RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 DNAH9Q9NYC9 4486 aa17.88■□□□□ 0.45
HOXC9-201ENST00000303450 M0R2Z0 102 aa17.88■□□□□ 0.45
HOXC9-201ENST00000303450 SPRY2O43597 315 aa17.88■□□□□ 0.45
HOXC9-201ENST00000303450 CT45A10P0DMU9 189 aa17.88■□□□□ 0.45
HOXC9-201ENST00000303450 RNF183Q96D59 192 aa17.88■□□□□ 0.45
HOXC9-201ENST00000303450 EPDR1Q9UM22 224 aa17.88■□□□□ 0.45
HOXC9-201ENST00000303450 TP53TG1Q9Y2A0 90 aa17.88■□□□□ 0.45
HOXC9-201ENST00000303450 AMBPP02760 352 aa17.87■□□□□ 0.45
HOXC9-201ENST00000303450 TCRAP04437 139 aa17.87■□□□□ 0.45
HOXC9-201ENST00000303450 TSPOP30536 169 aa17.87■□□□□ 0.45
HOXC9-201ENST00000303450 OVOL2Q9BRP0 275 aa17.87■□□□□ 0.45
HOXC9-201ENST00000303450 GNG13Q9P2W3 67 aa17.87■□□□□ 0.45
HOXC9-201ENST00000303450 K7EQM0 130 aa17.86■□□□□ 0.45
HOXC9-201ENST00000303450 CDKN1BP46527 198 aa17.86■□□□□ 0.45
HOXC9-201ENST00000303450 ZNF680Q8NEM1 530 aa17.86■□□□□ 0.45
HOXC9-201ENST00000303450 ODF3Q96PU9 254 aa17.86■□□□□ 0.45
HOXC9-201ENST00000303450 MANBALQ9NQG1 85 aa17.86■□□□□ 0.45
HOXC9-201ENST00000303450 SERTM2A0A1B0GWG4 89 aa17.85■□□□□ 0.45
HOXC9-201ENST00000303450 CSNK1G2-AS1Q8NCQ2 148 aa17.85■□□□□ 0.45
HOXC9-201ENST00000303450 LEPP41159 167 aa17.84■□□□□ 0.45
HOXC9-201ENST00000303450 ZNF138P52744 262 aa17.84■□□□□ 0.45
HOXC9-201ENST00000303450 ATG101Q9BSB4 218 aa17.84■□□□□ 0.45
HOXC9-201ENST00000303450 ZNF492Q9P255 531 aa17.84■□□□□ 0.45
HOXC9-201ENST00000303450 TRAV12-2A0A075B6T6 113 aa17.83■□□□□ 0.45
HOXC9-201ENST00000303450 ATP5G3P48201 142 aa17.83■□□□□ 0.45
HOXC9-201ENST00000303450 CCDC28AQ8IWP9 274 aa17.83■□□□□ 0.45
HOXC9-201ENST00000303450 CYB561D1Q8N8Q1 229 aa17.83■□□□□ 0.45
HOXC9-201ENST00000303450 IGF2BP2-AS1Q96M15 143 aa17.83■□□□□ 0.45
HOXC9-201ENST00000303450 COL7A1Q02388 2944 aa17.83■□□□□ 0.45
HOXC9-201ENST00000303450 INSP01308 110 aa17.82■□□□□ 0.44
HOXC9-201ENST00000303450 IFNA1P01562 189 aa17.82■□□□□ 0.44
HOXC9-201ENST00000303450 Q8TAT8 98 aa17.82■□□□□ 0.44
HOXC9-201ENST00000303450 HIST1H2BAQ96A08 127 aa17.82■□□□□ 0.44
HOXC9-201ENST00000303450 TCEAL7Q9BRU2 100 aa17.82■□□□□ 0.44
HOXC9-201ENST00000303450 TGP01266 2768 aa17.82■□□□□ 0.44
HOXC9-201ENST00000303450 C11orf94C9JXX5 98 aa17.82■□□□□ 0.44
HOXC9-201ENST00000303450 F6UZH7 168 aa17.82■□□□□ 0.44
HOXC9-201ENST00000303450 PEX7O00628 323 aa17.82■□□□□ 0.44
HOXC9-201ENST00000303450 CRXO43186 299 aaPredicted RBP17.82■□□□□ 0.44
HOXC9-201ENST00000303450 RARRES2Q99969 163 aa17.82■□□□□ 0.44
HOXC9-201ENST00000303450 TRAV8-1A0A0A6YYK1 113 aa17.81■□□□□ 0.44
HOXC9-201ENST00000303450 J3KRW8 73 aa17.81■□□□□ 0.44
HOXC9-201ENST00000303450 OR11H2Q8NH07 326 aa17.81■□□□□ 0.44
HOXC9-201ENST00000303450 FAM19A4Q96LR4 140 aa17.81■□□□□ 0.44
HOXC9-201ENST00000303450 SGK494Q96LW2 274 aa17.81■□□□□ 0.44
HOXC9-201ENST00000303450 GOLT1BQ9Y3E0 138 aa17.81■□□□□ 0.44
HOXC9-201ENST00000303450 U3KQK5 164 aa17.81■□□□□ 0.44
HOXC9-201ENST00000303450 PMS2P11Q13670 270 aa17.8■□□□□ 0.44
HOXC9-201ENST00000303450 LYPD6BQ8NI32 183 aa17.8■□□□□ 0.44
HOXC9-201ENST00000303450 TENM3Q9P273 2699 aa17.8■□□□□ 0.44
HOXC9-201ENST00000303450 IGHV3OR16-12A0A075B7B8 117 aa17.79■□□□□ 0.44
HOXC9-201ENST00000303450 TRBV7-9A0A0J9YWB2 115 aa17.79■□□□□ 0.44
HOXC9-201ENST00000303450 TMEM75Q8N9X5 138 aa17.79■□□□□ 0.44
HOXC9-201ENST00000303450 TMEM208Q9BTX3 173 aa17.79■□□□□ 0.44
HOXC9-201ENST00000303450 LENEPQ9Y5L5 61 aa17.79■□□□□ 0.44
HOXC9-201ENST00000303450 HUWE1Q7Z6Z7 4374 aaKnown RBP17.78■□□□□ 0.44
HOXC9-201ENST00000303450 CRISP2P16562 243 aa17.78■□□□□ 0.44
HOXC9-201ENST00000303450 KIR3DS1Q14943 382 aa17.78■□□□□ 0.44
HOXC9-201ENST00000303450 TXNDC17Q9BRA2 123 aa17.78■□□□□ 0.44
HOXC9-201ENST00000303450 FBLL1A6NHQ2 334 aaKnown RBP17.77■□□□□ 0.44
HOXC9-201ENST00000303450 GPX1P07203 203 aa17.77■□□□□ 0.44
HOXC9-201ENST00000303450 NMBP08949 121 aa17.77■□□□□ 0.44
HOXC9-201ENST00000303450 BCL2P10415 239 aa17.77■□□□□ 0.44
HOXC9-201ENST00000303450 GFI1BQ5VTD9 330 aa17.77■□□□□ 0.44
HOXC9-201ENST00000303450 ZNF705AQ6ZN79 300 aaPredicted RBP17.77■□□□□ 0.44
HOXC9-201ENST00000303450 C1orf158Q8N1D5 194 aa17.77■□□□□ 0.44
HOXC9-201ENST00000303450 LINC00479Q96M42 142 aa17.77■□□□□ 0.44
HOXC9-201ENST00000303450 PSG8Q9UQ74 426 aa17.77■□□□□ 0.44
HOXC9-201ENST00000303450 KLLNB2CW77 178 aa17.77■□□□□ 0.43
HOXC9-201ENST00000303450 TAGLN2P37802 199 aaKnown RBP17.77■□□□□ 0.43
HOXC9-201ENST00000303450 FLI1Q01543 452 aaPredicted RBP17.77■□□□□ 0.43
HOXC9-201ENST00000303450 PCNPQ8WW12 178 aaKnown RBP17.77■□□□□ 0.43
HOXC9-201ENST00000303450 TRAV34A0A0B4J273 112 aa17.76■□□□□ 0.43
HOXC9-201ENST00000303450 IGLV2-11P01706 119 aa17.76■□□□□ 0.43
HOXC9-201ENST00000303450 MEF2BQ02080 365 aaPredicted RBP17.76■□□□□ 0.43
HOXC9-201ENST00000303450 PRNTQ86SH4 94 aa17.76■□□□□ 0.43
HOXC9-201ENST00000303450 ZFAND2AQ8N6M9 145 aa17.76■□□□□ 0.43
HOXC9-201ENST00000303450 NDFIP1Q9BT67 221 aa17.76■□□□□ 0.43
HOXC9-201ENST00000303450 RNASE4P34096 147 aaKnown RBP17.75■□□□□ 0.43
HOXC9-201ENST00000303450 C20orf144Q9BQM9 153 aa17.75■□□□□ 0.43
HOXC9-201ENST00000303450 TREM1Q9NP99 234 aa17.75■□□□□ 0.43
HOXC9-201ENST00000303450 VAX2Q9UIW0 290 aa17.75■□□□□ 0.43
HOXC9-201ENST00000303450 TRAV12-3A0A0B4J271 114 aa17.74■□□□□ 0.43
HOXC9-201ENST00000303450 SCO2A0A1W2PP80 73 aa17.74■□□□□ 0.43
HOXC9-201ENST00000303450 C7orf71A4D174 169 aa17.74■□□□□ 0.43
HOXC9-201ENST00000303450 AKR1C3P42330 323 aa17.74■□□□□ 0.43
HOXC9-201ENST00000303450 UBE2G1P62253 170 aa17.74■□□□□ 0.43
HOXC9-201ENST00000303450 TMEM256Q8N2U0 113 aa17.74■□□□□ 0.43
HOXC9-201ENST00000303450 X6R8D5 127 aa17.74■□□□□ 0.43
HOXC9-201ENST00000303450 RBMY1A1P0DJD3 496 aaKnown RBP17.73■□□□□ 0.43
HOXC9-201ENST00000303450 RBMY1CP0DJD4 496 aa17.73■□□□□ 0.43
HOXC9-201ENST00000303450 BTN1A1Q13410 526 aa17.73■□□□□ 0.43
HOXC9-201ENST00000303450 RBMY1FQ15415 496 aaKnown RBP17.73■□□□□ 0.43
HOXC9-201ENST00000303450 FMC1Q96HJ9 113 aa17.73■□□□□ 0.43
HOXC9-201ENST00000303450 LINC01587Q99440 93 aa17.73■□□□□ 0.43
HOXC9-201ENST00000303450 NIPSNAP3BQ9BS92 247 aa17.73■□□□□ 0.43
HOXC9-201ENST00000303450 LOC102723971A0A1B0GUV8 181 aa17.72■□□□□ 0.43
HOXC9-201ENST00000303450 PRR9Q5T870 116 aa17.72■□□□□ 0.43
HOXC9-201ENST00000303450 TVP23CQ96ET8 276 aa17.72■□□□□ 0.43
HOXC9-201ENST00000303450 RBFOX3A6NFN3 312 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms