RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 IGHV1-8P0DP01 117 aa9.82□□□□□ -0.84
PCF11-201ENST00000298281 C1QL4Q86Z23 238 aa9.82□□□□□ -0.84
PCF11-201ENST00000298281 STPG4Q8N801 248 aa9.82□□□□□ -0.84
PCF11-201ENST00000298281 ZNRF2Q8NHG8 242 aa9.82□□□□□ -0.84
PCF11-201ENST00000298281 RFNGQ9Y644 331 aa9.82□□□□□ -0.84
PCF11-201ENST00000298281 GAGE12HA6NDE8 117 aa9.82□□□□□ -0.84
PCF11-201ENST00000298281 KIR3DS1Q14943 382 aa9.82□□□□□ -0.84
PCF11-201ENST00000298281 SPRR3Q9UBC9 169 aa9.82□□□□□ -0.84
PCF11-201ENST00000298281 PTPRQQ9UMZ3 2332 aa9.82□□□□□ -0.84
PCF11-201ENST00000298281 IGFL4Q6B9Z1 124 aa9.82□□□□□ -0.84
PCF11-201ENST00000298281 TREML4Q6UXN2 200 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 CFHR4Q92496 578 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 LYZL4Q96KX0 146 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 LY96Q9Y6Y9 160 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 I3L3M4 83 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 A8MWP6 167 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 IL17RELQ6ZVW7 336 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 EML5Q05BV3 1969 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 CRYGSP22914 178 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 UTF1Q5T230 341 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 TMEM178BH3BS89 294 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 NTN3O00634 580 aaPredicted RBP9.81□□□□□ -0.84
PCF11-201ENST00000298281 FGF16O43320 207 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 IGKV1D-12P01611 117 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 A0A1B0GW64 132 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 FGF6P10767 208 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 MST1LQ2TV78 715 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 LRRC37AA6NMS7 1700 aa9.81□□□□□ -0.84
PCF11-201ENST00000298281 F6UB75 175 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 HLA-DRB4P13762 266 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 SP5Q6BEB4 398 aaPredicted RBP9.8□□□□□ -0.84
PCF11-201ENST00000298281 RHPN1-AS1Q9BWJ2 59 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 HLA-DRB4X5D2U9 266 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 IGHV1-3A0A0C4DH29 117 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 HIST1H2BKO60814 126 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 HIST1H2BJP06899 126 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 HIST1H2BOP23527 126 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 HIST1H2BBP33778 126 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 HIST1H2BDP58876 126 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 HIST1H2BCP62807 126 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 HIST2H2BEQ16778 126 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 C5orf64Q2M2E5 130 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.8□□□□□ -0.84
PCF11-201ENST00000298281 RPRMLQ8N4K4 120 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 HIST1H2BHQ93079 126 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 HIST1H2BNQ99877 126 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 HIST1H2BMQ99879 126 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 LINC01551Q86U37 167 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 ORMDL1Q9P0S3 153 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 OTOGLQ3ZCN5 2332 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 FNDC10F2Z333 226 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 TMEM105Q8N8V8 129 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 SPANXA1Q9NS26 97 aa9.8□□□□□ -0.84
PCF11-201ENST00000298281 CRYBA4P53673 196 aa9.79□□□□□ -0.84
PCF11-201ENST00000298281 ATG2AQ2TAZ0 1938 aa9.79□□□□□ -0.84
PCF11-201ENST00000298281 SIGLEC9Q9Y336 463 aa9.79□□□□□ -0.84
PCF11-201ENST00000298281 OBSL1O75147 1896 aa9.79□□□□□ -0.84
PCF11-201ENST00000298281 TMEM200BQ69YZ2 307 aa9.79□□□□□ -0.84
PCF11-201ENST00000298281 LY6G6FQ5SQ64 297 aa9.79□□□□□ -0.84
PCF11-201ENST00000298281 TP53TG1Q9Y2A0 90 aa9.79□□□□□ -0.84
PCF11-201ENST00000298281 LCTP09848 1927 aa9.79□□□□□ -0.84
PCF11-201ENST00000298281 GATA3P23771 443 aa9.79□□□□□ -0.84
PCF11-201ENST00000298281 VWCEQ96DN2 955 aa9.79□□□□□ -0.84
PCF11-201ENST00000298281 DAZ1Q9NQZ3 744 aaKnown RBP9.79□□□□□ -0.84
PCF11-201ENST00000298281 NEGR1Q7Z3B1 354 aa9.78□□□□□ -0.84
PCF11-201ENST00000298281 MUSTN1Q8IVN3 82 aa9.78□□□□□ -0.84
PCF11-201ENST00000298281 IGFBPL1Q8WX77 278 aa9.78□□□□□ -0.84
PCF11-201ENST00000298281 UBE2CO00762 179 aa9.78□□□□□ -0.84
PCF11-201ENST00000298281 LMO1P25800 156 aa9.78□□□□□ -0.84
PCF11-201ENST00000298281 MPLKIPQ8TAP9 179 aa9.78□□□□□ -0.84
PCF11-201ENST00000298281 TICRRQ7Z2Z1 1910 aa9.78□□□□□ -0.84
PCF11-201ENST00000298281 KLK5Q9Y337 293 aaPredicted RBP9.78□□□□□ -0.84
PCF11-201ENST00000298281 TRBV6-6A0A0A6YYG2 114 aa9.78□□□□□ -0.84
PCF11-201ENST00000298281 J3QRE1 110 aa9.78□□□□□ -0.84
PCF11-201ENST00000298281 PDE6HQ13956 83 aa9.78□□□□□ -0.84
PCF11-201ENST00000298281 ADAMTS9Q9P2N4 1935 aa9.78□□□□□ -0.84
PCF11-201ENST00000298281 LHFPL1Q86WI0 220 aa9.77□□□□□ -0.84
PCF11-201ENST00000298281 PAQR4Q8N4S7 273 aaPredicted RBP9.77□□□□□ -0.84
PCF11-201ENST00000298281 ETV2O00321 342 aaPredicted RBP9.77□□□□□ -0.85
PCF11-201ENST00000298281 FOXF2Q12947 444 aa9.77□□□□□ -0.85
PCF11-201ENST00000298281 RNASE13Q5GAN3 156 aaKnown RBP9.77□□□□□ -0.85
PCF11-201ENST00000298281 AGMATQ9BSE5 352 aa9.77□□□□□ -0.85
PCF11-201ENST00000298281 ZNF362Q5T0B9 420 aaPredicted RBP9.77□□□□□ -0.85
PCF11-201ENST00000298281 SAA4P35542 130 aa9.77□□□□□ -0.85
PCF11-201ENST00000298281 IGHV1-24A0A0C4DH33 117 aa9.77□□□□□ -0.85
PCF11-201ENST00000298281 BTCP35070 178 aa9.77□□□□□ -0.85
PCF11-201ENST00000298281 GTSF1Q8WW33 167 aa9.77□□□□□ -0.85
PCF11-201ENST00000298281 SPG11Q96JI7 2443 aa9.77□□□□□ -0.85
PCF11-201ENST00000298281 F8W735 103 aaPredicted RBP9.76□□□□□ -0.85
PCF11-201ENST00000298281 H0YIZ8 118 aa9.76□□□□□ -0.85
PCF11-201ENST00000298281 GGNQ86UU5 652 aa9.76□□□□□ -0.85
PCF11-201ENST00000298281 RUSC1-AS1Q66K80 236 aa9.76□□□□□ -0.85
PCF11-201ENST00000298281 HIST1H2BLQ99880 126 aa9.76□□□□□ -0.85
PCF11-201ENST00000298281 SLAQ13239 276 aa9.76□□□□□ -0.85
PCF11-201ENST00000298281 UNQ6494/PRO21346Q6UXR6 183 aa9.76□□□□□ -0.85
PCF11-201ENST00000298281 TMEM14EPQ6UXP3 125 aa9.76□□□□□ -0.85
PCF11-201ENST00000298281 VSIG2Q96IQ7 327 aa9.76□□□□□ -0.85
PCF11-201ENST00000298281 BPESC1Q9GZL8 116 aa9.76□□□□□ -0.85
PCF11-201ENST00000298281 MRPL36Q9P0J6 103 aaKnown RBP9.76□□□□□ -0.85
PCF11-201ENST00000298281 MRPL27Q9P0M9 148 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms