RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 PRR20EP86478 221 aa16.79■□□□□ 0.28
LETM1-201ENST00000302787 PRR20CP86479 221 aa16.79■□□□□ 0.28
LETM1-201ENST00000302787 PRR20DP86480 221 aa16.79■□□□□ 0.28
LETM1-201ENST00000302787 PRR20BP86481 221 aa16.79■□□□□ 0.28
LETM1-201ENST00000302787 PRR20AP86496 221 aa16.79■□□□□ 0.28
LETM1-201ENST00000302787 ASPHD1Q5U4P2 390 aa16.79■□□□□ 0.28
LETM1-201ENST00000302787 RNF166Q96A37 237 aaPredicted RBP16.79■□□□□ 0.28
LETM1-201ENST00000302787 C1QTNF4Q9BXJ3 329 aa16.79■□□□□ 0.28
LETM1-201ENST00000302787 CST9LQ9H4G1 147 aa16.79■□□□□ 0.28
LETM1-201ENST00000302787 FRMPD3Q5JV73 1810 aa16.78■□□□□ 0.28
LETM1-201ENST00000302787 ZC2HC1AQ96GY0 325 aa16.78■□□□□ 0.28
LETM1-201ENST00000302787 VGLL1Q99990 258 aa16.78■□□□□ 0.28
LETM1-201ENST00000302787 PLA2G2CQ5R387 149 aa16.78■□□□□ 0.28
LETM1-201ENST00000302787 PRSS57Q6UWY2 283 aa16.78■□□□□ 0.28
LETM1-201ENST00000302787 POU2AF1Q16633 256 aa16.78■□□□□ 0.28
LETM1-201ENST00000302787 IGLC1P0CG04 106 aa16.77■□□□□ 0.28
LETM1-201ENST00000302787 LEPROTO15243 131 aa16.77■□□□□ 0.28
LETM1-201ENST00000302787 C6orf226Q5I0X4 101 aa16.77■□□□□ 0.28
LETM1-201ENST00000302787 SSBP2P81877 361 aaPredicted RBP16.77■□□□□ 0.28
LETM1-201ENST00000302787 PRIMA1Q86XR5 153 aa16.77■□□□□ 0.28
LETM1-201ENST00000302787 GTSF1LQ9H1H1 148 aa16.77■□□□□ 0.28
LETM1-201ENST00000302787 TMEM141Q96I45 108 aa16.77■□□□□ 0.27
LETM1-201ENST00000302787 TRAV26-2A0A0B4J265 109 aa16.76■□□□□ 0.27
LETM1-201ENST00000302787 SPINK13Q1W4C9 94 aa16.76■□□□□ 0.27
LETM1-201ENST00000302787 K7EN84 100 aa16.76■□□□□ 0.27
LETM1-201ENST00000302787 KNCNA6PVL3 124 aa16.76■□□□□ 0.27
LETM1-201ENST00000302787 IGLL1P15814 213 aa16.76■□□□□ 0.27
LETM1-201ENST00000302787 TRAV8-3A0A0A6YYJ7 113 aa16.76■□□□□ 0.27
LETM1-201ENST00000302787 SIGLEC8Q9NYZ4 499 aa16.76■□□□□ 0.27
LETM1-201ENST00000302787 KLK9Q9UKQ9 250 aa16.76■□□□□ 0.27
LETM1-201ENST00000302787 LGALS1P09382 135 aaKnown RBP16.75■□□□□ 0.27
LETM1-201ENST00000302787 GATA3P23771 443 aa16.75■□□□□ 0.27
LETM1-201ENST00000302787 PKDREJQ9NTG1 2253 aa16.75■□□□□ 0.27
LETM1-201ENST00000302787 OCIAD2Q56VL3 154 aa16.75■□□□□ 0.27
LETM1-201ENST00000302787 C11orf53Q8IXP5 236 aa16.75■□□□□ 0.27
LETM1-201ENST00000302787 GPR179Q6PRD1 2367 aa16.74■□□□□ 0.27
LETM1-201ENST00000302787 KIAA1671Q9BY89 1806 aa16.74■□□□□ 0.27
LETM1-201ENST00000302787 DOCK11Q5JSL3 2073 aa16.74■□□□□ 0.27
LETM1-201ENST00000302787 NDUFA4O00483 81 aa16.74■□□□□ 0.27
LETM1-201ENST00000302787 VWC2Q2TAL6 325 aa16.74■□□□□ 0.27
LETM1-201ENST00000302787 LGALS9BQ3B8N2 356 aa16.74■□□□□ 0.27
LETM1-201ENST00000302787 LGALS9CQ6DKI2 356 aa16.74■□□□□ 0.27
LETM1-201ENST00000302787 C9JAW5 83 aa16.73■□□□□ 0.27
LETM1-201ENST00000302787 ANXA2RQ3ZCQ2 193 aa16.73■□□□□ 0.27
LETM1-201ENST00000302787 K7EM74 188 aa16.73■□□□□ 0.27
LETM1-201ENST00000302787 PMVKQ15126 192 aa16.73■□□□□ 0.27
LETM1-201ENST00000302787 FGF23Q9GZV9 251 aaPredicted RBP16.73■□□□□ 0.27
LETM1-201ENST00000302787 RNF223E7ERA6 249 aa16.73■□□□□ 0.27
LETM1-201ENST00000302787 COX8AP10176 69 aa16.73■□□□□ 0.27
LETM1-201ENST00000302787 I3L3M4 83 aa16.72■□□□□ 0.27
LETM1-201ENST00000302787 NPYP01303 97 aa16.72■□□□□ 0.27
LETM1-201ENST00000302787 SSC4DQ8WTU2 575 aa16.72■□□□□ 0.27
LETM1-201ENST00000302787 KAAG1Q9UBP8 84 aa16.72■□□□□ 0.27
LETM1-201ENST00000302787 LTAP01374 205 aa16.72■□□□□ 0.27
LETM1-201ENST00000302787 NOTCH4Q99466 2003 aa16.72■□□□□ 0.27
LETM1-201ENST00000302787 NEGR1Q7Z3B1 354 aa16.72■□□□□ 0.27
LETM1-201ENST00000302787 RHODO00212 210 aa16.72■□□□□ 0.27
LETM1-201ENST00000302787 C9orf118A6NHY6 69 aa16.71■□□□□ 0.27
LETM1-201ENST00000302787 OVOL2Q9BRP0 275 aa16.71■□□□□ 0.27
LETM1-201ENST00000302787 IGHV1OR15-1A0A075B7D0 117 aa16.71■□□□□ 0.27
LETM1-201ENST00000302787 RNF138Q8WVD3 245 aa16.71■□□□□ 0.27
LETM1-201ENST00000302787 XCL2Q9UBD3 114 aa16.71■□□□□ 0.27
LETM1-201ENST00000302787 SDHAF1A6NFY7 115 aa16.71■□□□□ 0.27
LETM1-201ENST00000302787 C1orf122Q6ZSJ8 110 aa16.7■□□□□ 0.26
LETM1-201ENST00000302787 LINC01619G3V211 115 aa16.7■□□□□ 0.26
LETM1-201ENST00000302787 DEFB130BP0DP73 79 aa16.7■□□□□ 0.26
LETM1-201ENST00000302787 DEFB130AP0DP74 79 aa16.7■□□□□ 0.26
LETM1-201ENST00000302787 COL6A6A6NMZ7 2263 aa16.7■□□□□ 0.26
LETM1-201ENST00000302787 LAMTOR3Q9UHA4 124 aa16.7■□□□□ 0.26
LETM1-201ENST00000302787 KRTAP27-1Q3LI81 207 aa16.7■□□□□ 0.26
LETM1-201ENST00000302787 ZNF491Q8N8L2 437 aa16.69■□□□□ 0.26
LETM1-201ENST00000302787 RIF1Q5UIP0 2472 aaKnown RBP16.69■□□□□ 0.26
LETM1-201ENST00000302787 SS18Q15532 418 aa16.69■□□□□ 0.26
LETM1-201ENST00000302787 HIST1H4AP62805 103 aaKnown RBP16.69■□□□□ 0.26
LETM1-201ENST00000302787 C8orf31Q8N9H6 132 aa16.69■□□□□ 0.26
LETM1-201ENST00000302787 IGHV3-16A0A0C4DH30 117 aa16.68■□□□□ 0.26
LETM1-201ENST00000302787 MAPK1IP1LQ8NDC0 245 aa16.68■□□□□ 0.26
LETM1-201ENST00000302787 ZNF625Q96I27 306 aaPredicted RBP16.68■□□□□ 0.26
LETM1-201ENST00000302787 IGLC7A0M8Q6 106 aa16.68■□□□□ 0.26
LETM1-201ENST00000302787 FAM120AOSQ5T036 256 aa16.68■□□□□ 0.26
LETM1-201ENST00000302787 C17orf77Q96MU5 243 aa16.68■□□□□ 0.26
LETM1-201ENST00000302787 TRAV12-2A0A075B6T6 113 aa16.68■□□□□ 0.26
LETM1-201ENST00000302787 Q6ZSR3 168 aa16.67■□□□□ 0.26
LETM1-201ENST00000302787 MRPL35Q9NZE8 188 aaKnown RBP16.67■□□□□ 0.26
LETM1-201ENST00000302787 GAGE12JA6NER3 117 aa16.67■□□□□ 0.26
LETM1-201ENST00000302787 GAGE1Q13065 139 aa16.67■□□□□ 0.26
LETM1-201ENST00000302787 GAGE4Q13068 117 aa16.67■□□□□ 0.26
LETM1-201ENST00000302787 GAGE5Q13069 117 aa16.67■□□□□ 0.26
LETM1-201ENST00000302787 NPSP0C0P6 89 aa16.67■□□□□ 0.26
LETM1-201ENST00000302787 LYPD6Q86Y78 171 aa16.67■□□□□ 0.26
LETM1-201ENST00000302787 SMIM2Q9BVW6 85 aa16.67■□□□□ 0.26
LETM1-201ENST00000302787 SPINK8P0C7L1 97 aa16.66■□□□□ 0.26
LETM1-201ENST00000302787 SPAG8Q99932 426 aaPredicted RBP16.66■□□□□ 0.26
LETM1-201ENST00000302787 CDKN1BP46527 198 aa16.66■□□□□ 0.26
LETM1-201ENST00000302787 CTSZQ9UBR2 303 aa16.66■□□□□ 0.26
LETM1-201ENST00000302787 DOCK9Q9BZ29 2069 aa16.66■□□□□ 0.26
LETM1-201ENST00000302787 SP5Q6BEB4 398 aaPredicted RBP16.66■□□□□ 0.26
LETM1-201ENST00000302787 DOCK7Q96N67 2140 aa16.66■□□□□ 0.26
LETM1-201ENST00000302787 DENND4CQ5VZ89 1909 aa16.65■□□□□ 0.26
LETM1-201ENST00000302787 NUP210Q8TEM1 1887 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms