RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 FAM24BQ8N5W8 94 aa11.96□□□□□ -0.49
NPM1-201ENST00000296930 OR11H2Q8NH07 326 aa11.96□□□□□ -0.49
NPM1-201ENST00000296930 NKX6-2Q9C056 277 aaPredicted RBP11.96□□□□□ -0.49
NPM1-201ENST00000296930 AGRNO00468 2067 aa11.96□□□□□ -0.5
NPM1-201ENST00000296930 SCO2A0A1W2PP80 73 aa11.95□□□□□ -0.5
NPM1-201ENST00000296930 TMEM250H0YL14 139 aa11.95□□□□□ -0.5
NPM1-201ENST00000296930 PDE6DO43924 150 aa11.95□□□□□ -0.5
NPM1-201ENST00000296930 LY6G6CO95867 125 aa11.95□□□□□ -0.5
NPM1-201ENST00000296930 LYPD1Q8N2G4 141 aa11.95□□□□□ -0.5
NPM1-201ENST00000296930 EXOC3-AS1Q8N2X6 119 aa11.95□□□□□ -0.5
NPM1-201ENST00000296930 LINC00052Q96N35 136 aa11.95□□□□□ -0.5
NPM1-201ENST00000296930 C11orf68Q9H3H3 251 aaKnown RBP11.95□□□□□ -0.5
NPM1-201ENST00000296930 ZNF331Q9NQX6 463 aaPredicted RBP11.95□□□□□ -0.5
NPM1-201ENST00000296930 PGPA6NDG6 321 aa11.95□□□□□ -0.5
NPM1-201ENST00000296930 HELTA6NFD8 242 aa11.95□□□□□ -0.5
NPM1-201ENST00000296930 C11orf52Q96A22 123 aa11.95□□□□□ -0.5
NPM1-201ENST00000296930 OTORQ9NRC9 128 aa11.95□□□□□ -0.5
NPM1-201ENST00000296930 F6UZH7 168 aa11.94□□□□□ -0.5
NPM1-201ENST00000296930 MEOX2P50222 304 aa11.94□□□□□ -0.5
NPM1-201ENST00000296930 PHLDA1Q8WV24 401 aaPredicted RBP11.94□□□□□ -0.5
NPM1-201ENST00000296930 CEBPGP53567 150 aa11.93□□□□□ -0.5
NPM1-201ENST00000296930 PSG9Q00887 426 aa11.93□□□□□ -0.5
NPM1-201ENST00000296930 C5orf17Q8NAS9 161 aa11.93□□□□□ -0.5
NPM1-201ENST00000296930 DCANP1Q8TF63 244 aa11.93□□□□□ -0.5
NPM1-201ENST00000296930 SLC50A1Q9BRV3 221 aa11.93□□□□□ -0.5
NPM1-201ENST00000296930 NRN1Q9NPD7 142 aa11.93□□□□□ -0.5
NPM1-201ENST00000296930 KRBOX1C9JBD0 128 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 M0R3E3 92 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 SOCS3O14543 225 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 SLC25A5P05141 298 aaKnown RBP11.92□□□□□ -0.5
NPM1-201ENST00000296930 ZNF688P0C7X2 276 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 GNG5P63218 68 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 IGFL4Q6B9Z1 124 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 C11orf45Q8TAV5 145 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 TRAV8-2A0A0B4J237 113 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 HLA-DMBP28068 263 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 DMRTA1Q5VZB9 504 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 MORN3Q6PF18 240 aaPredicted RBP11.92□□□□□ -0.5
NPM1-201ENST00000296930 TRPT1Q86TN4 253 aaKnown RBP11.92□□□□□ -0.5
NPM1-201ENST00000296930 C2CD4CQ8TF44 421 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 TCEAL7Q9BRU2 100 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 DERL1Q9BUN8 251 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 SEC11CQ9BY50 192 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 AAMDCQ9H7C9 122 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 EPDR1Q9UM22 224 aa11.92□□□□□ -0.5
NPM1-201ENST00000296930 F8W036 122 aa11.91□□□□□ -0.5
NPM1-201ENST00000296930 SOHLH1Q5JUK2 328 aa11.91□□□□□ -0.5
NPM1-201ENST00000296930 C10orf91Q5T1B1 145 aa11.91□□□□□ -0.5
NPM1-201ENST00000296930 RPUSD4Q96CM3 377 aaKnown RBP11.91□□□□□ -0.5
NPM1-201ENST00000296930 PARLQ9H300 379 aa11.91□□□□□ -0.5
NPM1-201ENST00000296930 PEX7O00628 323 aa11.9□□□□□ -0.5
NPM1-201ENST00000296930 RNF182Q8N6D2 247 aa11.9□□□□□ -0.5
NPM1-201ENST00000296930 BIRC6Q9NR09 4857 aa11.9□□□□□ -0.5
NPM1-201ENST00000296930 KNCNA6PVL3 124 aa11.9□□□□□ -0.51
NPM1-201ENST00000296930 TCRAP04437 139 aa11.9□□□□□ -0.51
NPM1-201ENST00000296930 S100A1P23297 94 aa11.9□□□□□ -0.51
NPM1-201ENST00000296930 NANOS2P60321 138 aaKnown RBP11.9□□□□□ -0.51
NPM1-201ENST00000296930 CMTM2Q8TAZ6 248 aa11.9□□□□□ -0.51
NPM1-201ENST00000296930 HIST1H2BAQ96A08 127 aa11.9□□□□□ -0.51
NPM1-201ENST00000296930 C16orf92Q96LL3 132 aa11.9□□□□□ -0.51
NPM1-201ENST00000296930 ATG101Q9BSB4 218 aa11.9□□□□□ -0.51
NPM1-201ENST00000296930 RPH3ALQ9UNE2 315 aa11.9□□□□□ -0.51
NPM1-201ENST00000296930 CARHSP1Q9Y2V2 147 aaKnown RBP11.9□□□□□ -0.51
NPM1-201ENST00000296930 GIG44P09565 113 aaPredicted RBP11.89□□□□□ -0.51
NPM1-201ENST00000296930 PRB4P10163 310 aaPredicted RBP11.89□□□□□ -0.51
NPM1-201ENST00000296930 ACTL10Q5JWF8 245 aa11.89□□□□□ -0.51
NPM1-201ENST00000296930 DEFB4AO15263 64 aa11.88□□□□□ -0.51
NPM1-201ENST00000296930 SNRPD3P62318 126 aaKnown RBP11.88□□□□□ -0.51
NPM1-201ENST00000296930 ZNF674Q2M3X9 581 aa11.88□□□□□ -0.51
NPM1-201ENST00000296930 PSMG4Q5JS54 123 aa11.88□□□□□ -0.51
NPM1-201ENST00000296930 C20orf173Q96LM9 149 aa11.88□□□□□ -0.51
NPM1-201ENST00000296930 LINC00479Q96M42 142 aa11.88□□□□□ -0.51
NPM1-201ENST00000296930 SMIM7Q9BQ49 75 aa11.88□□□□□ -0.51
NPM1-201ENST00000296930 TRBV20OR9-2A0A075B6H5 130 aa11.87□□□□□ -0.51
NPM1-201ENST00000296930 ZNF727A8MUV8 499 aa11.87□□□□□ -0.51
NPM1-201ENST00000296930 ZNF705FA8MVS1 300 aaPredicted RBP11.87□□□□□ -0.51
NPM1-201ENST00000296930 DIRC3C9JPN6 131 aa11.87□□□□□ -0.51
NPM1-201ENST00000296930 ISLRO14498 428 aa11.87□□□□□ -0.51
NPM1-201ENST00000296930 AKR1C3P42330 323 aa11.87□□□□□ -0.51
NPM1-201ENST00000296930 RPL35P42766 123 aaKnown RBP11.87□□□□□ -0.51
NPM1-201ENST00000296930 ARL6IP6Q8N6S5 226 aa11.87□□□□□ -0.51
NPM1-201ENST00000296930 Q8NAQ8 132 aa11.87□□□□□ -0.51
NPM1-201ENST00000296930 PRELID1Q9Y255 219 aa11.87□□□□□ -0.51
NPM1-201ENST00000296930 MIFP14174 115 aa11.87□□□□□ -0.51
NPM1-201ENST00000296930 PSG3Q16557 428 aa11.87□□□□□ -0.51
NPM1-201ENST00000296930 GOLT1AQ6ZVE7 132 aa11.87□□□□□ -0.51
NPM1-201ENST00000296930 MRPL53Q96EL3 112 aaKnown RBP11.87□□□□□ -0.51
NPM1-201ENST00000296930 CLEC5AQ9NY25 188 aa11.87□□□□□ -0.51
NPM1-201ENST00000296930 TRAV34A0A0B4J273 112 aa11.86□□□□□ -0.51
NPM1-201ENST00000296930 APOC3P02656 99 aa11.86□□□□□ -0.51
NPM1-201ENST00000296930 CSN1S1P47710 185 aa11.86□□□□□ -0.51
NPM1-201ENST00000296930 FAM74A3Q4VXF1 159 aa11.86□□□□□ -0.51
NPM1-201ENST00000296930 SAMD13Q5VXD3 122 aa11.86□□□□□ -0.51
NPM1-201ENST00000296930 LGALS9CQ6DKI2 356 aa11.86□□□□□ -0.51
NPM1-201ENST00000296930 KLF12Q9Y4X4 402 aa11.86□□□□□ -0.51
NPM1-201ENST00000296930 PRAC2D3DTV9 90 aa11.85□□□□□ -0.51
NPM1-201ENST00000296930 CNN1P51911 297 aaKnown RBP11.85□□□□□ -0.51
NPM1-201ENST00000296930 IGKV2-40A0A087WW87 121 aaPredicted RBP11.84□□□□□ -0.51
NPM1-201ENST00000296930 TRAV8-1A0A0A6YYK1 113 aa11.84□□□□□ -0.51
NPM1-201ENST00000296930 IGHV4-28A0A0C4DH34 117 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms