RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 TMEM18Q96B42 140 aa16.21■□□□□ 0.19
ATG4D-201ENST00000309469 CLEC5AQ9NY25 188 aa16.21■□□□□ 0.19
ATG4D-201ENST00000309469 MXRA5Q9NR99 2828 aa16.21■□□□□ 0.19
ATG4D-201ENST00000309469 LINC00587B1AMM8 73 aa16.21■□□□□ 0.19
ATG4D-201ENST00000309469 ATP5L2Q7Z4Y8 100 aa16.21■□□□□ 0.19
ATG4D-201ENST00000309469 TMEM256Q8N2U0 113 aa16.21■□□□□ 0.19
ATG4D-201ENST00000309469 C16orf92Q96LL3 132 aa16.21■□□□□ 0.19
ATG4D-201ENST00000309469 CD5LO43866 347 aa16.2■□□□□ 0.18
ATG4D-201ENST00000309469 ERCC8Q13216 396 aa16.2■□□□□ 0.18
ATG4D-201ENST00000309469 RBPMS2Q6ZRY4 209 aaKnown RBP16.2■□□□□ 0.18
ATG4D-201ENST00000309469 LURAP1LQ8IV03 231 aa16.2■□□□□ 0.18
ATG4D-201ENST00000309469 PGLYRP4Q96LB8 373 aa16.2■□□□□ 0.18
ATG4D-201ENST00000309469 RHPN1-AS1Q9BWJ2 59 aa16.2■□□□□ 0.18
ATG4D-201ENST00000309469 GZMBP10144 247 aa16.19■□□□□ 0.18
ATG4D-201ENST00000309469 RNF152Q8N8N0 203 aa16.19■□□□□ 0.18
ATG4D-201ENST00000309469 SMPXQ9UHP9 88 aa16.19■□□□□ 0.18
ATG4D-201ENST00000309469 A0A1B0GXF2 115 aa16.19■□□□□ 0.18
ATG4D-201ENST00000309469 FOXA3P55318 350 aaPredicted RBP16.19■□□□□ 0.18
ATG4D-201ENST00000309469 FAM162BQ5T6X4 162 aa16.19■□□□□ 0.18
ATG4D-201ENST00000309469 GDF5OSQ5U4N7 250 aa16.19■□□□□ 0.18
ATG4D-201ENST00000309469 NDFIP1Q9BT67 221 aa16.19■□□□□ 0.18
ATG4D-201ENST00000309469 SH2D1AO60880 128 aa16.18■□□□□ 0.18
ATG4D-201ENST00000309469 APCSP02743 223 aa16.18■□□□□ 0.18
ATG4D-201ENST00000309469 LGALS1P09382 135 aaKnown RBP16.18■□□□□ 0.18
ATG4D-201ENST00000309469 UBE2E2Q96LR5 201 aa16.18■□□□□ 0.18
ATG4D-201ENST00000309469 TP53TG3Q9ULZ0 132 aa16.18■□□□□ 0.18
ATG4D-201ENST00000309469 Q0VG73 95 aa16.17■□□□□ 0.18
ATG4D-201ENST00000309469 YAE1D1Q9NRH1 226 aa16.17■□□□□ 0.18
ATG4D-201ENST00000309469 UFC1Q9Y3C8 167 aa16.17■□□□□ 0.18
ATG4D-201ENST00000309469 CAMPP49913 170 aa16.17■□□□□ 0.18
ATG4D-201ENST00000309469 KIAA1644Q3SXP7 199 aa16.17■□□□□ 0.18
ATG4D-201ENST00000309469 AGPAT4-IT1Q9H0P7 198 aa16.17■□□□□ 0.18
ATG4D-201ENST00000309469 SOCS3O14543 225 aa16.16■□□□□ 0.18
ATG4D-201ENST00000309469 NUPR1O60356 82 aa16.16■□□□□ 0.18
ATG4D-201ENST00000309469 BAGE3Q86Y29 109 aa16.16■□□□□ 0.18
ATG4D-201ENST00000309469 RPL11P62913 178 aaKnown RBP16.15■□□□□ 0.18
ATG4D-201ENST00000309469 HBBP68871 147 aa16.15■□□□□ 0.18
ATG4D-201ENST00000309469 SLAQ13239 276 aa16.15■□□□□ 0.18
ATG4D-201ENST00000309469 C20orf173Q96LM9 149 aa16.15■□□□□ 0.18
ATG4D-201ENST00000309469 NRN1Q9NPD7 142 aa16.15■□□□□ 0.18
ATG4D-201ENST00000309469 BMI1P35226 326 aa16.15■□□□□ 0.18
ATG4D-201ENST00000309469 ZNF80P51504 273 aaPredicted RBP16.15■□□□□ 0.18
ATG4D-201ENST00000309469 OR10J3Q5JRS4 329 aa16.15■□□□□ 0.18
ATG4D-201ENST00000309469 CDPF1Q6NVV7 123 aa16.15■□□□□ 0.18
ATG4D-201ENST00000309469 ZNF469Q96JG9 3925 aaPredicted RBP16.15■□□□□ 0.18
ATG4D-201ENST00000309469 TMEM189A5PLL7 270 aa16.14■□□□□ 0.17
ATG4D-201ENST00000309469 DNAJC9-AS1A6NH13 148 aa16.14■□□□□ 0.17
ATG4D-201ENST00000309469 SERF1AO75920 110 aa16.14■□□□□ 0.17
ATG4D-201ENST00000309469 EDN2P20800 178 aa16.14■□□□□ 0.17
ATG4D-201ENST00000309469 SRIP30626 198 aa16.14■□□□□ 0.17
ATG4D-201ENST00000309469 TMEM78Q5T7P6 136 aa16.14■□□□□ 0.17
ATG4D-201ENST00000309469 C9orf47Q6ZRZ4 202 aa16.14■□□□□ 0.17
ATG4D-201ENST00000309469 A8MWP6 167 aa16.13■□□□□ 0.17
ATG4D-201ENST00000309469 ESDP10768 282 aa16.13■□□□□ 0.17
ATG4D-201ENST00000309469 ZNF138P52744 262 aa16.13■□□□□ 0.17
ATG4D-201ENST00000309469 LINC00310P59036 64 aa16.13■□□□□ 0.17
ATG4D-201ENST00000309469 JOSD1Q15040 202 aaPredicted RBP16.13■□□□□ 0.17
ATG4D-201ENST00000309469 FAM181BA6NEQ2 426 aa16.13■□□□□ 0.17
ATG4D-201ENST00000309469 F2Z2F3 143 aa16.13■□□□□ 0.17
ATG4D-201ENST00000309469 KLHDC1Q8N7A1 406 aa16.13■□□□□ 0.17
ATG4D-201ENST00000309469 ZNF738Q8NE65 137 aa16.13■□□□□ 0.17
ATG4D-201ENST00000309469 UNC79Q9P2D8 2635 aa16.13■□□□□ 0.17
ATG4D-201ENST00000309469 IGHV4OR15-8A0A075B7B6 117 aa16.12■□□□□ 0.17
ATG4D-201ENST00000309469 A0A087WW49 117 aa16.12■□□□□ 0.17
ATG4D-201ENST00000309469 HAX1O00165 279 aa16.12■□□□□ 0.17
ATG4D-201ENST00000309469 CCDC168Q8NDH2 2452 aa16.12■□□□□ 0.17
ATG4D-201ENST00000309469 TMEM213A2RRL7 107 aa16.11■□□□□ 0.17
ATG4D-201ENST00000309469 Q6AWC8 147 aa16.11■□□□□ 0.17
ATG4D-201ENST00000309469 REC114Q7Z4M0 266 aa16.11■□□□□ 0.17
ATG4D-201ENST00000309469 SSBP4Q9BWG4 385 aaPredicted RBP16.11■□□□□ 0.17
ATG4D-201ENST00000309469 PPP1R14DQ9NXH3 145 aa16.11■□□□□ 0.17
ATG4D-201ENST00000309469 IGKV3-7A0A075B6H7 116 aa16.11■□□□□ 0.17
ATG4D-201ENST00000309469 TMSB15BA0A087X1C1 80 aa16.11■□□□□ 0.17
ATG4D-201ENST00000309469 FABP5P3A8MUU1 101 aa16.11■□□□□ 0.17
ATG4D-201ENST00000309469 Q6ZSV7 163 aa16.11■□□□□ 0.17
ATG4D-201ENST00000309469 A0A1B0GUT8 65 aa16.1■□□□□ 0.17
ATG4D-201ENST00000309469 LGALS9O00182 355 aa16.1■□□□□ 0.17
ATG4D-201ENST00000309469 FLNAP21333 2647 aaKnown RBP16.1■□□□□ 0.17
ATG4D-201ENST00000309469 PAFAH1B2P68402 229 aa16.1■□□□□ 0.17
ATG4D-201ENST00000309469 ESM1Q9NQ30 184 aa16.1■□□□□ 0.17
ATG4D-201ENST00000309469 SELENOKQ9Y6D0 94 aa16.1■□□□□ 0.17
ATG4D-201ENST00000309469 GCN1Q92616 2671 aaKnown RBP16.1■□□□□ 0.17
ATG4D-201ENST00000309469 OVOL1O14753 267 aa16.09■□□□□ 0.17
ATG4D-201ENST00000309469 SYNJ2BPP57105 145 aa16.09■□□□□ 0.17
ATG4D-201ENST00000309469 RPS20P60866 119 aaKnown RBP16.09■□□□□ 0.17
ATG4D-201ENST00000309469 SRSF2Q01130 221 aaKnown RBP16.09■□□□□ 0.17
ATG4D-201ENST00000309469 ITPR2Q14571 2701 aa16.09■□□□□ 0.17
ATG4D-201ENST00000309469 ZNF705DP0CH99 300 aaPredicted RBP16.09■□□□□ 0.17
ATG4D-201ENST00000309469 ZNF705BP0CI00 300 aaPredicted RBP16.09■□□□□ 0.17
ATG4D-201ENST00000309469 HOXD3P31249 432 aaPredicted RBP16.09■□□□□ 0.17
ATG4D-201ENST00000309469 RIGQ13278 110 aa16.09■□□□□ 0.17
ATG4D-201ENST00000309469 ARMS2P0C7Q2 107 aa16.08■□□□□ 0.16
ATG4D-201ENST00000309469 SRD5A1P18405 259 aa16.08■□□□□ 0.16
ATG4D-201ENST00000309469 ZMAT5Q9UDW3 170 aaKnown RBP16.08■□□□□ 0.16
ATG4D-201ENST00000309469 OR10J6PQ8NGY7 276 aa16.07■□□□□ 0.16
ATG4D-201ENST00000309469 LINC00477Q96M19 166 aa16.07■□□□□ 0.16
ATG4D-201ENST00000309469 TPPP3Q9BW30 176 aa16.07■□□□□ 0.16
ATG4D-201ENST00000309469 ORM1P02763 201 aa16.07■□□□□ 0.16
ATG4D-201ENST00000309469 TCTEX1D4Q5JR98 221 aa16.07■□□□□ 0.16
ATG4D-201ENST00000309469 C18orf65Q6ZTR6 163 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms