RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 KIAA1644Q3SXP7 199 aa17.3■□□□□ 0.36
VSTM4-201ENST00000298454 C20orf173Q96LM9 149 aa17.3■□□□□ 0.36
VSTM4-201ENST00000298454 C12orf57Q99622 126 aa17.3■□□□□ 0.36
VSTM4-201ENST00000298454 SMPXQ9UHP9 88 aa17.3■□□□□ 0.36
VSTM4-201ENST00000298454 IGKV3-7A0A075B6H7 116 aa17.3■□□□□ 0.36
VSTM4-201ENST00000298454 DNAJC9-AS1A6NH13 148 aa17.3■□□□□ 0.36
VSTM4-201ENST00000298454 K7EMT4 169 aa17.3■□□□□ 0.36
VSTM4-201ENST00000298454 SH2D1AO60880 128 aa17.3■□□□□ 0.36
VSTM4-201ENST00000298454 HLA-DQA1P01909 254 aa17.3■□□□□ 0.36
VSTM4-201ENST00000298454 LGALS1P09382 135 aaKnown RBP17.3■□□□□ 0.36
VSTM4-201ENST00000298454 S100A2P29034 98 aa17.3■□□□□ 0.36
VSTM4-201ENST00000298454 CAMPP49913 170 aa17.3■□□□□ 0.36
VSTM4-201ENST00000298454 ZNF80P51504 273 aaPredicted RBP17.3■□□□□ 0.36
VSTM4-201ENST00000298454 RASL11AQ6T310 242 aa17.3■□□□□ 0.36
VSTM4-201ENST00000298454 MRPL53Q96EL3 112 aaKnown RBP17.3■□□□□ 0.36
VSTM4-201ENST00000298454 A0A1B0GXF2 115 aa17.29■□□□□ 0.36
VSTM4-201ENST00000298454 FAM181BA6NEQ2 426 aa17.29■□□□□ 0.36
VSTM4-201ENST00000298454 RBPMS2Q6ZRY4 209 aaKnown RBP17.29■□□□□ 0.36
VSTM4-201ENST00000298454 RNF152Q8N8N0 203 aa17.29■□□□□ 0.36
VSTM4-201ENST00000298454 UBE2E2Q96LR5 201 aa17.29■□□□□ 0.36
VSTM4-201ENST00000298454 FAM231BA6NCW3 169 aa17.29■□□□□ 0.36
VSTM4-201ENST00000298454 SOCS3O14543 225 aa17.29■□□□□ 0.36
VSTM4-201ENST00000298454 FABP4P15090 132 aa17.29■□□□□ 0.36
VSTM4-201ENST00000298454 FAM162BQ5T6X4 162 aa17.29■□□□□ 0.36
VSTM4-201ENST00000298454 AGPAT4-IT1Q9H0P7 198 aa17.29■□□□□ 0.36
VSTM4-201ENST00000298454 SLAQ13239 276 aa17.28■□□□□ 0.36
VSTM4-201ENST00000298454 ATP5L2Q7Z4Y8 100 aa17.28■□□□□ 0.36
VSTM4-201ENST00000298454 HIST1H2BLQ99880 126 aa17.28■□□□□ 0.36
VSTM4-201ENST00000298454 ESM1Q9NQ30 184 aa17.28■□□□□ 0.36
VSTM4-201ENST00000298454 IGHV4OR15-8A0A075B7B6 117 aa17.28■□□□□ 0.36
VSTM4-201ENST00000298454 A0A087WW49 117 aa17.28■□□□□ 0.36
VSTM4-201ENST00000298454 PRR31Q5SQ13 230 aa17.28■□□□□ 0.36
VSTM4-201ENST00000298454 KLHDC1Q8N7A1 406 aa17.28■□□□□ 0.36
VSTM4-201ENST00000298454 NDFIP1Q9BT67 221 aa17.28■□□□□ 0.36
VSTM4-201ENST00000298454 NRN1Q9NPD7 142 aa17.28■□□□□ 0.36
VSTM4-201ENST00000298454 CUBNO60494 3623 aa17.27■□□□□ 0.36
VSTM4-201ENST00000298454 HECTD1Q9ULT8 2610 aa17.27■□□□□ 0.36
VSTM4-201ENST00000298454 CRISP2P16562 243 aa17.27■□□□□ 0.36
VSTM4-201ENST00000298454 TMEM256Q8N2U0 113 aa17.27■□□□□ 0.36
VSTM4-201ENST00000298454 OR10D4PQ8NGN7 298 aa17.27■□□□□ 0.36
VSTM4-201ENST00000298454 UFC1Q9Y3C8 167 aa17.27■□□□□ 0.36
VSTM4-201ENST00000298454 FASNP49327 2511 aaKnown RBP17.27■□□□□ 0.36
VSTM4-201ENST00000298454 APCSP02743 223 aa17.26■□□□□ 0.35
VSTM4-201ENST00000298454 C18orf65Q6ZTR6 163 aa17.26■□□□□ 0.35
VSTM4-201ENST00000298454 SSBP4Q9BWG4 385 aaPredicted RBP17.26■□□□□ 0.35
VSTM4-201ENST00000298454 ACANP16112 2415 aa17.26■□□□□ 0.35
VSTM4-201ENST00000298454 TMSB15BA0A087X1C1 80 aa17.26■□□□□ 0.35
VSTM4-201ENST00000298454 TMEM213A2RRL7 107 aa17.26■□□□□ 0.35
VSTM4-201ENST00000298454 ZNF705DP0CH99 300 aaPredicted RBP17.26■□□□□ 0.35
VSTM4-201ENST00000298454 ZNF705BP0CI00 300 aaPredicted RBP17.26■□□□□ 0.35
VSTM4-201ENST00000298454 SRD5A1P18405 259 aa17.26■□□□□ 0.35
VSTM4-201ENST00000298454 FOXA3P55318 350 aaPredicted RBP17.26■□□□□ 0.35
VSTM4-201ENST00000298454 HBBP68871 147 aa17.26■□□□□ 0.35
VSTM4-201ENST00000298454 ZNF738Q8NE65 137 aa17.26■□□□□ 0.35
VSTM4-201ENST00000298454 CLEC5AQ9NY25 188 aa17.26■□□□□ 0.35
VSTM4-201ENST00000298454 TP53TG3Q9ULZ0 132 aa17.26■□□□□ 0.35
VSTM4-201ENST00000298454 ANK3Q12955 4377 aaKnown RBP17.26■□□□□ 0.35
VSTM4-201ENST00000298454 Q6ZSV7 163 aa17.25■□□□□ 0.35
VSTM4-201ENST00000298454 TMEM189A5PLL7 270 aa17.25■□□□□ 0.35
VSTM4-201ENST00000298454 NUPR1O60356 82 aa17.25■□□□□ 0.35
VSTM4-201ENST00000298454 SYNJ2BPP57105 145 aa17.25■□□□□ 0.35
VSTM4-201ENST00000298454 TMEM78Q5T7P6 136 aa17.25■□□□□ 0.35
VSTM4-201ENST00000298454 AMBPP02760 352 aa17.24■□□□□ 0.35
VSTM4-201ENST00000298454 F2Z2F3 143 aa17.23■□□□□ 0.35
VSTM4-201ENST00000298454 SMIM6P0DI80 62 aa17.23■□□□□ 0.35
VSTM4-201ENST00000298454 ZNF138P52744 262 aa17.23■□□□□ 0.35
VSTM4-201ENST00000298454 C9orf47Q6ZRZ4 202 aa17.23■□□□□ 0.35
VSTM4-201ENST00000298454 HOXD3P31249 432 aaPredicted RBP17.23■□□□□ 0.35
VSTM4-201ENST00000298454 BMI1P35226 326 aa17.23■□□□□ 0.35
VSTM4-201ENST00000298454 DEFB1P60022 68 aa17.23■□□□□ 0.35
VSTM4-201ENST00000298454 PACRGQ96M98 296 aaPredicted RBP17.23■□□□□ 0.35
VSTM4-201ENST00000298454 A8MWP6 167 aa17.22■□□□□ 0.35
VSTM4-201ENST00000298454 SRIP30626 198 aa17.22■□□□□ 0.35
VSTM4-201ENST00000298454 TCTEX1D4Q5JR98 221 aa17.22■□□□□ 0.35
VSTM4-201ENST00000298454 TPPP3Q9BW30 176 aa17.22■□□□□ 0.35
VSTM4-201ENST00000298454 ARMS2P0C7Q2 107 aa17.22■□□□□ 0.35
VSTM4-201ENST00000298454 DEFB136Q30KP8 78 aa17.22■□□□□ 0.35
VSTM4-201ENST00000298454 SMR3AQ99954 134 aa17.22■□□□□ 0.35
VSTM4-201ENST00000298454 LINC00310P59036 64 aa17.21■□□□□ 0.35
VSTM4-201ENST00000298454 HIST2H2BDQ6DRA6 164 aa17.21■□□□□ 0.35
VSTM4-201ENST00000298454 HAX1O00165 279 aa17.21■□□□□ 0.34
VSTM4-201ENST00000298454 Q0VG73 95 aa17.21■□□□□ 0.34
VSTM4-201ENST00000298454 REC114Q7Z4M0 266 aa17.21■□□□□ 0.34
VSTM4-201ENST00000298454 FABP5P3A8MUU1 101 aa17.2■□□□□ 0.34
VSTM4-201ENST00000298454 PYY3Q5JQD4 70 aa17.2■□□□□ 0.34
VSTM4-201ENST00000298454 ZNF575Q86XF7 245 aa17.2■□□□□ 0.34
VSTM4-201ENST00000298454 A0A1B0GUT8 65 aa17.19■□□□□ 0.34
VSTM4-201ENST00000298454 BAGE3Q86Y29 109 aa17.19■□□□□ 0.34
VSTM4-201ENST00000298454 MYO9AB2RTY4 2548 aa17.19■□□□□ 0.34
VSTM4-201ENST00000298454 LGALS9O00182 355 aa17.19■□□□□ 0.34
VSTM4-201ENST00000298454 SERF1AO75920 110 aa17.19■□□□□ 0.34
VSTM4-201ENST00000298454 WFDC3Q8IUB2 231 aa17.19■□□□□ 0.34
VSTM4-201ENST00000298454 F6UB75 175 aa17.18■□□□□ 0.34
VSTM4-201ENST00000298454 ORM1P02763 201 aa17.18■□□□□ 0.34
VSTM4-201ENST00000298454 DCANP1Q8TF63 244 aa17.18■□□□□ 0.34
VSTM4-201ENST00000298454 OVOL1O14753 267 aa17.18■□□□□ 0.34
VSTM4-201ENST00000298454 SLURP1P55000 103 aa17.18■□□□□ 0.34
VSTM4-201ENST00000298454 KHDC1LQ5JSQ8 128 aa17.18■□□□□ 0.34
VSTM4-201ENST00000298454 Q6AWC8 147 aa17.18■□□□□ 0.34
VSTM4-201ENST00000298454 LYZL1Q6UWQ5 148 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms