RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 A0A0U1RRA0 63 aa6.84□□□□□ -1.31
PPARGC1B-201ENST00000309241 GATD1Q8NB37 220 aa6.84□□□□□ -1.31
PPARGC1B-201ENST00000309241 ATOX1O00244 68 aa6.84□□□□□ -1.32
PPARGC1B-201ENST00000309241 COX8AP10176 69 aa6.84□□□□□ -1.32
PPARGC1B-201ENST00000309241 MIR17HGQ75NE6 70 aa6.84□□□□□ -1.32
PPARGC1B-201ENST00000309241 DEFB125Q8N687 156 aa6.84□□□□□ -1.32
PPARGC1B-201ENST00000309241 EFNA4P52798 201 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 PIP4P2Q8N4L2 257 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 ZNF114Q8NC26 417 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 PNRC2Q9NPJ4 139 aaKnown RBP6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 VMO1Q7Z5L0 202 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 IGKV1-8A0A0C4DH67 115 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 SOCS3O14543 225 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 SAA2P0DJI9 122 aaPredicted RBP6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 FAM110DQ8TAY7 271 aaPredicted RBP6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 DEPPQ9NTK1 212 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 LENEPQ9Y5L5 61 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 C18orf32Q8TCD1 76 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 GATA3P23771 443 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 DAD1P61803 113 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 LYPD6BQ8NI32 183 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 MINOS1Q5TGZ0 78 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 MINOS1-NBL1R4GNA1 71 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 C1QL2Q7Z5L3 287 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 EXPH5Q8NEV8 1989 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 IGFBPL1Q8WX77 278 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 RNF183Q96D59 192 aa6.83□□□□□ -1.32
PPARGC1B-201ENST00000309241 IGLC7A0M8Q6 106 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 LYNX1G3V0Z9 82 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 IGHV3-53P01767 116 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 LYNX1P0DP58 116 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 AMTNQ6UX39 209 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 IGHV1-2P23083 117 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 THAP8Q8NA92 274 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 PSPNO60542 156 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 IGLV3-19P01714 112 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 RPL36AP83881 106 aaKnown RBP6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 RPL36ALQ969Q0 106 aaKnown RBP6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 ZNF319Q9P2F9 582 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 LY6G5BQ8NDX9 201 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 TRBV7-1A0A0A6YYK4 115 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 HGFACQ04756 655 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 SS18Q15532 418 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 USMG5Q96IX5 58 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 TMEM14CQ9P0S9 112 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 IGHV3-64A0A075B6Q5 118 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 FXYD7P58549 80 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 TMEM105Q8N8V8 129 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 SIGLEC8Q9NYZ4 499 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 TRAV13-2A0A0B4J235 113 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 RNF152Q8N8N0 203 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 CHCHD2Q9Y6H1 151 aaPredicted RBP6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 PYGO2Q9BRQ0 406 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 CHD8Q9HCK8 2581 aa6.82□□□□□ -1.32
PPARGC1B-201ENST00000309241 IGLV3-12A0A075B6K2 115 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 C8orf86Q6ZUL3 223 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 C11orf52Q96A22 123 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 C20orf78Q9BR46 151 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 SPTBN4Q9H254 2564 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 PRSS29PA6NIE9 313 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 C12orf77C9JDV5 145 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 ZNF561-AS1K7EIQ3 104 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 NUP35Q8NFH5 326 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 HIGD1BQ9P298 99 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 EML5Q05BV3 1969 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 TDRG1Q3Y452 100 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 H3BUX3 64 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 J3QKU1 62 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 IMMP1LQ96LU5 166 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 APOC4P55056 127 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 HLA-DRB4P13762 266 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 CCL3L1P16619 93 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 AMN1Q8IY45 258 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 HLA-DRB4X5D2U9 266 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 NPIPB5A8MRT5 1133 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 LINC00527Q9UJ94 153 aa6.81□□□□□ -1.32
PPARGC1B-201ENST00000309241 SRRM4A7MD48 611 aaKnown RBP6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 D6R8Y8 96 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 PFN1P07737 140 aaKnown RBP6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 KLRD1Q13241 179 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 DUX4L9Q6RFH8 374 aaPredicted RBP6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 C1orf159Q96HA4 380 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 ZNF138P52744 262 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 TREML4Q6UXN2 200 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 UBE2E2Q96LR5 201 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 FAM223BA6NKX1 122 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 FAM223AQ8IWN6 122 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 RPP25LQ8N5L8 163 aaKnown RBP6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 DKK4Q9UBT3 224 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 PRSS46E5RG02 174 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 BRD3OSQ6XYD6 125 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 RNF223E7ERA6 249 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 PSG8Q9UQ74 426 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 C6orf226Q5I0X4 101 aa6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 KLF5Q13887 457 aaPredicted RBP6.8□□□□□ -1.32
PPARGC1B-201ENST00000309241 ATP5EP2Q5VTU8 51 aa6.79□□□□□ -1.32
PPARGC1B-201ENST00000309241 FASNP49327 2511 aaKnown RBP6.79□□□□□ -1.32
PPARGC1B-201ENST00000309241 C17orf98A8MV24 154 aa6.79□□□□□ -1.32
PPARGC1B-201ENST00000309241 NPC2P61916 151 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms