RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 TRAV12-2A0A075B6T6 113 aa16.26■□□□□ 0.19
HOXD4-201ENST00000306324 AMBPP02760 352 aa16.26■□□□□ 0.19
HOXD4-201ENST00000306324 CDKN1BP46527 198 aa16.26■□□□□ 0.19
HOXD4-201ENST00000306324 GOLT1AQ6ZVE7 132 aa16.26■□□□□ 0.19
HOXD4-201ENST00000306324 OR11H2Q8NH07 326 aa16.26■□□□□ 0.19
HOXD4-201ENST00000306324 RBAKDNA6NC62 111 aa16.25■□□□□ 0.19
HOXD4-201ENST00000306324 TEX46H3BTG2 121 aa16.25■□□□□ 0.19
HOXD4-201ENST00000306324 TSPOP30536 169 aa16.25■□□□□ 0.19
HOXD4-201ENST00000306324 IGHV3OR16-12A0A075B7B8 117 aa16.24■□□□□ 0.19
HOXD4-201ENST00000306324 J3KRW8 73 aa16.24■□□□□ 0.19
HOXD4-201ENST00000306324 IFNA7P01567 189 aa16.24■□□□□ 0.19
HOXD4-201ENST00000306324 CST9LP1Q5W188 147 aa16.24■□□□□ 0.19
HOXD4-201ENST00000306324 ARL6IP6Q8N6S5 226 aa16.24■□□□□ 0.19
HOXD4-201ENST00000306324 IGF2BP2-AS1Q96M15 143 aa16.24■□□□□ 0.19
HOXD4-201ENST00000306324 ODF3Q96PU9 254 aa16.24■□□□□ 0.19
HOXD4-201ENST00000306324 NKX6-2Q9C056 277 aaPredicted RBP16.24■□□□□ 0.19
HOXD4-201ENST00000306324 CRXO43186 299 aaPredicted RBP16.23■□□□□ 0.19
HOXD4-201ENST00000306324 PAGE4O60829 102 aa16.23■□□□□ 0.19
HOXD4-201ENST00000306324 INSP01308 110 aa16.23■□□□□ 0.19
HOXD4-201ENST00000306324 HBE1P02100 147 aa16.23■□□□□ 0.19
HOXD4-201ENST00000306324 TCRAP04437 139 aa16.23■□□□□ 0.19
HOXD4-201ENST00000306324 LEPP41159 167 aa16.23■□□□□ 0.19
HOXD4-201ENST00000306324 Q8TAT8 98 aa16.23■□□□□ 0.19
HOXD4-201ENST00000306324 ZNF492Q9P255 531 aa16.23■□□□□ 0.19
HOXD4-201ENST00000306324 EPDR1Q9UM22 224 aa16.23■□□□□ 0.19
HOXD4-201ENST00000306324 TRAV1-1A0A0B4J248 108 aa16.22■□□□□ 0.19
HOXD4-201ENST00000306324 PPT1P50897 306 aa16.22■□□□□ 0.19
HOXD4-201ENST00000306324 ZNF138P52744 262 aa16.22■□□□□ 0.19
HOXD4-201ENST00000306324 CCL20P78556 96 aa16.22■□□□□ 0.19
HOXD4-201ENST00000306324 KIR3DS1Q14943 382 aa16.22■□□□□ 0.19
HOXD4-201ENST00000306324 TMEM208Q9BTX3 173 aa16.22■□□□□ 0.19
HOXD4-201ENST00000306324 GOLT1BQ9Y3E0 138 aa16.22■□□□□ 0.19
HOXD4-201ENST00000306324 K7EQM0 130 aa16.22■□□□□ 0.19
HOXD4-201ENST00000306324 TRAV8-1A0A0A6YYK1 113 aa16.21■□□□□ 0.19
HOXD4-201ENST00000306324 C1orf158Q8N1D5 194 aa16.21■□□□□ 0.19
HOXD4-201ENST00000306324 SGK494Q96LW2 274 aa16.21■□□□□ 0.19
HOXD4-201ENST00000306324 ATG101Q9BSB4 218 aa16.21■□□□□ 0.19
HOXD4-201ENST00000306324 GNG13Q9P2W3 67 aa16.21■□□□□ 0.19
HOXD4-201ENST00000306324 ARL2-SNX15V9GYD0 113 aa16.21■□□□□ 0.19
HOXD4-201ENST00000306324 SERTM2A0A1B0GWG4 89 aa16.2■□□□□ 0.18
HOXD4-201ENST00000306324 ATP5G3P48201 142 aa16.2■□□□□ 0.18
HOXD4-201ENST00000306324 BLOC1S1P78537 153 aa16.2■□□□□ 0.18
HOXD4-201ENST00000306324 ZNF705AQ6ZN79 300 aaPredicted RBP16.2■□□□□ 0.18
HOXD4-201ENST00000306324 CYB561D1Q8N8Q1 229 aa16.2■□□□□ 0.18
HOXD4-201ENST00000306324 FAM19A4Q96LR4 140 aa16.2■□□□□ 0.18
HOXD4-201ENST00000306324 X6R8D5 127 aa16.2■□□□□ 0.18
HOXD4-201ENST00000306324 GFI1BQ5VTD9 330 aa16.19■□□□□ 0.18
HOXD4-201ENST00000306324 MANBALQ9NQG1 85 aa16.19■□□□□ 0.18
HOXD4-201ENST00000306324 PEX7O00628 323 aa16.18■□□□□ 0.18
HOXD4-201ENST00000306324 GPX1P07203 203 aa16.18■□□□□ 0.18
HOXD4-201ENST00000306324 RBMY1A1P0DJD3 496 aaKnown RBP16.18■□□□□ 0.18
HOXD4-201ENST00000306324 RBMY1CP0DJD4 496 aa16.18■□□□□ 0.18
HOXD4-201ENST00000306324 RBMY1FQ15415 496 aaKnown RBP16.18■□□□□ 0.18
HOXD4-201ENST00000306324 A0A0J9YWU9 116 aa16.17■□□□□ 0.18
HOXD4-201ENST00000306324 CRISP2P16562 243 aa16.17■□□□□ 0.18
HOXD4-201ENST00000306324 TEX261Q6UWH6 196 aa16.17■□□□□ 0.18
HOXD4-201ENST00000306324 CCDC28AQ8IWP9 274 aa16.17■□□□□ 0.18
HOXD4-201ENST00000306324 HIST1H2BAQ96A08 127 aa16.17■□□□□ 0.18
HOXD4-201ENST00000306324 TRAV12-3A0A0B4J271 114 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 KLLNB2CW77 178 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 DEFB4AO15263 64 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 MIFP14174 115 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 RNASE4P34096 147 aaKnown RBP16.16■□□□□ 0.18
HOXD4-201ENST00000306324 ZFAND2AQ8N6M9 145 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 IGHV4-28A0A0C4DH34 117 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 TRBV7-9A0A0J9YWB2 115 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 C7orf71A4D174 169 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 C11orf94C9JXX5 98 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 F6UZH7 168 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 IFNA1P01562 189 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 NMBP08949 121 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 BTN1A1Q13410 526 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 TMEM256Q8N2U0 113 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 TMEM75Q8N9X5 138 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 LINC00479Q96M42 142 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 LINC01587Q99440 93 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 TCEAL7Q9BRU2 100 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 LENEPQ9Y5L5 61 aa16.16■□□□□ 0.18
HOXD4-201ENST00000306324 TRAV34A0A0B4J273 112 aa16.15■□□□□ 0.18
HOXD4-201ENST00000306324 FLI1Q01543 452 aaPredicted RBP16.15■□□□□ 0.18
HOXD4-201ENST00000306324 PRR9Q5T870 116 aa16.15■□□□□ 0.18
HOXD4-201ENST00000306324 PRNTQ86SH4 94 aa16.15■□□□□ 0.18
HOXD4-201ENST00000306324 Q8NAQ8 132 aa16.15■□□□□ 0.18
HOXD4-201ENST00000306324 ZNF680Q8NEM1 530 aa16.15■□□□□ 0.18
HOXD4-201ENST00000306324 NEU1Q99519 415 aa16.15■□□□□ 0.18
HOXD4-201ENST00000306324 C20orf144Q9BQM9 153 aa16.15■□□□□ 0.18
HOXD4-201ENST00000306324 NIPSNAP3BQ9BS92 247 aa16.15■□□□□ 0.18
HOXD4-201ENST00000306324 EDA2RQ9HAV5 297 aa16.15■□□□□ 0.18
HOXD4-201ENST00000306324 PSG8Q9UQ74 426 aa16.15■□□□□ 0.18
HOXD4-201ENST00000306324 HTN1P15515 57 aa16.14■□□□□ 0.17
HOXD4-201ENST00000306324 NDFIP1Q9BT67 221 aa16.14■□□□□ 0.17
HOXD4-201ENST00000306324 TREM1Q9NP99 234 aa16.14■□□□□ 0.17
HOXD4-201ENST00000306324 SMIM9A6NGZ8 99 aa16.13■□□□□ 0.17
HOXD4-201ENST00000306324 IGLV2-11P01706 119 aa16.13■□□□□ 0.17
HOXD4-201ENST00000306324 WWC2-AS2Q96NR7 200 aa16.13■□□□□ 0.17
HOXD4-201ENST00000306324 SCO2A0A1W2PP80 73 aa16.12■□□□□ 0.17
HOXD4-201ENST00000306324 FBLL1A6NHQ2 334 aaKnown RBP16.12■□□□□ 0.17
HOXD4-201ENST00000306324 ZNF705GA8MUZ8 300 aaPredicted RBP16.12■□□□□ 0.17
HOXD4-201ENST00000306324 H7BYZ3 331 aa16.12■□□□□ 0.17
HOXD4-201ENST00000306324 PRM2P04554 102 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms