RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 RELNP78509 3460 aa10.56□□□□□ -0.72
CDH8-201ENST00000299345 IFI27P40305 119 aaPredicted RBP10.56□□□□□ -0.72
CDH8-201ENST00000299345 PRORYQ9H606 182 aa10.56□□□□□ -0.72
CDH8-201ENST00000299345 BSNQ9UPA5 3926 aa10.55□□□□□ -0.72
CDH8-201ENST00000299345 ZZEF1O43149 2961 aa10.55□□□□□ -0.72
CDH8-201ENST00000299345 PPIFP30405 207 aaKnown RBP10.55□□□□□ -0.72
CDH8-201ENST00000299345 ST20Q9HBF5 79 aa10.55□□□□□ -0.72
CDH8-201ENST00000299345 IGHV1-69DA0A0B4J2H0 117 aa10.55□□□□□ -0.72
CDH8-201ENST00000299345 IGHV1-69P01742 117 aa10.55□□□□□ -0.72
CDH8-201ENST00000299345 C5orf56Q8N8D9 126 aa10.55□□□□□ -0.72
CDH8-201ENST00000299345 PAX8Q06710 450 aa10.54□□□□□ -0.72
CDH8-201ENST00000299345 SLC25A34Q6PIV7 304 aa10.54□□□□□ -0.72
CDH8-201ENST00000299345 CCDC140Q96MF4 163 aa10.54□□□□□ -0.72
CDH8-201ENST00000299345 PRAC2D3DTV9 90 aa10.54□□□□□ -0.72
CDH8-201ENST00000299345 ARL3P36405 182 aa10.54□□□□□ -0.72
CDH8-201ENST00000299345 ZNF80P51504 273 aaPredicted RBP10.54□□□□□ -0.72
CDH8-201ENST00000299345 MRPL51Q4U2R6 128 aaKnown RBP10.54□□□□□ -0.72
CDH8-201ENST00000299345 ZFAND3Q9H8U3 227 aa10.54□□□□□ -0.72
CDH8-201ENST00000299345 GOLT1BQ9Y3E0 138 aa10.54□□□□□ -0.72
CDH8-201ENST00000299345 SMKR1H3BMG3 65 aa10.53□□□□□ -0.72
CDH8-201ENST00000299345 NCR2O95944 276 aa10.53□□□□□ -0.72
CDH8-201ENST00000299345 TMEM208Q9BTX3 173 aa10.53□□□□□ -0.72
CDH8-201ENST00000299345 MRPS16Q9Y3D3 137 aaKnown RBP10.53□□□□□ -0.72
CDH8-201ENST00000299345 IGHV4-61A0A0C4DH41 118 aa10.53□□□□□ -0.72
CDH8-201ENST00000299345 PF4V1P10720 104 aa10.53□□□□□ -0.72
CDH8-201ENST00000299345 DMRTA1Q5VZB9 504 aa10.53□□□□□ -0.72
CDH8-201ENST00000299345 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.53□□□□□ -0.72
CDH8-201ENST00000299345 IL17RELQ6ZVW7 336 aa10.53□□□□□ -0.72
CDH8-201ENST00000299345 ZNF493Q6ZR52 646 aa10.53□□□□□ -0.72
CDH8-201ENST00000299345 SPATA12Q7Z6I5 190 aa10.53□□□□□ -0.72
CDH8-201ENST00000299345 SIGLEC8Q9NYZ4 499 aa10.53□□□□□ -0.72
CDH8-201ENST00000299345 CACNA1AO00555 2505 aa10.52□□□□□ -0.73
CDH8-201ENST00000299345 J3KRW8 73 aa10.52□□□□□ -0.73
CDH8-201ENST00000299345 STPG4Q8N801 248 aa10.52□□□□□ -0.73
CDH8-201ENST00000299345 ZNF738Q8NE65 137 aa10.52□□□□□ -0.73
CDH8-201ENST00000299345 MAP1LC3AQ9H492 121 aa10.52□□□□□ -0.73
CDH8-201ENST00000299345 IGKV3-7A0A075B6H7 116 aa10.51□□□□□ -0.73
CDH8-201ENST00000299345 DLEU1O43261 78 aa10.51□□□□□ -0.73
CDH8-201ENST00000299345 IGHV3-11P01762 117 aa10.51□□□□□ -0.73
CDH8-201ENST00000299345 FXYD7P58549 80 aa10.51□□□□□ -0.73
CDH8-201ENST00000299345 C8orf86Q6ZUL3 223 aa10.51□□□□□ -0.73
CDH8-201ENST00000299345 FAM223BA6NKX1 122 aa10.51□□□□□ -0.73
CDH8-201ENST00000299345 FAM223AQ8IWN6 122 aa10.51□□□□□ -0.73
CDH8-201ENST00000299345 AGPAT4-IT1Q9H0P7 198 aa10.51□□□□□ -0.73
CDH8-201ENST00000299345 UFC1Q9Y3C8 167 aa10.51□□□□□ -0.73
CDH8-201ENST00000299345 H3BUX3 64 aa10.51□□□□□ -0.73
CDH8-201ENST00000299345 OVOL3O00110 214 aa10.51□□□□□ -0.73
CDH8-201ENST00000299345 CRXO43186 299 aaPredicted RBP10.51□□□□□ -0.73
CDH8-201ENST00000299345 AJUBAQ96IF1 538 aa10.51□□□□□ -0.73
CDH8-201ENST00000299345 ZNF747Q9BV97 191 aa10.51□□□□□ -0.73
CDH8-201ENST00000299345 A0A087X0K7 114 aa10.5□□□□□ -0.73
CDH8-201ENST00000299345 MSRB1Q9NZV6 116 aa10.5□□□□□ -0.73
CDH8-201ENST00000299345 HBDP02042 147 aa10.5□□□□□ -0.73
CDH8-201ENST00000299345 SPANXN1Q5VSR9 72 aa10.5□□□□□ -0.73
CDH8-201ENST00000299345 GATD1Q8NB37 220 aa10.5□□□□□ -0.73
CDH8-201ENST00000299345 ACACBO00763 2458 aa10.5□□□□□ -0.73
CDH8-201ENST00000299345 IGHG4P01861 327 aa10.49□□□□□ -0.73
CDH8-201ENST00000299345 PPBPP02775 128 aa10.49□□□□□ -0.73
CDH8-201ENST00000299345 PKD1L2Q7Z442 2459 aa10.49□□□□□ -0.73
CDH8-201ENST00000299345 RBAKDNA6NC62 111 aa10.49□□□□□ -0.73
CDH8-201ENST00000299345 NPYP01303 97 aa10.49□□□□□ -0.73
CDH8-201ENST00000299345 HIST1H1AQ02539 215 aaPredicted RBP10.49□□□□□ -0.73
CDH8-201ENST00000299345 HIF1ANQ9NWT6 349 aa10.49□□□□□ -0.73
CDH8-201ENST00000299345 NUDT3O95989 172 aa10.49□□□□□ -0.73
CDH8-201ENST00000299345 FAM106AQ4KMX7 169 aa10.49□□□□□ -0.73
CDH8-201ENST00000299345 PRSS57Q6UWY2 283 aa10.49□□□□□ -0.73
CDH8-201ENST00000299345 MS4A6AQ9H2W1 248 aa10.49□□□□□ -0.73
CDH8-201ENST00000299345 DCHS2Q6V1P9 2916 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 TCF21O43680 179 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 IGHV4-38-2P0DP08 117 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 S100A4P26447 101 aaKnown RBP10.48□□□□□ -0.73
CDH8-201ENST00000299345 COX8CQ7Z4L0 72 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 HRNRQ86YZ3 2850 aaPredicted RBP10.48□□□□□ -0.73
CDH8-201ENST00000299345 CSPG4Q6UVK1 2322 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 CLPSL1A2RUU4 121 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 NDUFS8O00217 210 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 IGLC6P0CF74 106 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 ZNF124Q15973 351 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 WFDC3Q8IUB2 231 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 OR10J6PQ8NGY7 276 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 EVI2AP22794 236 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 TCTAP57738 103 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 LOXL1Q08397 574 aaPredicted RBP10.48□□□□□ -0.73
CDH8-201ENST00000299345 C10orf105Q8TEF2 133 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 C18orf15Q96N68 181 aa10.48□□□□□ -0.73
CDH8-201ENST00000299345 CACNG7P62955 275 aa10.47□□□□□ -0.73
CDH8-201ENST00000299345 C9orf139Q6ZV77 190 aa10.47□□□□□ -0.73
CDH8-201ENST00000299345 MPV17L2Q567V2 206 aa10.47□□□□□ -0.73
CDH8-201ENST00000299345 LINC01545Q5VT33 79 aa10.47□□□□□ -0.73
CDH8-201ENST00000299345 SNAI2O43623 268 aa10.47□□□□□ -0.73
CDH8-201ENST00000299345 C12orf54Q6X4T0 127 aa10.47□□□□□ -0.73
CDH8-201ENST00000299345 IFI27L1Q96BM0 104 aa10.47□□□□□ -0.73
CDH8-201ENST00000299345 PRSS1P07477 247 aa10.46□□□□□ -0.73
CDH8-201ENST00000299345 MSMBP08118 114 aa10.46□□□□□ -0.73
CDH8-201ENST00000299345 LINC01559Q495D7 138 aa10.46□□□□□ -0.73
CDH8-201ENST00000299345 IGHV4-30-2A0A087WSY4 118 aa10.46□□□□□ -0.73
CDH8-201ENST00000299345 NPSP0C0P6 89 aa10.46□□□□□ -0.73
CDH8-201ENST00000299345 FAM208BQ5VWN6 2430 aa10.46□□□□□ -0.74
CDH8-201ENST00000299345 PTTG1IPP53801 180 aa10.46□□□□□ -0.74
CDH8-201ENST00000299345 MRPL53Q96EL3 112 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms