA1Q8WV24 401 aaPredicted RBP12.18□□□□□ -0.46
SLC39A1-201ENST00000310483 ZFHX2Q9C0A1 2572 aaPredicted RBP12.18□□□□□ -0.46
SLC39A1-201ENST00000310483 GRNP28799 593 aaKnown RBP12.17□□□□□ -0.46
SLC39A1-201ENST00000310483 S100A7AQ86SG5 101 aa12.17□□□□□ -0.46
SLC39A1-201ENST00000310483 AGRNO00468 2067 aa12.17□□□□□ -0.46
SLC39A1-201ENST00000310483 LINC01546A6NGU7 62 aa12.17□□□□□ -0.46
SLC39A1-201ENST00000310483 TTC9CQ8N5M4 171 aa12.17□□□□□ -0.46
SLC39A1-201ENST00000310483 LY6G5BQ8NDX9 201 aa12.17□□□□□ -0.46
SLC39A1-201ENST00000310483 CNFNQ9BYD5 112 aa12.17□□□□□ -0.46
SLC39A1-201ENST00000310483 IGKV3D-20A0A0C4DH25 116 aa12.16□□□□□ -0.46
SLC39A1-201ENST00000310483 OR11H6Q8NGC7 330 aa12.16□□□□□ -0.46
SLC39A1-201ENST00000310483 ZNF48Q96MX3 618 aaPredicted RBP12.16□□□□□ -0.46
SLC39A1-201ENST00000310483 NXT2Q9NPJ8 142 aaKnown RBP12.16□□□□□ -0.46
SLC39A1-201ENST00000310483 MRPL35Q9NZE8 188 aaKnown RBP12.16□□□□□ -0.46
SLC39A1-201ENST00000310483 ANKHD1Q8IWZ3 2542 aaKnown RBP12.16□□□□□ -0.46
SLC39A1-201ENST00000310483 IGLV2-18A0A075B6J9 118 aa12.16□□□□□ -0.46
SLC39A1-201ENST00000310483 PIFOQ8TCI5 191 aa12.16□□□□□ -0.46
SLC39A1-201ENST00000310483 HIGD1BQ9P298 99 aa12.16□□□□□ -0.46
SLC39A1-201ENST00000310483 TLN1Q9Y490 2541 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms